Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1664
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 2.8
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 2.8
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 29 2.8
AL132952-2|CAB63380.1| 190|Caenorhabditis elegans Hypothetical ... 29 2.8
U00049-2|AAC47052.2| 327|Caenorhabditis elegans Serpentine rece... 29 4.9
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 28 6.4
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 28 6.4
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 28 6.4
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 28 6.4
Z54235-3|CAA90973.2| 288|Caenorhabditis elegans Hypothetical pr... 28 8.5
U53153-2|AAQ91899.1| 422|Caenorhabditis elegans Hypothetical pr... 28 8.5
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical
protein B0244.6 protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = -1
Query: 226 LTCDIFTINYLCNIYFLFYFLPVALSVFYTTLR*NYVLIL 107
++C +FTI + N+YF+ LP+ L + ++T + YV ++
Sbjct: 648 ISCILFTIAGILNVYFMTIVLPLYLKMSHSTQK-RYVFVV 686
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 709 SEVS*RSACLGALSESNPTVVSVTTTEPLDLSAETAPPTHIFGTACEFNTTRVGEWSQPV 530
+E + S+ ++ PT V+ TTT P ++ T T T+ + TT VG + V
Sbjct: 526 TETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTHVGAPASSV 585
Query: 529 A-VSYD 515
A V++D
Sbjct: 586 ASVAHD 591
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 709 SEVS*RSACLGALSESNPTVVSVTTTEPLDLSAETAPPTHIFGTACEFNTTRVGEWSQPV 530
+E + S+ ++ PT V+ TTT P ++ T T T+ + TT VG + V
Sbjct: 367 TETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTHVGAPASSV 426
Query: 529 A-VSYD 515
A V++D
Sbjct: 427 ASVAHD 432
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 709 SEVS*RSACLGALSESNPTVVSVTTTEPLDLSAETAPPTHIFGTACEFNTTRVGEWSQPV 530
+E + S+ ++ PT V+ TTT P ++ T T T+ + TT VG + V
Sbjct: 407 TETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTHVGAPASSV 466
Query: 529 A-VSYD 515
A V++D
Sbjct: 467 ASVAHD 472
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 241 ECYNGLTCDIFTINYLCNIYFLFYFLPVALSVFYTTL 131
+ YNG C NI+F F+F+ A S+F+ T+
Sbjct: 196 QSYNGKYCLAERYQISDNIHFYFFFIRFASSIFFFTI 232
>AL132952-2|CAB63380.1| 190|Caenorhabditis elegans Hypothetical
protein Y51H4A.2 protein.
Length = 190
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 750 FFLFETMFTNGVCFQKFLSGAHVLERFQKATPRSLASQLPSPL 622
FFLF+ M+ N V F S +K TP L +P+PL
Sbjct: 127 FFLFDKMYKNEVELSYFKSSIFCTFFPKKITPFRLLGDIPAPL 169
>U00049-2|AAC47052.2| 327|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 2 protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 200 LSLQHLFFILFLTSCIICFLYYIK 129
L L+ F+ILF+ SCI CF ++
Sbjct: 62 LYLKQSFYILFIMSCIACFTLVVQ 85
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 411 IPIPVPTSTAKS*CNEKSGLSHTPLPAKLCNRKSRRHESALTSRQ 277
IPIP P + NE S H P K C +K+ + L + Q
Sbjct: 88 IPIPPPATNLTCPVNEVSNECHNPCTEKKCPQKNAPQVNCLMACQ 132
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 411 IPIPVPTSTAKS*CNEKSGLSHTPLPAKLCNRKSRRHESALTSRQ 277
IPIP P + NE S H P K C +K+ + L + Q
Sbjct: 88 IPIPPPATNLTCPVNEVSNECHNPCTEKKCPQKNAPQVNCLMACQ 132
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 411 IPIPVPTSTAKS*CNEKSGLSHTPLPAKLCNRKSRRHESALTSRQ 277
IPIP P + NE S H P K C +K+ + L + Q
Sbjct: 88 IPIPPPATNLTCPVNEVSNECHNPCTEKKCPQKNAPQVNCLMACQ 132
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 411 IPIPVPTSTAKS*CNEKSGLSHTPLPAKLCNRKSRRHESALTSRQ 277
IPIP P + NE S H P K C +K+ + L + Q
Sbjct: 88 IPIPPPATNLTCPVNEVSNECHNPCTEKKCPQKNAPQVNCLMACQ 132
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
protein K04B12.1 protein.
Length = 1764
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 658 PTVVSVTTTEPLDLSAETAPPTHIFGTACEFNTT 557
P++VSV ++ P+ + PP F C+F T+
Sbjct: 494 PSIVSVNSSTPISFNIHHLPPPVGFTYRCQFGTS 527
>Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical
protein R53.3b protein.
Length = 322
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 679 GALSESNPTVVSVTTTEPLDLSAETAPPT 593
G SES+PT TTEP+DL+A PP+
Sbjct: 85 GHASESSPT-----TTEPVDLTATPKPPS 108
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 679 GALSESNPTVVSVTTTEPLDLSAETAPPT 593
G SES+PT TTEP+DL+A PP+
Sbjct: 306 GHASESSPT-----TTEPVDLTATPKPPS 329
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 679 GALSESNPTVVSVTTTEPLDLSAETAPPT 593
G SES+PT TTEP+DL+A PP+
Sbjct: 85 GHASESSPT-----TTEPVDLTATPKPPS 108
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 679 GALSESNPTVVSVTTTEPLDLSAETAPPT 593
G SES+PT TTEP+DL+A PP+
Sbjct: 306 GHASESSPT-----TTEPVDLTATPKPPS 329
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 658 PTVVSVTTTEPLDLSAETAPPTHIFGTACEFNTT 557
P++VSV ++ P+ + PP F C+F T+
Sbjct: 496 PSIVSVNSSTPISFNIHHLPPPVGFTYRCQFGTS 529
>Z54235-3|CAA90973.2| 288|Caenorhabditis elegans Hypothetical
protein C09G9.3 protein.
Length = 288
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -1
Query: 688 ACLGALSESNPTVVSVTTTEPLDLSAETAPPTHIFGTACEFNTTR 554
ACL + + P+ TTT+P + T PT G T R
Sbjct: 63 ACLQTIPSTTPSPTGSTTTDPTVTTTTTVVPTGCCGEVIYLPTPR 107
>U53153-2|AAQ91899.1| 422|Caenorhabditis elegans Hypothetical
protein T19A5.3b protein.
Length = 422
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 664 SNPTVVSVTTTEPLDLSAETAPPTHIFGTACEF 566
S P V S +TTE + SAET P T++ T ++
Sbjct: 24 SRPIVTS-STTESAESSAETVPTTYVVQTLTKY 55
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 664 SNPTVVSVTTTEPLDLSAETAPPTHIFGTACEF 566
S P V S +TTE + SAET P T++ T ++
Sbjct: 92 SRPIVTS-STTESAESSAETVPTTYVVQTLTKY 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,200,087
Number of Sequences: 27780
Number of extensions: 367771
Number of successful extensions: 1076
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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