Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1663
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.84 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.84 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.9  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 243 SMCNTHFLRSKHKQIQEKLAKAAKDATD 326
           S+C T  L + H+++QE++ K  +   D
Sbjct: 306 SICYTLMLLANHREVQEEILKEMEAVLD 333


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 243 SMCNTHFLRSKHKQIQEKLAKAAKDATD 326
           S+C T  L + H+++QE++ K  +   D
Sbjct: 306 SICYTLMLLANHREVQEEILKEMEAVLD 333


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +1

Query: 238 IQACVTHIFYAPNISRYKKNWQRLQKMPLILYNLKSLVNISIK 366
           +Q C+  +  A NIS      ++ Q+   ++ NLK +     K
Sbjct: 66  VQTCLDFLLLALNISTILTTVRKQQQWAQLIQNLKVVATTKTK 108


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 512 KTENVDDNFRIDNNV 468
           KTE + D+++ DN++
Sbjct: 272 KTETITDSYKFDNDI 286


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 409 VSFLIIRSFESSDLFLLKY*PNSL 338
           +S++++ SF S  LF+L    NSL
Sbjct: 287 ISYIVLMSFASDLLFILIQLFNSL 310


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 409 VSFLIIRSFESSDLFLLKY*PNSL 338
           +S++++ SF S  LF+L    NSL
Sbjct: 287 ISYIVLMSFASDLLFILIQLFNSL 310


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 642 FNVITGVSFIAVSCFKVTLWLSI*SIVNLTLQAIHFRVSF 523
           +  +T +  +      VTLWLS  + + LTL+   + + F
Sbjct: 127 YKELTDIKLVLNILSDVTLWLSNVNSLTLTLKRKKWNLLF 166


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 642 FNVITGVSFIAVSCFKVTLWLSI*SIVNLTLQAIHFRVSF 523
           +  +T +  +      VTLWLS  + + LTL+   + + F
Sbjct: 53  YKELTDIKLVLNILSDVTLWLSNVNSLTLTLKRKKWNLLF 92


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 409 VSFLIIRSFESSDLFLLKY*PNSL 338
           +S++++ SF S  LF+L    NSL
Sbjct: 287 ISYIVLMSFASDLLFILIQLFNSL 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,779
Number of Sequences: 336
Number of extensions: 3829
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)