Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1663
         (743 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112926-1|AAI12927.1| 1306|Homo sapiens ARHGEF10 protein protein.     33   1.4  
BC040474-1|AAH40474.1|  380|Homo sapiens ARHGEF10 protein protein.     33   1.4  
BC036809-1|AAH36809.1|  660|Homo sapiens ARHGEF10 protein protein.     33   1.4  
BC150171-1|AAI50172.1| 1298|Homo sapiens ZNF536 protein protein.       31   4.4  
BC146757-1|AAI46758.1| 1300|Homo sapiens zinc finger protein 536...    31   4.4  
BC132722-1|AAI32723.1| 1300|Homo sapiens zinc finger protein 536...    31   4.4  
BC132720-1|AAI32721.1| 1300|Homo sapiens zinc finger protein 536...    31   4.4  
AB002388-1|BAA20844.2| 1312|Homo sapiens KIAA0390 protein.             31   4.4  

>BC112926-1|AAI12927.1| 1306|Homo sapiens ARHGEF10 protein protein.
          Length = 1306

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = +3

Query: 261 FLRSKHKQIQEKLAKAAKDAT-DIVQ----LKEFGQYFNKNKSELSKDLIIKKETMEQFI 425
           FLRS HK+  +KL KAAKD T D ++      + G+ F + KS +++D    + ++E+  
Sbjct: 274 FLRSNHKKQMQKLVKAAKDGTKDGLERTRAAVKRGRSFIRTKSLIAQD---HRSSLEEEQ 330

Query: 426 NNFYSIE 446
           N F  ++
Sbjct: 331 NFFIDVD 337


>BC040474-1|AAH40474.1|  380|Homo sapiens ARHGEF10 protein protein.
          Length = 380

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = +3

Query: 261 FLRSKHKQIQEKLAKAAKDAT-DIVQ----LKEFGQYFNKNKSELSKDLIIKKETMEQFI 425
           FLRS HK+  +KL KAAKD T D ++      + G+ F + KS +++D    + ++E+  
Sbjct: 68  FLRSNHKKQMQKLVKAAKDGTKDGLERTRAAVKRGRSFIRTKSLIAQD---HRSSLEEEQ 124

Query: 426 NNFYSIE 446
           N F  ++
Sbjct: 125 NLFIDVD 131


>BC036809-1|AAH36809.1|  660|Homo sapiens ARHGEF10 protein protein.
          Length = 660

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = +3

Query: 261 FLRSKHKQIQEKLAKAAKDAT-DIVQ----LKEFGQYFNKNKSELSKDLIIKKETMEQFI 425
           FLRS HK+  +KL KAAKD T D ++      + G+ F + KS +++D    + ++E+  
Sbjct: 50  FLRSNHKKQMQKLVKAAKDGTKDGLERTRAAVKRGRSFIRTKSLIAQD---HRSSLEEEQ 106

Query: 426 NNFYSIE 446
           N F  ++
Sbjct: 107 NLFIDVD 113


>BC150171-1|AAI50172.1| 1298|Homo sapiens ZNF536 protein protein.
          Length = 1298

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 55  KCILCDIQCDDMEDHISNADHLAKMLQVEVEFRIYNGLYRMMDNSFQCLTCNEVF 219
           KC LCD      E+ IS+ +  A +     + +  NG      N F+C  C +VF
Sbjct: 301 KCTLCDFAASQEEELISHVEK-AHITAESAQGQGPNGGGEQSANEFRCEVCGQVF 354


>BC146757-1|AAI46758.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 55  KCILCDIQCDDMEDHISNADHLAKMLQVEVEFRIYNGLYRMMDNSFQCLTCNEVF 219
           KC LCD      E+ IS+ +  A +     + +  NG      N F+C  C +VF
Sbjct: 301 KCTLCDFAASQEEELISHVEK-AHITAESAQGQGPNGGGEQSANEFRCEVCGQVF 354


>BC132722-1|AAI32723.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 55  KCILCDIQCDDMEDHISNADHLAKMLQVEVEFRIYNGLYRMMDNSFQCLTCNEVF 219
           KC LCD      E+ IS+ +  A +     + +  NG      N F+C  C +VF
Sbjct: 301 KCTLCDFAASQEEELISHVEK-AHITAESAQGQGPNGGGEQSANEFRCEVCGQVF 354


>BC132720-1|AAI32721.1| 1300|Homo sapiens zinc finger protein 536
           protein.
          Length = 1300

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 55  KCILCDIQCDDMEDHISNADHLAKMLQVEVEFRIYNGLYRMMDNSFQCLTCNEVF 219
           KC LCD      E+ IS+ +  A +     + +  NG      N F+C  C +VF
Sbjct: 301 KCTLCDFAASQEEELISHVEK-AHITAESAQGQGPNGGGEQSANEFRCEVCGQVF 354


>AB002388-1|BAA20844.2| 1312|Homo sapiens KIAA0390 protein.
          Length = 1312

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 55  KCILCDIQCDDMEDHISNADHLAKMLQVEVEFRIYNGLYRMMDNSFQCLTCNEVF 219
           KC LCD      E+ IS+ +  A +     + +  NG      N F+C  C +VF
Sbjct: 313 KCTLCDFAASQEEELISHVEK-AHITAESAQGQGPNGGGEQSANEFRCEVCGQVF 366


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,517,492
Number of Sequences: 237096
Number of extensions: 2124889
Number of successful extensions: 8658
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8653
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)