Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1662
(771 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 175 3e-44
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 164 6e-41
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 6e-40
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 144 7e-35
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 134 1e-31
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 124 6e-29
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 120 1e-27
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 104 9e-23
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 95 4e-20
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 84 1e-16
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 76 3e-14
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 70 2e-12
SB_214| Best HMM Match : Arf (HMM E-Value=0) 68 1e-11
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 67 2e-11
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 40 0.002
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 38 0.007
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 38 0.009
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 38 0.009
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 38 0.012
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 37 0.021
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 36 0.027
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 35 0.063
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 34 0.15
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 33 0.25
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.45
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 32 0.59
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 29 4.2
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 29 4.2
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 29 5.5
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 29 5.5
SB_54938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 29 5.5
SB_17079| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 175 bits (426), Expect = 3e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +1
Query: 256 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 435
PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+GEAREE
Sbjct: 47 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREE 106
Query: 436 LMRMLSEDELRDAVLLIFANKQDL 507
L RML+EDELRDAVLL+FANKQDL
Sbjct: 107 LNRMLNEDELRDAVLLVFANKQDL 130
Score = 101 bits (242), Expect = 6e-22
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3
Query: 510 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 653
NAMNAAEITDKLGLHSLRNR WYIQATCATSGDGLYEGLDWLSN LK+
Sbjct: 132 NAMNAAEITDKLGLHSLRNRQWYIQATCATSGDGLYEGLDWLSNTLKS 179
Score = 91.9 bits (218), Expect = 5e-19
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = +2
Query: 119 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPLL 265
MG MFA LF GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIP +
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 164 bits (399), Expect = 6e-41
Identities = 75/83 (90%), Positives = 79/83 (95%)
Frame = +1
Query: 253 NPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 432
+P GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER GEA+E
Sbjct: 495 SPVQGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKE 554
Query: 433 ELMRMLSEDELRDAVLLIFANKQ 501
EL RML+EDELRDAVLL+FANKQ
Sbjct: 555 ELSRMLAEDELRDAVLLVFANKQ 577
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 161 bits (391), Expect = 6e-40
Identities = 71/84 (84%), Positives = 80/84 (95%)
Frame = +1
Query: 256 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 435
PTIGFNVE+VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRER+ E++EE
Sbjct: 47 PTIGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEE 106
Query: 436 LMRMLSEDELRDAVLLIFANKQDL 507
L +ML EDEL+DAV+L+ ANKQDL
Sbjct: 107 LNKMLQEDELKDAVVLVMANKQDL 130
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +2
Query: 119 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPLL 265
MG ++LF LFGKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIP +
Sbjct: 1 MGLTISSLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
Score = 80.2 bits (189), Expect = 2e-15
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +3
Query: 510 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 647
NA++ +EIT+KLGL S+R+R WYIQA CAT G GLYEGLDWLSN+L
Sbjct: 132 NALSVSEITEKLGLQSIRDRQWYIQAACATQGTGLYEGLDWLSNEL 177
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 144 bits (349), Expect = 7e-35
Identities = 66/87 (75%), Positives = 74/87 (85%)
Frame = +1
Query: 247 NNNPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 426
N PTIGFNVE VEYKNI FTVWD+GGQDKIR LWR YFQ TQGLIFVVDSNDR+RI EA
Sbjct: 117 NTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEA 176
Query: 427 REELMRMLSEDELRDAVLLIFANKQDL 507
+EEL ++L E+EL+ A LL+ ANKQDL
Sbjct: 177 KEELFKLLKEEELKRAALLVLANKQDL 203
Score = 72.5 bits (170), Expect = 3e-13
Identities = 27/47 (57%), Positives = 40/47 (85%)
Frame = +3
Query: 510 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 650
++M+ E+++KL LH+LR+RNWYIQATCA G G+YEGL+WL+ Q++
Sbjct: 205 DSMSTTELSEKLSLHTLRSRNWYIQATCALKGQGVYEGLEWLAQQIQ 251
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +2
Query: 116 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPLL 265
KMGN +LF+ L GK E+R+LMVGLDAAGKTTILY LKL E V TIP +
Sbjct: 73 KMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTI 122
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 134 bits (323), Expect = 1e-31
Identities = 59/84 (70%), Positives = 71/84 (84%)
Frame = +1
Query: 256 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 435
PT+GFNVETV YKNISFTVWD+GGQDKIR LWR Y+Q QG+IFVVDS DRER EAR E
Sbjct: 26 PTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNE 85
Query: 436 LMRMLSEDELRDAVLLIFANKQDL 507
L ++L+E+EL+ +LL+ ANKQD+
Sbjct: 86 LHKLLAEEELQQVILLVIANKQDM 109
Score = 69.7 bits (163), Expect = 2e-12
Identities = 26/49 (53%), Positives = 39/49 (79%)
Frame = +3
Query: 507 ANAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 653
ANAM A+EI +KL L+ +R R W++Q+ CA G+GL+EGLDW++ Q++N
Sbjct: 110 ANAMTASEIREKLKLNEIRGRPWFVQSACAVKGEGLFEGLDWMATQIRN 158
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2
Query: 182 MVGLDAAGKTTILYKLKLGEIVTTIPLL 265
M+GLD AGKTTILY+LKL E+V+T+P L
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTL 28
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 124 bits (300), Expect = 6e-29
Identities = 56/85 (65%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 PTIGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 432
PTIGFNVET++ KN++ T+WDVGGQDKIRPLWRHYFQ T+GL+FVVDS+D R+ EA+E
Sbjct: 49 PTIGFNVETLQPTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKE 108
Query: 433 ELMRMLSEDELRDAVLLIFANKQDL 507
EL +L DE RD +++ ANKQDL
Sbjct: 109 ELHGVLDSDEFRDVPVVVVANKQDL 133
Score = 58.4 bits (135), Expect = 6e-09
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +2
Query: 155 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPLL 265
FG +++RI+M+GLDAAGKTTILYKLKL E V+TIP +
Sbjct: 15 FGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTI 51
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +3
Query: 510 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR*T 668
NA+ A E+ LGL + W++Q CAT+GDGLYE +D + +K+ ++ T
Sbjct: 135 NALKAGEMAKHLGLLQHKRNPWHVQEACATNGDGLYEAMDHMVRMVKDFHKRT 187
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 120 bits (290), Expect = 1e-27
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 NNNPTIGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 423
N PT+ FNVET+ KNI+F+VWD+GGQDKIR LWRHYFQ +G+IFVVDS D+ERI E
Sbjct: 136 NTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFE 195
Query: 424 AREELMRMLSEDELRDAVLLIFANKQDL 507
REEL R+L EL +++ ANKQDL
Sbjct: 196 VREELTRVLQHSELNGVPVVVVANKQDL 223
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 513 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLS 638
A+ ++ ++L L+ W IQ TCAT+GDGLYE ++ L+
Sbjct: 226 AIGPDKMAEELSLYKHTKNPWRIQGTCATAGDGLYEAMEALA 267
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 206 KTTILYKLKLGEIVTTIPLLA 268
KTTILYKLKL E V T+P +A
Sbjct: 122 KTTILYKLKLKETVNTVPTVA 142
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 104 bits (249), Expect = 9e-23
Identities = 45/64 (70%), Positives = 56/64 (87%)
Frame = +1
Query: 316 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFAN 495
DVGGQDKIRPLWRHYF +QGLIFVVD DR+RI EAR+EL R++++ E++D ++LIFAN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 496 KQDL 507
KQDL
Sbjct: 203 KQDL 206
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = -1
Query: 456 FAEHPHELFACLADTFPIVTVYYED*TLCILEIMPPQWSDFVLASNIPHSKTNVF 292
F L + L +T PI T+Y ED L +M PQ +DFVL+SNI K ++
Sbjct: 70 FQARTQGLCSGLINTVPICTIYNEDEALGTGVVMAPQRTDFVLSSNILRDKKKLY 124
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +1
Query: 247 NNNPTIGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 423
N PT FNVET+ +K I F VWD+GG+++ RPLW+ Y + T +I+VVDS ++ E
Sbjct: 48 NTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEE 107
Query: 424 AREELMRMLSEDELRDAVLLIFANKQD 504
AR+EL +L+ +L A +LIFANKQD
Sbjct: 108 ARDELFNLLNSAQLNGAPILIFANKQD 134
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +2
Query: 119 MGNMFANLFKG----LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPLLA 268
MGNMF F+ L K+ ++M+GLD +GKT+ILY+ K E V T+P A
Sbjct: 1 MGNMFVVSFRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTA 54
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 510 NAMNAAEITDKLGLHSLRNRN-WYIQATCATSGDGLYEGLDWLSNQL 647
NA+ EIT L LH L R+ W++Q A G+GL +GL LS +
Sbjct: 137 NAIPPREITHMLSLHDLNARHLWFVQPCSALLGEGLLDGLRALSEMI 183
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/63 (55%), Positives = 50/63 (79%)
Frame = +1
Query: 319 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANK 498
+ GQ IRP WR Y+ NT +I+VVDS D++RIG +++EL+ ML EDEL+ A+L++FANK
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANK 212
Query: 499 QDL 507
QD+
Sbjct: 213 QDM 215
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +3
Query: 513 AMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDW 632
AM+++E+++ LGL +L++R W I T A G+GL E ++W
Sbjct: 218 AMSSSEVSNALGLSALKSRTWAIFKTSAVKGEGLDEAMEW 257
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 76.2 bits (179), Expect = 3e-14
Identities = 28/84 (33%), Positives = 52/84 (61%)
Frame = +1
Query: 256 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 435
PT+GFN+ V N++ VWD+GGQ + R +W Y + ++++VD+ D +++ ++ E
Sbjct: 51 PTVGFNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNE 110
Query: 436 LMRMLSEDELRDAVLLIFANKQDL 507
L +L + +L +L+ NK+DL
Sbjct: 111 LHNLLEKPQLAGIPILVLGNKKDL 134
Score = 34.7 bits (76), Expect = 0.084
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 143 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGE 241
FK LF K+EM + +VGL +GKTT + + G+
Sbjct: 12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +1
Query: 259 TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL 438
T GFNV + ++ +W++GG +K R W ++ +TQ L++VVDS+D +R E+R+ L
Sbjct: 200 TEGFNVVCLTTDGLNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNL 259
Query: 439 MRMLSEDELRDAVLLIFANKQDL 507
+LS L +L+ A+KQDL
Sbjct: 260 KSLLSNSLLNGVPVLLVASKQDL 282
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 167 EMRILMVGLDAAGKTTILYKLKLGE 241
E RIL++GLD +GK+ L L G+
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGD 190
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 70.1 bits (164), Expect = 2e-12
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +1
Query: 265 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 375
GFNVETVE++++ FT+WDVGG K+RPLWRHY+ NTQ
Sbjct: 222 GFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNTQ 258
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/84 (33%), Positives = 51/84 (60%)
Frame = +1
Query: 256 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 435
PT+ E + + FT +D+GG + R +W+ YF G++F++D D ER+ E+++E
Sbjct: 6 PTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKE 65
Query: 436 LMRMLSEDELRDAVLLIFANKQDL 507
L +L++++L +LI NK D+
Sbjct: 66 LDSLLADEQLSSCPVLILGNKIDI 89
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 KNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRERIGEAREELMRMLSEDELR 468
KN+ F VWD+GGQ +R +HYF + GLI+VVDS D +R+ EA +L+ +L E +
Sbjct: 16 KNVHFAVWDIGGQPNLR---KHYFTDDKSGLIYVVDSTDIQRLNEA--QLLGILQEKVMV 70
Query: 469 DAVLLIFANKQDL 507
D +++ ANKQDL
Sbjct: 71 DVPVVVVANKQDL 83
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 510 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSN 641
N + A +I + LGL L+ ++Q A++GDGL E WL N
Sbjct: 85 NVLKAGDIAEHLGLLKLKRNPLHVQEAFASNGDGLCEAHKWLPN 128
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 64.5 bits (150), Expect = 9e-11
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 PTIGFNVETVEYKN-ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 432
PT GFN+++V+ K VWD+GGQ KIRP W++YF+NT L
Sbjct: 47 PTQGFNIKSVQSKGGFRLNVWDIGGQRKIRPYWKNYFENTDIL----------------- 89
Query: 433 ELMRMLSEDELRDAVLLIFANKQDL 507
EL +L E++L LL+FANKQDL
Sbjct: 90 ELDELLEEEKLIGVPLLVFANKQDL 114
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 510 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGL 614
NA AEI+ LGL+++R+R W IQ A +G+G+
Sbjct: 116 NAATPAEISSNLGLNTIRSRGWQIQGCSALTGEGV 150
Score = 35.5 bits (78), Expect = 0.048
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 164 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIP 259
+EMRIL++GLD +GKTTIL L +++ P
Sbjct: 16 REMRILLLGLDNSGKTTILKSLASEDVLHITP 47
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +1
Query: 310 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 459
+WDVGGQ +R WR+YF++T GLI+VVDS D+ R+ + + EL +L E+
Sbjct: 6 IWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = +1
Query: 280 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 459
TVE +WD GQ++ R L Y++ QG+I V D+N RE + E L +
Sbjct: 51 TVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYS 110
Query: 460 ELRDAVLLIFANKQD 504
+D V ++ NK D
Sbjct: 111 TKKDIVKMLVGNKID 125
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +1
Query: 247 NNNPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER 414
N PTIG F ++TV+ + + +WD GQ++ R + + Y+ N G+I D +++
Sbjct: 35 NQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKS 94
Query: 415 IGEAREELMRMLSEDELRDAVLLIFANKQDL 507
E+ + + + +D ++ I NK DL
Sbjct: 95 F-ESLPQWLDDTNRYTSKDVLIAIVGNKSDL 124
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 435
+ F + T+E K I +WD GQ++ R + Y++ G+I V D D+E ++
Sbjct: 64 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 123
Query: 436 LMRMLSEDELRDAVLLIFANKQDL 507
L + + L+ NK DL
Sbjct: 124 LQE-IDRYACENVNKLLVGNKCDL 146
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +1
Query: 247 NNNPTIG--FNVETVEYKN---ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 411
N++PT+G F+V +E K I +WD GQ++ R + Y++NT G + + D +R+
Sbjct: 41 NSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRD 100
Query: 412 RIGEAREELMRMLSEDELRDAVLLIFANKQD 504
+ E + V ++ +K D
Sbjct: 101 SFVNVMDWYKEAKQCVEEAEVVFMLVGHKID 131
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 44.8 bits (101), Expect = 8e-05
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Frame = +1
Query: 274 VET-VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRML 450
VET +K++ F ++DVGGQ R W H F+ +IF V + + + EE+ RM+
Sbjct: 185 VETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMM 244
Query: 451 SEDELRDAV----------LLIFANKQDL 507
+L D++ +++F NK+DL
Sbjct: 245 ESMKLFDSICNNKWFTDTSIILFLNKKDL 273
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +1
Query: 280 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 459
TV+ K I +WD GQ++ R L Y+++ G++ + D N+ E + + +SE
Sbjct: 51 TVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHL-SQWLEEVSEY 109
Query: 460 ELRDAVLLIFANKQDL 507
++ NK DL
Sbjct: 110 ACEGVNTILVGNKCDL 125
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 265 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL-- 438
G + V K++ +WD GQ++ R + R Y++ G + V D + RE L
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTD 192
Query: 439 MRMLSEDELRDAVLLIFANKQDL 507
R L+ + V+++ NK+DL
Sbjct: 193 ARTLASPNI---VIILVGNKKDL 212
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Frame = +1
Query: 256 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSND 405
PT G + + I F + DVGGQ R W H F+N ++F +V+S+
Sbjct: 179 PTSGIIEYPFDLETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDS 238
Query: 406 RERIGEAREELMRMLSEDELRDAVLLIFANKQDL 507
R+ E++ +++ +++ +++F NK+DL
Sbjct: 239 ENRMEESKALFRTIITYPWFQNSSIILFLNKKDL 272
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +1
Query: 247 NNNPTIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER 414
N++ T+G +V T + + WD GQ+K R + + Y++N +I V D +R
Sbjct: 39 NSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGT 98
Query: 415 IGEAREELMRMLSEDELRDAVLLIFANKQDL 507
+ LM + ++ + ++ NK DL
Sbjct: 99 FASIPQWLMNVQKYTN-KNILKVLVGNKTDL 128
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +2
Query: 113 FKMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLK 232
F+M + + L+K LF K E IL++GLD AGKTT+L ++K
Sbjct: 3 FEMFTLLSGLWKYLFQKDEYFILILGLDNAGKTTLLEQIK 42
Score = 36.3 bits (80), Expect = 0.027
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 259 TIGFNVETVEYKNISFTVWDVGGQDKIRPLW 351
T+G N+ + ++ WD+GGQ ++R LW
Sbjct: 60 TVGLNIGKITISHVKLMFWDLGGQQELRTLW 90
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 256 PTIG--FNVETVEYKN--ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 423
PTIG F +TV + + +WD GQ++ R L Y ++++ + V D + E
Sbjct: 194 PTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSF-E 252
Query: 424 AREELMRMLSEDELRDAVLLIFANKQD 504
+ + ++M+ ++ AV++I NK D
Sbjct: 253 SVGDWVKMVRDERGEKAVIIIVGNKMD 279
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +1
Query: 259 TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDR 408
T G +YK + F ++DVGGQ R W H F++ +I+ V +
Sbjct: 230 TTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEEDEST 289
Query: 409 ERIGEAREELMRMLSEDELRDAVLLIFANKQDL 507
R+ E+ + +++ D +++F NK+DL
Sbjct: 290 NRMEESLKLFESIINNKWFVDTSVILFLNKKDL 322
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +1
Query: 262 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 435
+ F + T+ + + +WD GQ++ R + Y++ T G+I V D + +
Sbjct: 12 VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRW 71
Query: 436 LMRMLSEDELRDAVLLIFANKQD 504
L + + D + ++ NK D
Sbjct: 72 LHEI--DQNCDDVIRILVGNKDD 92
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +1
Query: 259 TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDR 408
T G +YK + F ++DVGGQ R W H F++ +I+ V +
Sbjct: 182 TTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEEDEST 241
Query: 409 ERIGEAREELMRMLSEDELRDAVLLIFANKQDL 507
R+ E+ + +++ D +++F NK+DL
Sbjct: 242 NRMEESLKLFESIINNKWFVDTSVILFLNKKDL 274
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 516 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 647
++ +TD L ++ L NR W + C + DGL EG+ WL Q+
Sbjct: 179 LSCVRVTDMLQMNKL-NRPWQVNMMCVENLDGLLEGMTWLLKQV 221
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +1
Query: 283 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 462
VE K I VWD GQ++ R + Y++ G + V D ++ + L+ + +
Sbjct: 56 VEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHAD 115
Query: 463 LRDAVLLIFANKQDL 507
V+L+ NK DL
Sbjct: 116 PTIVVMLV-GNKCDL 129
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +1
Query: 259 TIG--FNVETV--EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 426
TIG F +TV + + F +WD GQ++ L Y++ Q I V D +++ A
Sbjct: 53 TIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARA 112
Query: 427 REELMRMLSEDELRDAVLLIFANKQDL 507
+ ++ L + V+ + NK DL
Sbjct: 113 K-TWVKELQRQASPNIVIALSGNKADL 138
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 NPTIG--FNVET--VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 420
N T+G F ++T V+ K + +WD GQ++ R + + YF+ G++ + D
Sbjct: 472 NSTLGVDFQMKTLVVDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFL 531
Query: 421 EAREELMRMLSEDELRDAVLLIFANKQDL 507
+ R + + + E + +++ NK D+
Sbjct: 532 DVR-DWVEAIEESCSKPVPIMLCGNKIDI 559
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 IGFNVETVEYKN--ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 435
+ F ++T+ I+ +WD GQ++ R + + YF+ G++ D + +
Sbjct: 931 VDFQIKTMNVNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLK-K 989
Query: 436 LMRMLSEDELRDAVLLIFANKQDL 507
M + E ++ NK DL
Sbjct: 990 WMVSVEEGAEEGVAKMVLGNKTDL 1013
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 262 IGFNVETV--EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 411
I F V+TV K + +WD GQ++ R + Y++ G I + D + E
Sbjct: 56 IDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEE 107
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 35.1 bits (77), Expect = 0.063
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = +1
Query: 292 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 471
K I +WD GQ++ + Y++ G++ V D + + + ++ + + D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI-SKWLKKIDDHANED 61
Query: 472 AVLLIFANKQDL 507
++ NK D+
Sbjct: 62 VKRMLVGNKCDM 73
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 292 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDE 462
+++ +WD GQ++ R + + Y+++ G+I D + + + E++ + E
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPE-- 150
Query: 463 LRDAVLLIFANKQDL 507
+A+ L+ NK+DL
Sbjct: 151 --NAIKLLVGNKKDL 163
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +1
Query: 283 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 462
V K F +WD GQ++ + L Y+++ I V D R +R L
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLR-PWIRELQRYG 62
Query: 463 LRDAVLLIFANKQD 504
+D V+ + NK D
Sbjct: 63 PQDIVIAVAGNKCD 76
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 310 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 477
V DVGGQ R W H+F ++F + + E E+ ML +L + +
Sbjct: 166 VIDVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLFEEI 221
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 31.9 bits (69), Expect = 0.59
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 292 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRM 447
+ I +WD GQ++ R L +F++ G + V D + R L ++
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQL 215
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 158 GKKEMRILMVGLDAAGKTTILYKLKL 235
G M++++VG +A GKTT++++L L
Sbjct: 548 GYYSMKLMLVGREAQGKTTLMHRLML 573
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 292 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 396
K I T+ D GQ++ + YF+ QG+ V D
Sbjct: 399 KKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFD 433
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 307 TVWDVGGQDKIRPLWRHYF 363
TV+D+GG KIR +W+ Y+
Sbjct: 7 TVYDLGGGAKIRGIWKDYY 25
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 376 GLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLI 486
G++FVVD+++RER+ E R L + LLI
Sbjct: 38 GVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 298 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 408
I F VWD GQ+K L Y+ Q I + D R
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR 117
>SB_54938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 593 RHFRRRTVRGSRLALQSAQERQPLNRMCANSQTNLIIER 709
RH +R V+ +LAL+ + +NR+ ++Q N I +R
Sbjct: 28 RHGKRHHVKNQQLALEMNSRVKNINRLTTDNQYNSITKR 66
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/92 (20%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 PTIG--FNVETVEYKN---ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 420
PTIG F ++T+++ I +W + GQ++ + R Y++ + + D + +
Sbjct: 49 PTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLD 108
Query: 421 EA---REELMRMLSEDELRDAVLLIFANKQDL 507
A +++L + ++ NK DL
Sbjct: 109 GAIKWKKDLDSKYKLHSRKPVPCILVGNKSDL 140
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 421 EAREELMRMLSEDELRDAVLLIFANKQDL 507
E + +L+ +++ EL+ A LLI ANKQD+
Sbjct: 34 ENKFQLVAIIAICELKQAALLILANKQDI 62
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 310 VWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDELRDAVL 480
+WD GQ++ + L +++ + V D N + + R+E + S + +
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 481 LIFANKQDL 507
++ NK DL
Sbjct: 61 VVLGNKIDL 69
>SB_17079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2537
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 587 RLDVPVTVAQRMQTQFVCYLGCVHCVCK 504
+LD P + ++ T F CYL + +CK
Sbjct: 2249 KLDAPANLLRQSTTAFTCYLHTLFQICK 2276
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 237 PNLSLYRIVVLPAASKPTINILIS-FLPKRPLNKFANIFPILNYY 106
P+ +L + + P S TI L+S +LP +PL + I +LN+Y
Sbjct: 455 PSNALKCLDIHPLPSSSTITFLLSHYLPPQPLPSSSAITFLLNHY 499
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 167 EMRILMVGLDAAGKTTILYKLKLGEI 244
E RI +VG + +GKTT+L K+ LGE+
Sbjct: 364 ESRIAVVGDNGSGKTTLL-KILLGEL 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,829,316
Number of Sequences: 59808
Number of extensions: 539482
Number of successful extensions: 1420
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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