Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1661
(836 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q86P20 Cluster: RE18590p; n=8; Endopterygota|Rep: RE185... 93 8e-18
UniRef50_A7REV9 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.019
UniRef50_A6EE97 Cluster: Iron-regulated ABC transporter, membran... 38 0.24
UniRef50_UPI0000E81E06 Cluster: PREDICTED: similar to CRP-ductin... 36 1.7
UniRef50_A3IWZ3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_A0WCN8 Cluster: Cation-transporting ATPase; n=1; Geobac... 36 1.7
UniRef50_A4M882 Cluster: Peptidase S41; n=1; Petrotoga mobilis S... 34 3.8
UniRef50_A7AW99 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q2JM42 Cluster: Trypsin domain lipoprotein; n=2; Synech... 34 5.1
UniRef50_A7LAW4 Cluster: ArcC; n=10; Bacteria|Rep: ArcC - Brachy... 34 5.1
UniRef50_A6L044 Cluster: Putative outer membrane protein, probab... 33 6.7
UniRef50_Q9GDV3 Cluster: Acetyl-CoA carboxylase subunit; n=1; Ca... 33 6.7
UniRef50_Q2R904 Cluster: Retrotransposon protein, putative, Ty1-... 33 6.7
UniRef50_Q82EL5 Cluster: Acetyl-coenzyme A synthetase; n=28; cel... 33 6.7
>UniRef50_Q86P20 Cluster: RE18590p; n=8; Endopterygota|Rep: RE18590p
- Drosophila melanogaster (Fruit fly)
Length = 987
Score = 93.1 bits (221), Expect = 8e-18
Identities = 39/67 (58%), Positives = 50/67 (74%)
Frame = +2
Query: 53 RPYRVVSSGESLNLQLIVDNAHAAASYFKNPSPLFEARYEFVHGPLCGPAVLIAASDGEI 232
R RV+SS + +NL++IV HA SYFKNP+PLFEA YEF HGPLCGP L + DGE+
Sbjct: 662 RAVRVISSADQMNLEMIVQGQHAITSYFKNPNPLFEATYEFAHGPLCGPITLGPSPDGEL 721
Query: 233 VYPHLEA 253
V+P+ +A
Sbjct: 722 VFPYKKA 728
Score = 80.6 bits (190), Expect = 4e-14
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 KRIQCIWDLEVEEKRDIWLHFDSIKFSSRHCEDGNIQIYLPGRIEPYLSVCGGNVSETEK 453
+R +CIW+L+V +RD+WL+ + +F+ R C+ I++YL GR+EP VC N+S
Sbjct: 744 RREKCIWELKVAAQRDLWLNLEKARFADRSCDSAKIEVYLAGRLEPRFVVCPENISLARD 803
Query: 454 LPILSAGELGFESLD-DPL 507
LPIL+ ELG D +PL
Sbjct: 804 LPILTTAELGATGADQEPL 822
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/76 (46%), Positives = 45/76 (59%)
Frame = +3
Query: 534 IRIVFIGSASPARASFKIAWTGLYHLPKNSDGSLMTSRLTGEGMKPTDSGQGCDFICPGD 713
+ I + G P R F++ WT L+HLP+N DGSL S L +G GCDF CPGD
Sbjct: 824 VLIQYTGDGQPGRNIFRLVWTELFHLPRNPDGSLAASLLQ-DG--------GCDFRCPGD 874
Query: 714 EALCIPARLICNGVVN 761
+CIP L+CNG+ N
Sbjct: 875 TEVCIPKHLLCNGIAN 890
>UniRef50_A7REV9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 603
Score = 41.9 bits (94), Expect = 0.019
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 271 PKRIQCIWDLEVEEKRDIWLHFDSIKFSSRH--CEDGNIQIY-LPGRIEPYLSVCG 429
P+ +C W++EVE+ I L FD+ FS H C G +Q+Y PG CG
Sbjct: 296 PRNKECSWEIEVEKNMHIHLFFDTFNFSRHHQQCIYGYVQVYDGPGHASVIGQFCG 351
>UniRef50_A6EE97 Cluster: Iron-regulated ABC transporter,
membrane-spanning permease; n=1; Pedobacter sp.
BAL39|Rep: Iron-regulated ABC transporter,
membrane-spanning permease - Pedobacter sp. BAL39
Length = 435
Score = 38.3 bits (85), Expect = 0.24
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +1
Query: 370 DGNIQIYLPGRIEPYLSVCGGNVSETEKLPILSAGELGF-ESLDDPLGWKK--RKRGLSG 540
+ N+ ++ GR EP LS+ + E + +P+L A GF E +D LG K G+
Sbjct: 85 NANVLYFVNGRYEPSLSIIRSTIEELQVMPLLQAASAGFQEIIDQHLGESSVYLKDGIHA 144
Query: 541 L---FLSGVPLQHELRSKLLGRVCIIYLKTQMDH 633
L F++ H K L IY H
Sbjct: 145 LNTSFITDAVFIHVAAGKELSHPVYIYHLADAQH 178
>UniRef50_UPI0000E81E06 Cluster: PREDICTED: similar to
CRP-ductin-alpha, partial; n=1; Gallus gallus|Rep:
PREDICTED: similar to CRP-ductin-alpha, partial - Gallus
gallus
Length = 307
Score = 35.5 bits (78), Expect = 1.7
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 193 WSCGSDCSV*WRNSLSSFRSTGYTEP-PKRIQCIWDLEVEEKRDIWLHFDSIKFSSRHCE 369
+SCG S NS +S + P C+W+++V+ + L F I S C+
Sbjct: 2 YSCGGLIS----NSSGMLQSPNHPGSYPNNADCVWEIQVQNNFRVMLTFRDIAMQSSRCQ 57
Query: 370 DGNIQIY-LPGRIEPYLS-VCGGN 435
I++Y P P L +C G+
Sbjct: 58 YDYIEVYDGPPHSSPLLGRICAGS 81
>UniRef50_A3IWZ3 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 226
Score = 35.5 bits (78), Expect = 1.7
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -1
Query: 605 IQTRPSNFERSSCWRGTPDKNNPDRPRFLFFHPNG--SSKDSNPSSPADRIGNFSVSETL 432
+ T P E SS W P + +PN S+ +NP++PA+ +GN+ + L
Sbjct: 150 LATLPGENEASSTWNDPSLSPIPSQNGLPGGYPNNFPSTMPNNPNNPANGLGNYPTNPAL 209
Query: 431 PPQTDRYGSILP 396
P Q + GS +P
Sbjct: 210 PSQPN--GSPIP 219
>UniRef50_A0WCN8 Cluster: Cation-transporting ATPase; n=1; Geobacter
lovleyi SZ|Rep: Cation-transporting ATPase - Geobacter
lovleyi SZ
Length = 914
Score = 35.5 bits (78), Expect = 1.7
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 295 DLEVEEKRDIWLHFDSIK--FSSRHCEDGNIQIYLPGRIEPYLSVCGGNVSETEKLPI 462
+LE + R + F+S K ++ H EDG Y+ G +E L++C G + ++LPI
Sbjct: 424 ELEETQPRLDEIPFESEKQFMATLHAEDGQRMAYVKGSVEKVLAMCSGVIMAGKELPI 481
>UniRef50_A4M882 Cluster: Peptidase S41; n=1; Petrotoga mobilis
SJ95|Rep: Peptidase S41 - Petrotoga mobilis SJ95
Length = 1065
Score = 34.3 bits (75), Expect = 3.8
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 223 WRNSLSSFRSTGYTEPPKRIQCIWDLEVEEKRDI 324
W N F S+ Y +P KRI +W+++VE+KR +
Sbjct: 96 WHNGKIIF-SSNYVQPFKRITSLWEVDVEDKRKL 128
>UniRef50_A7AW99 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 406
Score = 34.3 bits (75), Expect = 3.8
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 53 RPYRVVSSGESLNLQLIVDNAHAAASYFKNPSPLFEARYEFVHGPLCGPAVLIAASDGEI 232
RP+ + S +L+ + A Y KNP P R + LCG +I +D E+
Sbjct: 157 RPFILPSEAIRRQNRLLTEWDRLEAEYNKNPDPSIAERIRAIKDALCGYNDMIDETDPEL 216
Query: 233 VYPHLEAPVTL 265
P +EA +T+
Sbjct: 217 TTP-VEAALTM 226
>UniRef50_Q2JM42 Cluster: Trypsin domain lipoprotein; n=2;
Synechococcus|Rep: Trypsin domain lipoprotein -
Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 428
Score = 33.9 bits (74), Expect = 5.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 560 GTPDKNNPDRP---RFLFFHPNGSSKDSNPSSPADRIGNFSVSETLPPQTDRYGSILPGR 390
G D P P FL + NG PS+ +D GNF S LPP T R ++LP
Sbjct: 64 GLRDPGEPGLPGIATFLDLNGNGRLDPGEPSTVSDASGNFRFS-NLPPGTYRVTALLPPG 122
Query: 389 YI*MLPSS 366
+ P S
Sbjct: 123 RVFTTPRS 130
>UniRef50_A7LAW4 Cluster: ArcC; n=10; Bacteria|Rep: ArcC -
Brachyspira pilosicoli
Length = 313
Score = 33.9 bits (74), Expect = 5.1
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 313 KRDI-WLHFDSIKFSSRHCEDGNIQIYLPGRIEPYLSVCGGNVSETEKLPILSAGELGFE 489
K D+ WL +I+ + +HC+DG + PG + P + C V T K +++ E +
Sbjct: 245 KPDVKWLDSMTIEEAKKHCDDGQ---FAPGSMLPKVQACMQFVEATGKEAMITLLEKAKD 301
Query: 490 SLDDPLGWKKRK 525
+++ G + RK
Sbjct: 302 AINGKTGTRVRK 313
>UniRef50_A6L044 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Bacteroides vulgatus
ATCC 8482|Rep: Putative outer membrane protein, probably
involved in nutrient binding - Bacteroides vulgatus
(strain ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 1042
Score = 33.5 bits (73), Expect = 6.7
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 590 SNFERSSCWRGTPDKNNPDRPRFLFFHPNGSSKDSN 483
SN +S+ TPD N D PR ++ PNG+ K+S+
Sbjct: 923 SNMLKSTLNAWTPDNRNTDVPRAVYQDPNGNMKESD 958
>UniRef50_Q9GDV3 Cluster: Acetyl-CoA carboxylase subunit; n=1;
Carpobrotus chilensis|Rep: Acetyl-CoA carboxylase
subunit - Carpobrotus chilensis (Sea fig)
Length = 457
Score = 33.5 bits (73), Expect = 6.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 606 HLPKNSDGSLMTSRLTGEGMKPTDSGQGCDFICPGD 713
H KN DG + +S L G G P D + DF PG+
Sbjct: 53 HKSKNGDGPISSSSLDGNGSNPLDRSKDPDFREPGN 88
>UniRef50_Q2R904 Cluster: Retrotransposon protein, putative,
Ty1-copia subclass; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty1-copia subclass - Oryza sativa subsp. japonica (Rice)
Length = 317
Score = 33.5 bits (73), Expect = 6.7
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 170 EFVHGPLCGPAVLIAASDGEIVYPHLEAPVTLNHQNV 280
E VHG LCGP + A S G V HL P T H +
Sbjct: 142 ELVHGDLCGP-ISPATSGGRGVRRHLTMPCTPQHNGI 177
>UniRef50_Q82EL5 Cluster: Acetyl-coenzyme A synthetase; n=28;
cellular organisms|Rep: Acetyl-coenzyme A synthetase -
Streptomyces avermitilis
Length = 652
Score = 33.5 bits (73), Expect = 6.7
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 262 TEP-PKRIQCIWDLEVEEKRDIWLHFDSIKFS---SRHCEDGNIQIYLPGRIEPYLSVCG 429
TEP P ++ IW + W F+ F+ ++ EDG+I +L GR++ + V G
Sbjct: 468 TEPWPSMLRTIWGDDQRFLDTYWSRFEGKYFAGDGAKKDEDGDI--WLLGRVDDVMLVSG 525
Query: 430 GNVSETE 450
N+S TE
Sbjct: 526 HNISTTE 532
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,444,066
Number of Sequences: 1657284
Number of extensions: 18263099
Number of successful extensions: 45243
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 43373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45233
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -