Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1661
         (836 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    27   0.53 
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    26   1.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.9  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    25   3.8  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.0  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   8.7  

>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = -2

Query: 667 FIPSPVNRDVISDPSEFLGK*YRPVQAILNEARAGEA---LPIKTIRI-DLVFSFSI 509
           F+P    + VI  P EFL   YR + A L    + +A   +P++++ + DL F+  I
Sbjct: 19  FLPKDDGKTVIDLPDEFLTDRYRAIGADLQSRFSNDAEQRIPVRSVPMPDLSFANGI 75


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = -2

Query: 667 FIPSPVNRDVISDPSEFLGK*YRPVQAILNEARAGEA---LPIKTI 539
           F P    + V+  P  FL + YRP+ A L      +A   +P++ +
Sbjct: 19  FYPKDNGKTVVDLPENFLTERYRPIGASLQSRFGNDADTRIPVRNV 64


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 215 LQSEPQDHKEVHERIRI*LQREVRDF*SKKQLHGHYR 105
           L+ + Q+H E  E++R+ +    ++F   K+   HY+
Sbjct: 430 LEKKIQEHTESFEQLRVQIDEHNKNFYELKKKKDHYQ 466


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 382 ECYHPRNVSKKI*YCRNVTKYLFFPQPLNPK 290
           EC+ P   S +   CRN T Y F P    P+
Sbjct: 424 ECFDPDRFSAEA--CRNRTPYTFLPFGEGPR 452


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 227  LHQTLQSEPQDHKEVHERIRI*LQREVRDF*SKKQLHGHYRQ 102
            +H     EP+ HK + E  R   Q++ +    ++Q H H +Q
Sbjct: 880  MHTDCDYEPESHKLLAENYRQQHQQQQQQQQQQQQQHEHEQQ 921


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -2

Query: 676 SVGFIPSPVNRDVISDPSEFLGK*YRPVQAILNEARAGEALPIKTI 539
           ++ F   P     ISDP     +  RP     +EAR  + +P+ T+
Sbjct: 287 AISFRTPPYRTIDISDPVRVFVQLERPSDNTYSEARDFQFIPLDTV 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,476
Number of Sequences: 2352
Number of extensions: 19288
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)