Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1661
         (836 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003529-1|AAO39533.1|  987|Drosophila melanogaster RE18590p pro...    93   4e-19
AE013599-3305|AAF46783.2|  674|Drosophila melanogaster CG33227-P...    93   4e-19
AE014296-2034|AAF50006.2| 2523|Drosophila melanogaster CG32092-P...    32   1.1  
AY071730-1|AAL49352.1|  702|Drosophila melanogaster RH44902p pro...    30   3.4  

>BT003529-1|AAO39533.1|  987|Drosophila melanogaster RE18590p
           protein.
          Length = 987

 Score = 93.1 bits (221), Expect = 4e-19
 Identities = 39/67 (58%), Positives = 50/67 (74%)
 Frame = +2

Query: 53  RPYRVVSSGESLNLQLIVDNAHAAASYFKNPSPLFEARYEFVHGPLCGPAVLIAASDGEI 232
           R  RV+SS + +NL++IV   HA  SYFKNP+PLFEA YEF HGPLCGP  L  + DGE+
Sbjct: 662 RAVRVISSADQMNLEMIVQGQHAITSYFKNPNPLFEATYEFAHGPLCGPITLGPSPDGEL 721

Query: 233 VYPHLEA 253
           V+P+ +A
Sbjct: 722 VFPYKKA 728



 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +1

Query: 274 KRIQCIWDLEVEEKRDIWLHFDSIKFSSRHCEDGNIQIYLPGRIEPYLSVCGGNVSETEK 453
           +R +CIW+L+V  +RD+WL+ +  +F+ R C+   I++YL GR+EP   VC  N+S    
Sbjct: 744 RREKCIWELKVAAQRDLWLNLEKARFADRSCDSAKIEVYLAGRLEPRFVVCPENISLARD 803

Query: 454 LPILSAGELGFESLD-DPL 507
           LPIL+  ELG    D +PL
Sbjct: 804 LPILTTAELGATGADQEPL 822



 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 35/76 (46%), Positives = 45/76 (59%)
 Frame = +3

Query: 534  IRIVFIGSASPARASFKIAWTGLYHLPKNSDGSLMTSRLTGEGMKPTDSGQGCDFICPGD 713
            + I + G   P R  F++ WT L+HLP+N DGSL  S L  +G        GCDF CPGD
Sbjct: 824  VLIQYTGDGQPGRNIFRLVWTELFHLPRNPDGSLAASLLQ-DG--------GCDFRCPGD 874

Query: 714  EALCIPARLICNGVVN 761
              +CIP  L+CNG+ N
Sbjct: 875  TEVCIPKHLLCNGIAN 890


>AE013599-3305|AAF46783.2|  674|Drosophila melanogaster CG33227-PB
           protein.
          Length = 674

 Score = 93.1 bits (221), Expect = 4e-19
 Identities = 39/67 (58%), Positives = 50/67 (74%)
 Frame = +2

Query: 53  RPYRVVSSGESLNLQLIVDNAHAAASYFKNPSPLFEARYEFVHGPLCGPAVLIAASDGEI 232
           R  RV+SS + +NL++IV   HA  SYFKNP+PLFEA YEF HGPLCGP  L  + DGE+
Sbjct: 349 RAVRVISSADQMNLEMIVQGQHAITSYFKNPNPLFEATYEFAHGPLCGPITLGPSPDGEL 408

Query: 233 VYPHLEA 253
           V+P+ +A
Sbjct: 409 VFPYKKA 415



 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +1

Query: 274 KRIQCIWDLEVEEKRDIWLHFDSIKFSSRHCEDGNIQIYLPGRIEPYLSVCGGNVSETEK 453
           +R +CIW+L+V  +RD+WL+ +  +F+ R C+   I++YL GR+EP   VC  N+S    
Sbjct: 431 RREKCIWELKVAAQRDLWLNLEKARFADRSCDSAKIEVYLAGRLEPRFVVCPENISLARD 490

Query: 454 LPILSAGELGFESLD-DPL 507
           LPIL+  ELG    D +PL
Sbjct: 491 LPILTTAELGATGADQEPL 509



 Score = 75.8 bits (178), Expect = 7e-14
 Identities = 35/76 (46%), Positives = 45/76 (59%)
 Frame = +3

Query: 534 IRIVFIGSASPARASFKIAWTGLYHLPKNSDGSLMTSRLTGEGMKPTDSGQGCDFICPGD 713
           + I + G   P R  F++ WT L+HLP+N DGSL  S L  +G        GCDF CPGD
Sbjct: 511 VLIQYTGDGQPGRNIFRLVWTELFHLPRNPDGSLAASLLQ-DG--------GCDFRCPGD 561

Query: 714 EALCIPARLICNGVVN 761
             +CIP  L+CNG+ N
Sbjct: 562 TEVCIPKHLLCNGIAN 577


>AE014296-2034|AAF50006.2| 2523|Drosophila melanogaster CG32092-PB
           protein.
          Length = 2523

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
 Frame = +1

Query: 103 CR*CPCSCFXXXXXXXXXXXXIRIRSWTSLW--SCGSDCSV*WRNSLSSFRSTGYTEP-P 273
           CR  P +              IR+++  S +  SCG + +    ++  S  S  Y +  P
Sbjct: 630 CRDHPANLIVPANNVRILTHGIRLQAQFSTFENSCGGNIT----SASGSLSSPNYPDSYP 685

Query: 274 KRIQCIWDLEVEEKRDIWLHFDSIKF-SSRHCEDGNIQIYLPGRIEPYLSV-CGGNVSET 447
             I+C+W +       + + F+++    S HC D  ++I    +  P L++ C  N+ ET
Sbjct: 686 ANIECVWSIRTRPGNALEITFEAMDIVRSEHCNDDFLEIRSSVQ-GPLLALYCDKNLPET 744


>AY071730-1|AAL49352.1|  702|Drosophila melanogaster RH44902p
           protein.
          Length = 702

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
 Frame = -1

Query: 605 IQTRPSNFERSSCWRGT-----PDKNNPD--RPRFLFFHPNGSSKDSNPSSPADR 462
           I  RP +  RS C  G+     P  +NP    P  L F  N    DS  S+PADR
Sbjct: 196 ITIRPDSNNRSDCTNGSGVGDGPATDNPKWTTPELLAFKHNLEFPDSGNSTPADR 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,049,678
Number of Sequences: 53049
Number of extensions: 839236
Number of successful extensions: 2326
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2324
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)