Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1658
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 149 2e-36
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 106 2e-23
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 91 8e-19
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 78 6e-15
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 76 3e-14
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 75 4e-14
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 75 6e-14
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 68 9e-12
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 65 6e-11
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 64 8e-11
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 64 1e-10
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_732| Best HMM Match : AAA (HMM E-Value=0) 60 2e-09
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 47 2e-05
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 39 0.005
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 36 0.033
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 34 0.10
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 34 0.13
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 33 0.18
SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11) 33 0.31
SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08) 32 0.41
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 32 0.41
SB_56686| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.54
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 32 0.54
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_39633| Best HMM Match : CX (HMM E-Value=2.6) 30 2.2
SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3) 30 2.2
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 30 2.2
SB_28024| Best HMM Match : RVT_1 (HMM E-Value=0) 30 2.2
SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_18197| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_22253| Best HMM Match : Pkinase (HMM E-Value=0) 29 2.9
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 29 2.9
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 3.8
SB_50618| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00017) 29 3.8
SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058) 29 5.1
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 29 5.1
SB_34818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_23641| Best HMM Match : DUF837 (HMM E-Value=0.37) 29 5.1
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33) 28 6.7
SB_11883| Best HMM Match : I-set (HMM E-Value=0) 28 6.7
SB_6508| Best HMM Match : AMP-binding (HMM E-Value=2.8026e-45) 28 6.7
SB_4559| Best HMM Match : ICAM_N (HMM E-Value=5.3) 28 6.7
SB_380| Best HMM Match : AAA (HMM E-Value=0.14) 28 6.7
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 8.9
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 28 8.9
SB_913| Best HMM Match : E-MAP-115 (HMM E-Value=1.7) 28 8.9
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 28 8.9
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 28 8.9
SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0) 28 8.9
SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08) 28 8.9
SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 149 bits (362), Expect = 2e-36
Identities = 74/111 (66%), Positives = 83/111 (74%)
Frame = +2
Query: 251 LEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
L+QLTEEKFIVKATNGPRYVVGCRRQ+DK KLK GTRVALDMTTLTIMR+LPREVDPLVY
Sbjct: 63 LKQLTEEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVY 122
Query: 431 NMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHPKDVC 583
NMSHEDPG+++YS +GG P T LF+ V + P C
Sbjct: 123 NMSHEDPGNISYSDVGGLSEQIRELREVIELP-LTNPELFQRVGIAPPKGC 172
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = +3
Query: 84 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 254
REKA +Y+KKL+EH+E+++RLKE R+QLKD TK+YDKSENDLKALQSVGQIVGEVL
Sbjct: 7 REKALLEYKKKLLEHRELDARLKEMREQLKDFTKEYDKSENDLKALQSVGQIVGEVL 63
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPG 600
+VIELPL NPELF RVGI PPKGCLL+GPPG
Sbjct: 149 EVIELPLTNPELFQRVGIAPPKGCLLFGPPG 179
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 106 bits (254), Expect = 2e-23
Identities = 45/73 (61%), Positives = 61/73 (83%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+V+E PL++PE FV +GI PPKG LL+GPPGTGKTL ARAVA++ DA F++V+ S +V K
Sbjct: 98 EVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 157
Query: 688 YIGESARLIREMF 726
Y+GE AR++RE+F
Sbjct: 158 YVGEGARMVRELF 170
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 401 LPREVDPLVYNMSHEDPGDVTYSAIGG 481
LP ++DP V M E+ DVTYS IGG
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGG 88
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 100 bits (239), Expect = 1e-21
Identities = 45/74 (60%), Positives = 58/74 (78%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++VIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA + F++V S +V
Sbjct: 190 KEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQ 249
Query: 685 KYIGESARLIREMF 726
K+IGE AR++RE+F
Sbjct: 250 KFIGEGARMVRELF 263
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 91.1 bits (216), Expect = 8e-19
Identities = 39/73 (53%), Positives = 55/73 (75%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+ +ELPL + EL+ ++GI PP+G LLYGPPG GKT+LA+AVA A F++VV S V K
Sbjct: 178 EAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK 237
Query: 688 YIGESARLIREMF 726
Y+GE R++R++F
Sbjct: 238 YLGEGPRMVRDVF 250
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +2
Query: 251 LEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
LE + + IV +T G Y V +DK LK VAL + ++ LP E D +
Sbjct: 92 LEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIA 151
Query: 431 NMSHEDPGDVTYSAIGG 481
+++E+ +V+Y+ IGG
Sbjct: 152 MLTNEEKPNVSYAEIGG 168
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/71 (22%), Positives = 41/71 (57%)
Frame = +3
Query: 48 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS 227
T+ + S ++P + + Y+K + + +E + + +D+ K+L K+ ++ ++K +QS
Sbjct: 24 TISSLCSPVDPEMDDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQS 83
Query: 228 VGQIVGEVLNS 260
V ++G+ L +
Sbjct: 84 VPLVIGQFLEA 94
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 693
+ELPL +PEL+ +GI PPKG +LYG PGTGKTLLA+AVA+Q A FL+VV S ++ KY+
Sbjct: 396 VELPLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELIQKYL 455
Score = 34.7 bits (76), Expect = 0.077
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 248 SLEQLTEEKFIVKATN-GPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPL 424
+LE++ ++ + +T+ G + V +DK+ L+ G V L+ ++ L + DP+
Sbjct: 306 NLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPM 365
Query: 425 VYNMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHP 571
V M E +Y+ IGG P T L+E + + P
Sbjct: 366 VTVMKLEKAPQESYADIGGLDTQIQEIKESVELP-LTHPELYEEMGIKP 413
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/73 (47%), Positives = 52/73 (71%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
++IE+PL NPELF G+ PP+G LLYGP GTGKT++ARAVA++ +F + ++ +
Sbjct: 270 EMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARAVANETGVHFFCINGPEVLSR 329
Query: 688 YIGESARLIREMF 726
Y GE+ +RE+F
Sbjct: 330 YYGETEARLREIF 342
Score = 84.2 bits (199), Expect = 1e-16
Identities = 34/74 (45%), Positives = 53/74 (71%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ +E PL +PE F R+GI PP+G L+YGPPG KTL+ARA+A++ NF+ + +
Sbjct: 550 KEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARALATESGLNFIAIKGPELFS 609
Query: 685 KYIGESARLIREMF 726
K++GES + +RE+F
Sbjct: 610 KWVGESEKAVREVF 623
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 78.2 bits (184), Expect = 6e-15
Identities = 30/74 (40%), Positives = 53/74 (71%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+++++ P+ +P+ F++ G+TP KG L YGPPG GKTLLA+A+A++ ANF+ + ++
Sbjct: 323 QELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 382
Query: 685 KYIGESARLIREMF 726
+ GES +R++F
Sbjct: 383 MWFGESEANVRDVF 396
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 693
I+LPL++PELF G+ G LLYGPPGTGKTL+A+AVA++ NFL V +++ Y+
Sbjct: 828 IQLPLLHPELFA-AGLRR-SGVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPELINMYV 885
Query: 694 GESARLIREMF 726
G+S + +RE+F
Sbjct: 886 GQSEQNVREVF 896
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 499 TAEKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 678
T+++ +E ++ P L RV P LL G PGTGK + AV+SQL+ ++ +
Sbjct: 521 TSQEKLE-KIIRPYLSKRVNGPPFVQVLLTGLPGTGKRAICMAVSSQLNLAVQEISCFDL 579
Query: 679 VDKYIGESARLIREMF 726
+ + + I+ +F
Sbjct: 580 IGDSVAATETRIKNLF 595
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+ IE PL++PE F R+G+ P+G LLYGPPG KT L RA AS F+ + + +
Sbjct: 27 QAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSS 86
Query: 688 YIGESARLIREMF 726
Y+G++ R +RE+F
Sbjct: 87 YVGDAERTLRELF 99
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +1
Query: 523 PLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 702
P+ +PE F +G+T P G LL GPPG GKTLLA+A+A++ NF+ V +++ Y+GES
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGES 61
Query: 703 ARLIREMF 726
R +R++F
Sbjct: 62 ERAVRQVF 69
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 74.9 bits (176), Expect = 6e-14
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 705
+ +PE+F +G+TP G LL+GPPG GKTLLA A+A +L+ FLK+ ++ IV GES
Sbjct: 696 MCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESE 755
Query: 706 RLIREMF 726
+RE+F
Sbjct: 756 EKVRELF 762
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/72 (43%), Positives = 46/72 (63%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+ IE PL++PE F R+G+ P+G LLYGPPG KT L RA AS F+ + + +
Sbjct: 498 QAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSS 557
Query: 688 YIGESARLIREM 723
Y+G++ R +RE+
Sbjct: 558 YVGDAERTLREL 569
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+++++ PL PE F +GI PKG LL G PG GKTLL + + +
Sbjct: 224 KELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFG 283
Query: 685 KYIGESARLIREMF 726
+ GES +R +F
Sbjct: 284 PHAGESEENLRRVF 297
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
E+ + LPL+ P+ F + P +G L+ GPPGTGKT+LA+AVA++ F V SS +
Sbjct: 263 EEAVVLPLLMPDYFQGIR-RPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTS 321
Query: 685 KYIGESARLIREMF 726
KY GES +L+R +F
Sbjct: 322 KYRGESEKLVRILF 335
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLD-----ANFLKVVS 669
+++I PL+ PE+F + ITPP+G L +GPPGTGKTL+ARA+A++ +F
Sbjct: 897 KEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKG 956
Query: 670 SAIVDKYIGESARLIREMF 726
+ + K++GES R +R +F
Sbjct: 957 ADCLSKWVGESERQLRLLF 975
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 705
L NP+ + +G PKG +L GPPGTGKTLLA+AVA + FL + S ++ ++G
Sbjct: 67 LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVAGEAGVPFLSISGSEFLEMFVGVGP 126
Query: 706 RLIREMF 726
+R++F
Sbjct: 127 ARVRDLF 133
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +1
Query: 544 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 723
+ ++G PKG LL GPPGTGKTLLA+AVA++ D FL + S V+ + G + +R++
Sbjct: 150 YTQLGAKIPKGALLVGPPGTGKTLLAKAVATEADVPFLSMAGSDFVEMFAGVGSARVRDL 209
Query: 724 F 726
F
Sbjct: 210 F 210
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = +1
Query: 541 LFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIRE 720
LF + + G LLYGPPGTGKTLLA VA + NF+ + ++ KYIG S + +R+
Sbjct: 692 LFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRD 751
Query: 721 MF 726
MF
Sbjct: 752 MF 753
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++V+E L NPE F R+G P G LL G PGTGKTLLA+AVA + F S +
Sbjct: 144 QEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFFFCSGSEFDE 202
Query: 685 KYIGESARLIREMF 726
++G A +R +F
Sbjct: 203 MFVGVGAARVRNLF 216
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/60 (43%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +1
Query: 550 RVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS-AIVDKYIGESARLIREMF 726
++G+ KG LL+GPPGTGKTL+AR + + L+ K++S +++K++GES IR++F
Sbjct: 176 KMGLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGESEANIRKLF 235
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 57.6 bits (133), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 523 PLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 663
P+ +PE F +G+T P G LL GPPG GKTLLA+A+A++ NF+ V
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISV 48
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+++++ PL PE F +GI PKG LL G PG GKTLL + + +
Sbjct: 54 KELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFG 113
Query: 685 KYIGESARLIREMF 726
+ GES +R +F
Sbjct: 114 PHAGESEENLRRVF 127
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/44 (47%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +1
Query: 598 GTGKTLLARAVASQLD-ANFLKVVSSAIVDKYIGESARLIREMF 726
GTGK+ LA+AVA++ + + F+ V SS +V K++GES RL++++F
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLF 218
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 532 NPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 645
+P ++ GI +G LLYGPPG GK+ +A+A +LD
Sbjct: 210 SPRWYMDRGIPYRRGYLLYGPPGCGKSSFIQALAGELD 247
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +3
Query: 57 ASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
+S D + L + A +D K +E +E E RL+ D+L + KQ +K+E++LKAL+
Sbjct: 1590 SSPFDFDEL-DGAKRDRDKYQLEKEEAEKRLQSYEDELNEKQKQKEKAEDNLKALK 1644
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK-YIGE 699
LL GP G+GKTLLA+ +A LD F +A+ Y+GE
Sbjct: 274 LLLGPTGSGKTLLAQTIARCLDVPFAICDCTALTQAGYVGE 314
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 571 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 681
+ L YGPPGTGKT+ A+++A ++ + +V
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVV 366
>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
Length = 628
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 556 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFL 657
G + P LL+GPPGTGKT+ Q+ NFL
Sbjct: 587 GQSRPTPYLLFGPPGTGKTVTLVEAMLQVHRNFL 620
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQL 642
L YGPPGTGKT AVA QL
Sbjct: 14 LFYGPPGTGKTSTILAVAKQL 34
>SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11)
Length = 806
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 556 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 693
G+ P + C+L GPP +GKTL+ + + + + +++ S ++D+ I
Sbjct: 355 GLLPVRACIL-GPPASGKTLVVKQLCTHYKLHHIRIQS--VIDEAI 397
>SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08)
Length = 251
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQL-DANFLK------VVSSAIVDKYIGES 702
+ G PGTGKT +AR +A L +A +K V +A+V +YIGE+
Sbjct: 17 MFVGNPGTGKTTMARMMAGILHEAGVIKRNKVIEVQRTALVGRYIGET 64
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 565 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 663
P K C+L GPP +GKTL+A+ +A + +A L V
Sbjct: 319 PCKVCVL-GPPHSGKTLVAKQLAERYNAKVLDV 350
>SB_56686| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1888
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 75 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEND 209
EP+ E+ Q Y + H+E+ ++LKE R + L YD + D
Sbjct: 1022 EPINERDTQIYFELASTHEELSNQLKESRPDVGGLVIVYDGDKTD 1066
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 571 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 672
K LL GPPG GKT A V +L +++++ +S
Sbjct: 272 KAALLSGPPGVGKTTTATLVCQELGYSYVEMNAS 305
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 571 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 672
K LL GPPG GKT LA +A N +++ +S
Sbjct: 381 KVALLCGPPGLGKTTLAHVIAQHAGYNVVEMNAS 414
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKTLLARAVASQL--DANFLKVVSSAI 678
++ G + L+ G PGTGKT +A +A L D F + S I
Sbjct: 162 IKEGKIAGRAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEI 207
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 69 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 236
++E L+EK+ R+ ++KE+E L E + L DL+K + K L+ + Q
Sbjct: 145 NVEELKEKSTLLEREVNQQNKEIERILSENKVTLADLSKTQENLMKKAKELEDLQQ 200
>SB_39633| Best HMM Match : CX (HMM E-Value=2.6)
Length = 306
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 212 ESLTKCWTNSWRSLEQLTEEK 274
E LTK WT+ WR +++ EE+
Sbjct: 90 EELTKNWTSKWRETQKIIEER 110
>SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3)
Length = 1102
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 87 EKAFQDYRKKLM-EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
E A QD + +L + ++E R+ G ++K+LTK+ +S +D+K ++
Sbjct: 559 EGAQQDKKAELSTDISKLEYRVNIGNSRIKELTKRNKESSSDIKGIK 605
>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 618 EQSLSCTRRSVQQTSFGWSDTDSNKQLWVH*GKFNHLL 505
E + SC R+ V +SF W D DS+ +W+ KFN+ L
Sbjct: 1066 ELTTSCNRK-VLFSSFYWPDPDSDPYVWLE--KFNNYL 1100
>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
Length = 1064
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 556 GITPPKGCLLYGPPGTGKTL 615
G + P L++GPPGTGKT+
Sbjct: 547 GTSRPHPYLIFGPPGTGKTI 566
>SB_28024| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 968
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 618 EQSLSCTRRSVQQTSFGWSDTDSNKQLWVH*GKFNHLL 505
E + SC R+ V +SF W D DS+ +W+ KFN+ L
Sbjct: 202 ELTTSCNRK-VLFSSFYWPDPDSDPYVWLE--KFNNYL 236
>SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1821
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 618 EQSLSCTRRSVQQTSFGWSDTDSNKQLWVH*GKFNHLL 505
E + SC R+ V +SF W D DS+ +W+ KFN+ L
Sbjct: 13 ELTTSCNRK-VLFSSFYWPDPDSDPYVWLE--KFNNYL 47
>SB_18197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 618 EQSLSCTRRSVQQTSFGWSDTDSNKQLWVH*GKFNHLL 505
E + SC R+ V +SF W D DS+ +W+ KFN+ L
Sbjct: 847 ELTTSCNRK-VLFSSFYWPDPDSDPYVWLE--KFNNYL 881
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV--DKYI-GESARLIRE 720
++ GPPGTGKT + VA L N K S DK + GE ++IRE
Sbjct: 875 VIQGPPGTGKTYIGLKVAKVLLHNKKKWDSGTEQHDDKGVEGEQLQMIRE 924
>SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 870
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 60 STSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 221
S S + EKA + +K + +ES ++ RD+ KD ++ +SEN+L L
Sbjct: 263 SGSKHDDAEEKARRKEKKMKKDRPSLESSSRKKRDKDKDAMRERLRSENELPHL 316
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 84 REKAFQDYRKKLMEHKEVESRLKEGR-DQLKDLTKQYDKSENDLKALQSVGQIVG 245
RE+AFQD KLM H ++ S+L + + + + D QY S D +++GQ+ G
Sbjct: 653 REQAFQDLATKLMSH-QINSKLAQLKPNDIPDPKWQYWPSLFD----KNIGQVAG 702
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 87 EKAFQDYRK-KLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
EK +Q YR+ K E K + ++K ++LKD K +DLK LQ
Sbjct: 579 EKKYQQYREEKEPELKSLRDQVKNLGERLKDAEFVKKKQLDDLKKLQ 625
>SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +3
Query: 48 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
T+ + +D+E R+ + +RK++ E + +S L+ Q K+ K+ E+D+K L+
Sbjct: 367 TLQQTANDLEAQRKASEYSFRKRIHETDQAKSELEW---QQKNTMKEIATLEDDIKGLK 422
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3
Query: 87 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
EK DYRK E+ ++ +++ +++DL D++E + +A++
Sbjct: 1229 EKLESDYRKLQQENVDLRAKVNALNKRIRDLEAAKDRAEKEKQAIK 1274
>SB_50618| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00017)
Length = 748
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 618 EQSLSCTRRSVQQTSFGWSDTDSNKQLWVH*GKFNHLL 505
E + SC R+ V +SF W D DS+ +W+ KFN L
Sbjct: 266 ELTTSCNRK-VLFSSFYWPDPDSDPYVWLE--KFNSYL 300
>SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 99 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 215
+DY+ KL EHK L+ QL+ KQY + +D K
Sbjct: 581 KDYKDKLEEHKFQVVALQTENAQLRSNVKQYKRLIDDYK 619
>SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058)
Length = 333
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 48 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLK 173
T+ + + + L+ K +++LME K + S+ K+ RD+LK
Sbjct: 73 TLSMTEKERDELKSKMNTGLKEELMEVKNLLSKTKQERDELK 114
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKTLLARAVA 633
VR +T P ++YG PGTGK+ A A+A
Sbjct: 2159 VRTALTHPL-TMVYGQPGTGKSWTAVAIA 2186
>SB_34818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 66 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 221
SD+E K +KK E +E RL+ D L D+ +K +++ +
Sbjct: 51 SDVEEYEGKKKAARKKKAAEKRETSKRLRPVEDDLDDIFTNVEKRRKEMEEI 102
>SB_23641| Best HMM Match : DUF837 (HMM E-Value=0.37)
Length = 201
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 72 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 215
+E LRE R++ +H+ S LK+G +++ T Q ++ N+L+
Sbjct: 17 LEDLREVVAATEREEHAKHERRVSALKDGEKIIEERTTQLARTHNELQ 64
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 84 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
REK Q+ + ME++++ L E R QL+D+ + +EN+ + L+
Sbjct: 299 REKGLQN---QSMENRKLAQSLDELRQQLRDMKNKLSYAENEAQRLR 342
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = +3
Query: 132 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 242
E +++LKE D++++L +QYD+ + L++ +++
Sbjct: 2576 EAKAKLKEVTDRMEELKRQYDEKSAQKEELRAKAELL 2612
>SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33)
Length = 680
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 400 MSHYCKSSHVEGNSCSSFKLVLVKLPTTANNVARAISSFYNKFFFCELFKTSP 242
++ YCK + FK + ++ AN +AR + Y +F++ +LF P
Sbjct: 236 LAKYCKGGFLR----QGFKTLPLQDIVKANQIAREVIESYPEFYYLDLFYNLP 284
>SB_11883| Best HMM Match : I-set (HMM E-Value=0)
Length = 616
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -1
Query: 391 YCKSSHVEGNSCSSFKLVLVKLPTTANNVARAISSFYNKFFF-CELFKTSPTICPTLCKA 215
+C++S + L LP NV +F + FF L P ICPT C+
Sbjct: 107 FCRTSFASARHSAERPL---HLPDILPNVLCICPTFCHTFFASARLSAERPFICPTFCRT 163
Query: 214 F 212
F
Sbjct: 164 F 164
>SB_6508| Best HMM Match : AMP-binding (HMM E-Value=2.8026e-45)
Length = 1038
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3
Query: 704 ADSPMYLSTIADDTTFKKLASSCEATALA 618
ADSP Y + +AD++T++ LA SC LA
Sbjct: 935 ADSPTY-AHLADNSTYEHLADSCTYEHLA 962
>SB_4559| Best HMM Match : ICAM_N (HMM E-Value=5.3)
Length = 244
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +3
Query: 84 REKAFQDYRKKLMEHKEVESRLKEGR----DQLKDLTKQYDKSENDLKAL 221
REK + +KKL E +++E++ G DQLK L+++ D E +L AL
Sbjct: 193 REKLGRKLKKKLCEIQQLEAKKNSGGKLDCDQLKKLSRKRD-LEEELAAL 241
>SB_380| Best HMM Match : AAA (HMM E-Value=0.14)
Length = 508
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 526 LMNPELFV---RVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
L NPE ++ + PP ++ GP G GKTL R +A +L
Sbjct: 102 LENPEAYLPDNQALKPPPIRLMIVGPKGAGKTLHGRELARKL 143
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +3
Query: 66 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYD 194
SD+E L+E+ +D +HK++++R + +D+L +T++ D
Sbjct: 179 SDVEELQEQV-EDMAALAKKHKQLKTRNDDLQDELDQVTRKRD 220
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 111 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLNS 260
K+ ++ +E+++R R+ KQ+D+SEN + L+ E ++S
Sbjct: 447 KRNLQLQELKARADAAREAATSCKKQFDESENQRRQLEKALAAAREEVHS 496
>SB_913| Best HMM Match : E-MAP-115 (HMM E-Value=1.7)
Length = 856
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 203 K*PESLTKCWTNSWRSLEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTT 382
K P+SL K + RSL Q ++ +V + R+ + ++++ + L GG D
Sbjct: 107 KRPQSLGKAINRTIRSLPQSPRKRQVVVSGLAKRFAINVEKEMEAS-LSGGGNALSDEVR 165
Query: 383 LTIM 394
T++
Sbjct: 166 STVL 169
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 99 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 215
Q+ KKL E RL E + ++L K+ +K N+LK
Sbjct: 331 QNVTKKLKETSSEYERLSEELGERENLLKESEKKRNELK 369
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 553 VGITPPKGCLLYGPPGTGKTLLARAVAS 636
+ + G LL GP G+GKT L VAS
Sbjct: 113 LAVAAGSGVLLEGPVGSGKTCLVEHVAS 140
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 568 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
P+ LL G PG GKT L A+A +++ S D
Sbjct: 1617 PRPILLEGSPGVGKTSLVSAIAKASGHELVRINLSEQTD 1655
>SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 108 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
R + EH+E E+ L+ +D+L + K Y++ + DL+ ++
Sbjct: 275 RDRRREHREEETVLR--KDELDKVAKLYEEEKQDLREME 311
>SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)
Length = 758
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 75 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 206
+P R++ F++ K+ E + + K+G +LKD KQ EN
Sbjct: 238 KPDRDEMFRENMKEYEEQAKKYVKPKKGPPKLKDRLKQQQSHEN 281
>SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 363 TRVPPLSLFLSSCRRQPTT*RGPLVAFTINFSSVSCSRLL 244
T + + +F+++C R+ GP+ + T N+ SV S LL
Sbjct: 936 TTMKKIQVFINTCLRKILRSAGPIRSATRNYGSVQSSSLL 975
>SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08)
Length = 421
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 363 TRVPPLSLFLSSCRRQPTT*RGPLVAFTINFSSVSCSRLL 244
T + + +F+++C R+ GP+ + T N+ SV S LL
Sbjct: 292 TTMKKIQVFINTCLRKILRSAGPIRSTTRNYGSVQSSSLL 331
>SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 589 GPPGTGKTLLARAVASQLDANF 654
GPPGTGKT +A + S + NF
Sbjct: 592 GPPGTGKTDVAVQIISNIYHNF 613
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,737,468
Number of Sequences: 59808
Number of extensions: 475303
Number of successful extensions: 1680
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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