Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1658
(727 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 136 1e-32
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 136 1e-32
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 109 1e-24
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 106 2e-23
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 103 2e-22
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 103 2e-22
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 98 5e-21
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 98 5e-21
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 95 4e-20
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 89 3e-18
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 89 4e-18
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 83 2e-16
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 83 2e-16
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 83 2e-16
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 82 3e-16
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 81 1e-15
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 81 1e-15
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 79 4e-15
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 77 1e-14
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 77 2e-14
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 77 2e-14
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 77 2e-14
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 76 3e-14
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 75 6e-14
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 75 6e-14
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 73 1e-13
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 73 2e-13
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 73 2e-13
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 72 3e-13
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 72 4e-13
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 72 4e-13
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 71 6e-13
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 71 8e-13
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 70 2e-12
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 70 2e-12
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 70 2e-12
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 69 2e-12
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 68 6e-12
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 68 6e-12
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 67 1e-11
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 67 1e-11
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 66 2e-11
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 66 2e-11
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 65 5e-11
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 65 5e-11
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 64 7e-11
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 64 1e-10
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 63 2e-10
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 62 3e-10
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 62 4e-10
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 62 4e-10
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 62 5e-10
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 60 2e-09
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 57 1e-08
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 53 2e-07
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 50 1e-06
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 46 3e-05
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 43 2e-04
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 42 4e-04
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 42 6e-04
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 41 0.001
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 41 0.001
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 41 0.001
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 41 0.001
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 40 0.002
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 40 0.002
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 40 0.002
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 39 0.003
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 39 0.004
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 38 0.007
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 38 0.007
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 38 0.007
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 38 0.007
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 37 0.012
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 36 0.021
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 36 0.027
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 36 0.027
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 36 0.036
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 36 0.036
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 36 0.036
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 36 0.036
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 35 0.048
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 35 0.048
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 35 0.048
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 35 0.048
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 35 0.063
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 35 0.063
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 34 0.083
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 34 0.083
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 34 0.083
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 34 0.083
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 34 0.083
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 34 0.11
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 34 0.11
At2g36380.1 68415.m04464 ABC transporter family protein related ... 34 0.11
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 33 0.15
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 33 0.15
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 33 0.15
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 33 0.19
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 33 0.19
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 33 0.19
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 33 0.19
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 33 0.19
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 33 0.19
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 33 0.19
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 33 0.25
At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR... 33 0.25
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 33 0.25
At4g28070.1 68417.m04026 AFG1-like ATPase family protein contain... 32 0.34
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 32 0.34
At1g73170.1 68414.m08466 expressed protein 32 0.34
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 32 0.34
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 32 0.34
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 32 0.34
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 32 0.45
At4g30490.1 68417.m04329 AFG1-like ATPase family protein contain... 31 0.59
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 31 0.59
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 31 0.59
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 31 0.59
At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR... 31 0.78
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 31 0.78
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 31 0.78
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 31 0.78
At3g05790.1 68416.m00650 Lon protease, putative similar to Lon p... 31 0.78
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 31 1.0
At5g38850.1 68418.m04699 disease resistance protein (TIR-NBS-LRR... 31 1.0
At5g38350.1 68418.m04628 disease resistance protein (NBS-LRR cla... 31 1.0
At4g15233.1 68417.m02334 ABC transporter family protein similar ... 31 1.0
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 31 1.0
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 31 1.0
At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR... 30 1.4
At5g45050.2 68418.m05524 disease resistance protein-related simi... 30 1.8
At5g45050.1 68418.m05523 disease resistance protein-related simi... 30 1.8
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 30 1.8
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 30 1.8
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 30 1.8
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 30 1.8
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 30 1.8
At3g30420.1 68416.m03847 hypothetical protein low similarity to ... 30 1.8
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 30 1.8
At1g54430.1 68414.m06209 hypothetical protein 30 1.8
At1g51940.1 68414.m05855 protein kinase family protein / peptido... 30 1.8
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 29 2.4
At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR... 29 2.4
At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR... 29 2.4
At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR... 29 2.4
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 29 2.4
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 29 2.4
At3g19670.1 68416.m02492 FF domain-containing protein / WW domai... 29 2.4
At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR... 29 2.4
At5g40060.1 68418.m04860 disease resistance protein (TIR-NBS-LRR... 29 3.1
At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyri... 29 3.1
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 29 3.1
At5g49140.1 68418.m06082 disease resistance protein (TIR-NBS-LRR... 29 4.1
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 29 4.1
At1g72850.1 68414.m08426 disease resistance protein (TIR-NBS cla... 29 4.1
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 28 5.5
At3g51560.1 68416.m05646 disease resistance protein (TIR-NBS-LRR... 28 5.5
At3g25620.1 68416.m03189 ABC transporter family protein similar ... 28 5.5
At1g65810.1 68414.m07468 tRNA-splicing endonuclease positive eff... 28 5.5
At1g63870.1 68414.m07233 disease resistance protein (TIR-NBS-LRR... 28 5.5
At5g48660.1 68418.m06022 expressed protein ; expression supporte... 28 7.2
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 28 7.2
At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR... 28 7.2
At5g46270.1 68418.m05696 disease resistance protein (TIR-NBS-LRR... 28 7.2
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 28 7.2
At2g34450.1 68415.m04227 high mobility group (HMG1/2) family pro... 28 7.2
At2g33793.1 68415.m04145 expressed protein 28 7.2
At2g03270.1 68415.m00280 DNA-binding protein, putative similar t... 28 7.2
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 28 7.2
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 28 7.2
At1g59680.1 68414.m06713 F-box family protein similar to mDj6 GB... 28 7.2
At1g33290.2 68414.m04118 sporulation protein-related isoform con... 28 7.2
At1g33290.1 68414.m04117 sporulation protein-related isoform con... 28 7.2
At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR... 27 9.6
At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR... 27 9.6
At5g45210.1 68418.m05549 disease resistance protein (TIR-NBS-LRR... 27 9.6
At5g37160.1 68418.m04461 tRNA-splicing endonuclease positive eff... 27 9.6
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 27 9.6
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 27 9.6
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 27 9.6
At3g49830.1 68416.m05448 DNA helicase-related similar to DNA hel... 27 9.6
At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR... 27 9.6
At1g17840.1 68414.m02208 ABC transporter family protein similar ... 27 9.6
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 27 9.6
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 136 bits (329), Expect = 1e-32
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 693
IELPLMNPELF+RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVVSSAI+DKYI
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYI 214
Query: 694 GESARLIREMF 726
GESARLIREMF
Sbjct: 215 GESARLIREMF 225
Score = 123 bits (297), Expect = 1e-28
Identities = 55/77 (71%), Positives = 65/77 (84%)
Frame = +2
Query: 251 LEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
L L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VY
Sbjct: 67 LRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVY 126
Query: 431 NMSHEDPGDVTYSAIGG 481
NM HEDPG+++YSA+GG
Sbjct: 127 NMLHEDPGNISYSAVGG 143
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/57 (56%), Positives = 47/57 (82%)
Frame = +3
Query: 84 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 254
R A +YRKKL++HKE+ESR++ R+ L+ K+++K+E+DLK+LQSVGQI+GEVL
Sbjct: 11 RTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVL 67
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 136 bits (329), Expect = 1e-32
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 693
IELPLMNPELF+RVGI PPKG LLYGPPGTGKTLLARA+AS +DANFLKVVSSAI+DKYI
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYI 214
Query: 694 GESARLIREMF 726
GESARLIREMF
Sbjct: 215 GESARLIREMF 225
Score = 123 bits (297), Expect = 1e-28
Identities = 55/77 (71%), Positives = 65/77 (84%)
Frame = +2
Query: 251 LEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
L L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VY
Sbjct: 67 LRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVY 126
Query: 431 NMSHEDPGDVTYSAIGG 481
NM HEDPG+++YSA+GG
Sbjct: 127 NMLHEDPGNISYSAVGG 143
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/57 (57%), Positives = 46/57 (80%)
Frame = +3
Query: 84 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 254
R A DYRKKL+ HKE+ESR++ R+ L+ K+++K+E+DLK+LQSVGQI+GEVL
Sbjct: 11 RTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVL 67
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 109 bits (263), Expect = 1e-24
Identities = 46/73 (63%), Positives = 63/73 (86%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+V+ELP+++PE FV++GI PPKG L YGPPGTGKTLLARAVA++ DA F++V+ S +V K
Sbjct: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241
Query: 688 YIGESARLIREMF 726
Y+GE AR++RE+F
Sbjct: 242 YVGEGARMVRELF 254
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +2
Query: 266 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 445
+ K+++ ++VVG ++ ++ G RV +D I LP ++DP V M+ E
Sbjct: 101 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
Query: 446 DPGDVTYSAIGG 481
+ DVTY+ +GG
Sbjct: 161 EKPDVTYNDVGG 172
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 106 bits (254), Expect = 2e-23
Identities = 46/73 (63%), Positives = 62/73 (84%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+V+ELP+++PE FVR+GI PPKG L YGPPG+GKTL+ARAVA++ A F++VV S +V K
Sbjct: 219 EVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQK 278
Query: 688 YIGESARLIREMF 726
YIGE AR++RE+F
Sbjct: 279 YIGEGARMVRELF 291
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +2
Query: 266 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 445
+ K++V +YVVG + ++ G RV +D I LP ++DP V M+ E
Sbjct: 138 DAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVE 197
Query: 446 DPGDVTYSAIGG 481
+ D TYS IGG
Sbjct: 198 EKPDATYSDIGG 209
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 103 bits (246), Expect = 2e-22
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++VIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA D F++V S +V
Sbjct: 174 KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233
Query: 685 KYIGESARLIREMF 726
KYIGE +R++RE+F
Sbjct: 234 KYIGEGSRMVRELF 247
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = +2
Query: 266 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 445
+ K +VK +YVV + +D KL TRVAL + + LP +VDPLV M E
Sbjct: 94 KNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVE 153
Query: 446 DPGDVTYSAIGG 481
D TY IGG
Sbjct: 154 KVPDSTYDMIGG 165
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 103 bits (246), Expect = 2e-22
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++VIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA D F++V S +V
Sbjct: 174 KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233
Query: 685 KYIGESARLIREMF 726
KYIGE +R++RE+F
Sbjct: 234 KYIGEGSRMVRELF 247
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +2
Query: 266 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 445
+ K +VK +YVV + +D K+ TRVAL + + LP +VDPLV M E
Sbjct: 94 KNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVE 153
Query: 446 DPGDVTYSAIGG 481
D TY IGG
Sbjct: 154 KVPDSTYDMIGG 165
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 98.3 bits (234), Expect = 5e-21
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ +ELPL +PEL+ +GI PPKG +LYG PGTGKTLLA+AVA+ A FL+VV S ++
Sbjct: 201 KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQ 260
Query: 685 KYIGESARLIREMF 726
KY+G+ +L+RE+F
Sbjct: 261 KYLGDGPKLVRELF 274
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 248 SLEQLTEEKF-IVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPL 424
+LE+L +E IV ++ GP Y VG +DK++L+ G + + L+++ L EVDP+
Sbjct: 114 NLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPM 173
Query: 425 VYNMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHP 571
V M E +Y+ IGG P T L+E + + P
Sbjct: 174 VSVMKVEKAPLESYADIGGLEAQIQEIKEAVELP-LTHPELYEDIGIKP 221
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 98.3 bits (234), Expect = 5e-21
Identities = 41/74 (55%), Positives = 58/74 (78%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ +ELPL +PEL+ +GI PPKG +LYG PGTGKTLLA+AVA+ A FL+VV S ++
Sbjct: 201 KEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQ 260
Query: 685 KYIGESARLIREMF 726
KY+G+ +L+RE+F
Sbjct: 261 KYLGDGPKLVRELF 274
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 248 SLEQLTEEKF-IVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPL 424
+LE+L +E IV ++ GP Y VG +DK++L+ G + + L+++ L EVDP+
Sbjct: 114 NLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPM 173
Query: 425 VYNMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHP 571
V M E +Y+ IGG P T L+E + + P
Sbjct: 174 VSVMKVEKAPLESYADIGGLEAQIQEIKEAVELP-LTHPELYEDIGIKP 221
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/73 (54%), Positives = 57/73 (78%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+ +ELPL + EL+ ++GI PP+G LLYGPPGTGKT+LA+AVA+ A F++VV S V K
Sbjct: 169 EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQK 228
Query: 688 YIGESARLIREMF 726
Y+GE R++R++F
Sbjct: 229 YLGEGPRMVRDVF 241
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +2
Query: 251 LEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
+E + + IV +T G Y V +++ LK VAL + ++ LP E D +
Sbjct: 83 MEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSIS 142
Query: 431 NMSHEDPGDVTYSAIGG 481
+S + DV+Y+ IGG
Sbjct: 143 LLSQSEKPDVSYNDIGG 159
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/73 (53%), Positives = 54/73 (73%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+ I LP+ + E F ++GI PPKG LLYGPPGTGKTL+ARA A+Q +A FLK+ +V
Sbjct: 184 EAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
Query: 688 YIGESARLIREMF 726
+IG+ A+L+R+ F
Sbjct: 244 FIGDGAKLVRDAF 256
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 88.6 bits (210), Expect = 4e-18
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+ I LP+ + E F ++G+ PPKG LLYGPPGTGKTL+ARA A+Q +A FLK+ +V
Sbjct: 185 EAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 244
Query: 688 YIGESARLIREMF 726
+IG+ A+L+R+ F
Sbjct: 245 FIGDGAKLVRDAF 257
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+++ELPL +P+LF +G+ PPKG LLYGPPG+GKTL+ARAVA++ A F + I+ K
Sbjct: 221 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 280
Query: 688 YIGESARLIREMF 726
GES +R+ F
Sbjct: 281 LAGESESNLRKAF 293
Score = 77.8 bits (183), Expect = 7e-15
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ ++ P+ +PE F + G++P KG L YGPPG GKTLLA+A+A++ ANF+ V ++
Sbjct: 493 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 552
Query: 685 KYIGESARLIREMF 726
+ GES +RE+F
Sbjct: 553 MWFGESEANVREIF 566
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+++ELPL +P+LF +G+ PPKG LLYGPPG+GKTL+ARAVA++ A F + I+ K
Sbjct: 222 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 281
Query: 688 YIGESARLIREMF 726
GES +R+ F
Sbjct: 282 LAGESESNLRKAF 294
Score = 77.4 bits (182), Expect = 9e-15
Identities = 31/74 (41%), Positives = 51/74 (68%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ ++ P+ +PE F + G++P KG L YGPPG GKTLLA+A+A++ ANF+ + ++
Sbjct: 494 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 553
Query: 685 KYIGESARLIREMF 726
+ GES +RE+F
Sbjct: 554 MWFGESEANVREIF 567
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+++ELPL +P+LF +G+ PPKG LLYGPPG+GKTL+ARAVA++ A F + I+ K
Sbjct: 221 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 280
Query: 688 YIGESARLIREMF 726
GES +R+ F
Sbjct: 281 LAGESESNLRKAF 293
Score = 77.8 bits (183), Expect = 7e-15
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ ++ P+ +PE F + G++P KG L YGPPG GKTLLA+A+A++ ANF+ V ++
Sbjct: 493 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 552
Query: 685 KYIGESARLIREMF 726
+ GES +RE+F
Sbjct: 553 MWFGESEANVREIF 566
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/75 (48%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPP-KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 681
++++ LPL PELF + +T P KG LL+GPPGTGKT+LA+AVA + DANF+ + S+I
Sbjct: 833 KELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKEADANFINISMSSIT 892
Query: 682 DKYIGESARLIREMF 726
K+ GE + ++ +F
Sbjct: 893 SKWFGEGEKYVKAVF 907
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +1
Query: 499 TAEKVIELPLMNPELFVRVGITPP-KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSA 675
T ++++ LPL PELF + +T P KG LL+GPPGTGKT+LA+AVA++ ANF+ + S+
Sbjct: 974 TLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1033
Query: 676 IVDKYIGESARLIREMF 726
I K+ GE + ++ +F
Sbjct: 1034 ITSKWFGEGEKYVKAVF 1050
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +1
Query: 499 TAEKVIELPLMNPELFVRVGITPP-KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSA 675
T ++++ LPL PELF + +T P KG LL+GPPGTGKT+LA+AVA++ ANF+ + S+
Sbjct: 961 TLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1020
Query: 676 IVDKYIGESARLIREMF 726
I K+ GE + ++ +F
Sbjct: 1021 ITSKWFGEGEKYVKAVF 1037
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +1
Query: 499 TAEKVIELPLMNPELFVRVGITPP-KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSA 675
T +++ LP+ PELF R + P KG LL+GPPGTGKTLLA+A+A++ ANF+ + S
Sbjct: 161 TLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGST 220
Query: 676 IVDKYIGESARLIREMF 726
+ K+ G++ +L + +F
Sbjct: 221 LTSKWFGDAEKLTKALF 237
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPP-KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+++ LP+ PELF R + P KG LL+GPPGTGKTLLA+A+A++ ANF+ + S +
Sbjct: 365 ELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTS 424
Query: 685 KYIGESARLIREMF 726
K+ G++ +L + +F
Sbjct: 425 KWFGDAEKLTKALF 438
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
E+++E L NP+ +VR+G PP+G LL G PGTGKTLLA+AVA + D F+ +S V+
Sbjct: 342 EEIVEF-LKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVE 400
Query: 685 KYIGESARLIREMF 726
Y+G A +R++F
Sbjct: 401 LYVGMGASRVRDLF 414
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
E+++E L NPE +VR+G PP+G LL G PGTGKTLLA+AVA + + F+ +S V+
Sbjct: 338 EEIVEF-LRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVE 396
Query: 685 KYIGESARLIREMF 726
Y+G A +R++F
Sbjct: 397 LYVGMGASRVRDLF 410
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/71 (49%), Positives = 51/71 (71%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 693
++LPL++ +LF G+ G LLYGPPGTGKTLLA+AVA++ NFL V +++ YI
Sbjct: 674 VQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYI 732
Query: 694 GESARLIREMF 726
GES + +R++F
Sbjct: 733 GESEKNVRDIF 743
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+ +E P + + F R+G PP G L++GPPG KTL+ARAVAS+ NFL V + K
Sbjct: 738 EAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSK 797
Query: 688 YIGESARLIREMF 726
++GES + +R +F
Sbjct: 798 WVGESEKAVRSLF 810
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +1
Query: 553 VGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMF 726
+G+ P KG L++GPPGTGKT LAR A NF V I+ +Y+GES + + E+F
Sbjct: 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVF 470
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 74.5 bits (175), Expect = 6e-14
Identities = 32/74 (43%), Positives = 50/74 (67%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++++ LPL P+LF + P +G LL+GPPGTGKT+LA+A+A + A+F+ V S I
Sbjct: 534 QELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITS 593
Query: 685 KYIGESARLIREMF 726
K+ GE + +R +F
Sbjct: 594 KWFGEDEKNVRALF 607
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 74.5 bits (175), Expect = 6e-14
Identities = 32/74 (43%), Positives = 50/74 (67%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++++ LPL P+LF + P +G LL+GPPGTGKT+LA+A+A + A+F+ V S I
Sbjct: 529 QELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITS 588
Query: 685 KYIGESARLIREMF 726
K+ GE + +R +F
Sbjct: 589 KWFGEDEKNVRALF 602
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 73.3 bits (172), Expect = 1e-13
Identities = 31/74 (41%), Positives = 51/74 (68%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++++ LPL P+LF + P +G LL+GPPGTGKT++A+A+A++ A+F+ V S I
Sbjct: 427 QELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITS 486
Query: 685 KYIGESARLIREMF 726
K+ GE + +R +F
Sbjct: 487 KWFGEDEKNVRALF 500
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++V++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA + F +S V+
Sbjct: 263 QEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 321
Query: 685 KYIGESARLIREMF 726
++G A +R++F
Sbjct: 322 LFVGVGASRVRDLF 335
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++V++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA + F +S V+
Sbjct: 275 QEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 333
Query: 685 KYIGESARLIREMF 726
++G A +R++F
Sbjct: 334 LFVGVGASRVRDLF 347
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 72.1 bits (169), Expect = 3e-13
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
E+ + LPL PE F + P KG L++GPPGTGKTLLA+AVA++ F V S+ +
Sbjct: 252 EEAVVLPLWMPEYFQGIR-RPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLAS 310
Query: 685 KYIGESARLIREMF 726
K+ GES R++R +F
Sbjct: 311 KWRGESERMVRCLF 324
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/74 (43%), Positives = 53/74 (71%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ + +P+ P F + +TP KG LL+GPPGTGKT+LA+AVA++ + F + +S++V
Sbjct: 125 KEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVS 183
Query: 685 KYIGESARLIREMF 726
K+ G+S +LIR +F
Sbjct: 184 KWRGDSEKLIRVLF 197
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/74 (43%), Positives = 53/74 (71%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ + +P+ P F + +TP KG LL+GPPGTGKT+LA+AVA++ + F + +S++V
Sbjct: 116 KEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVS 174
Query: 685 KYIGESARLIREMF 726
K+ G+S +LIR +F
Sbjct: 175 KWRGDSEKLIRVLF 188
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 71.3 bits (167), Expect = 6e-13
Identities = 30/73 (41%), Positives = 48/73 (65%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+ I P+ P+++ G+ G LLYGPPG GKTL+A+A A++ ANF+ + + +++K
Sbjct: 542 RYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNK 601
Query: 688 YIGESARLIREMF 726
Y+GES IR +F
Sbjct: 602 YVGESELAIRTLF 614
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
E + P++NPE F ++G+ PP G L +GPPG GKT LA A+A++ F K+ ++ ++
Sbjct: 246 EMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVIS 305
Query: 685 KYIGESARLIREMF 726
G S IRE+F
Sbjct: 306 GVSGASEENIRELF 319
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGIT-PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+++ LPL PELF + P KG LLYGPPGTGKT+LA+A+A + +A F+ V S ++
Sbjct: 101 ELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMS 160
Query: 685 KYIGESARLIREMF 726
K+ G++ +L+ +F
Sbjct: 161 KWFGDAQKLVSAVF 174
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGIT-PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+++ LPL PELF + P KG LLYGPPGTGKT+LA+A+A + A F+ V S ++
Sbjct: 98 ELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMS 157
Query: 685 KYIGESARLIREMF 726
K+ G++ +L+ +F
Sbjct: 158 KWFGDAQKLVSAVF 171
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+V+E L PE F VG PKG LL GPPGTGKTLLA+A+A + F + S V+
Sbjct: 241 EVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 299
Query: 688 YIGESARLIREMF 726
++G A +R++F
Sbjct: 300 FVGVGASRVRDLF 312
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+V+E L PE F VG PKG LL GPPGTGKTLLA+A+A + F + S V+
Sbjct: 234 EVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 292
Query: 688 YIGESARLIREMF 726
++G A +R++F
Sbjct: 293 FVGVGASRVRDLF 305
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/68 (42%), Positives = 47/68 (69%)
Frame = +1
Query: 523 PLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 702
PL+ P++F +P KG LL+GPPGTGKT++ +A+A + A F + +S++ K+IGE
Sbjct: 29 PLLRPDIFKGCR-SPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEG 87
Query: 703 ARLIREMF 726
+L+R +F
Sbjct: 88 EKLVRALF 95
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/67 (44%), Positives = 44/67 (65%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 705
L NP+LF ++GI PP G LL GPPG GKTL+A+A+A + F ++ S V+ +G +
Sbjct: 449 LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGS 508
Query: 706 RLIREMF 726
IR++F
Sbjct: 509 ARIRDLF 515
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/73 (41%), Positives = 50/73 (68%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
+++ LP +LF + P +G LL+GPPG GKT+LA+AVAS+ A F V +S++ K
Sbjct: 230 EMVILPAKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSK 288
Query: 688 YIGESARLIREMF 726
++GE+ +L++ +F
Sbjct: 289 WVGEAEKLVKTLF 301
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/74 (43%), Positives = 49/74 (66%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ + LP+ P+ F P + LLYGPPGTGK+ LA+AVA++ D+ F V SS +V
Sbjct: 145 QEAVILPVKFPQFFTGKR-RPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVS 203
Query: 685 KYIGESARLIREMF 726
K++GES +L+ +F
Sbjct: 204 KWMGESEKLVSNLF 217
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
++ +E P+ + FV++GI+P +G LL+GPPG KT LA+A A+ A+F + + +
Sbjct: 299 QQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFS 358
Query: 685 KYIGESARLIREMF 726
Y+GE L+R F
Sbjct: 359 MYVGEGEALLRNTF 372
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
++I P P +G+ P+G LLYGPPGTGKT L RAV + DA+ + + ++
Sbjct: 36 ELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRA 95
Query: 688 YIGESARLIREMF 726
+ GES +++RE F
Sbjct: 96 HAGESEKVLREAF 108
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 705
L +P+ F R+G PKG LL GPPGTGKT+LARA+A + F S + ++G A
Sbjct: 246 LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGA 305
Query: 706 RLIREMF 726
R +R++F
Sbjct: 306 RRVRDLF 312
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
E+++E L PE F +G PKG LL GPPGTGKTLLA+A+A + F + S ++
Sbjct: 236 EEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIE 294
Query: 685 KYIGESARLIREMF 726
++G A R++F
Sbjct: 295 MFVGVGASRARDLF 308
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
E+V+E L NP F R+G PKG LL G PGTGKTLLA+A+A + F S +
Sbjct: 375 EEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEE 433
Query: 685 KYIGESARLIREMF 726
++G AR +R +F
Sbjct: 434 MFVGVGARRVRSLF 447
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLD-----ANFLKVVS 669
++++ PL+ PE F ITPP+G LL GPPGTGKTL+ARA+A +F
Sbjct: 394 KEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKG 453
Query: 670 SAIVDKYIGESARLIREMF 726
+ ++ K++GE+ R ++ +F
Sbjct: 454 ADVLSKWVGEAERQLKLLF 472
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSA--- 675
++V+ +PL+ PE F +G+TPP+G LL+G PGTGKTL+ RA+ L ++ A
Sbjct: 732 KEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKG 791
Query: 676 --IVDKYIGESARLIREMF 726
+ KY+G++ R +R +F
Sbjct: 792 ADCLGKYVGDAERQLRLLF 810
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +1
Query: 544 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREM 723
+ ++G P+G LL GPPGTGKTLLARAVA + F V +S V+ ++G A IR++
Sbjct: 359 YKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDL 418
Query: 724 F 726
F
Sbjct: 419 F 419
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 705
L N E F GI PKG LL+GPPGTGKTLLA+A+A + F + V+ ++G +A
Sbjct: 335 LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAA 394
Query: 706 RLIREMF 726
++++F
Sbjct: 395 SRVKDLF 401
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIR 717
E++ R G+ P G LL GPPG GKTLLA+AVA + NF + +S V+ Y+G A +R
Sbjct: 433 EMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVR 492
Query: 718 EMF 726
++
Sbjct: 493 ALY 495
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 705
L NP+ + +G PKG LL GPPGTGKTLLA+A A + FL + S ++ ++G
Sbjct: 341 LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGP 400
Query: 706 RLIREMF 726
+R +F
Sbjct: 401 SRVRHLF 407
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 705
L NP+ + +G PKG LL GPPGTGKTLLA+A A + FL + S ++ ++G
Sbjct: 346 LQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGP 405
Query: 706 RLIREMF 726
+R +F
Sbjct: 406 SRVRNLF 412
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 535 PELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS-AIVDKYIGESARL 711
P + R+GI KG LL+GPPGTGKTL+AR + L+ K+V+ ++ K++GE+ +
Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298
Query: 712 IREMF 726
+R++F
Sbjct: 299 VRDLF 303
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 562 TPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSS 672
+P CLL GP G+GKT LA + D ++K+VS+
Sbjct: 528 SPLVTCLLEGPSGSGKTALAATIGIDSDFPYVKIVSA 564
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+++IELP P++F + + LLYGPPG GKT + A A+ F+ V +++
Sbjct: 857 KEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLN 916
Query: 685 KYIGESARLIREMF 726
KYIG S + +R++F
Sbjct: 917 KYIGASEQAVRDIF 930
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 544 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 645
F + I P L+YGPPG+GKT+LARA A +
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAAKYFE 618
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 1025
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 499 TAEKVIELPLMNPELFVRVGITPP-KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSA 675
T ++++ LP PELF + +T P G LL+GP GTGKT+LA+AVA++ AN + + S
Sbjct: 746 TLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVATEAGANLINMSMS- 804
Query: 676 IVDKYIGESARLIREMF 726
++ E + ++ +F
Sbjct: 805 ---RWFSEGEKYVKAVF 818
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = +1
Query: 568 PKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMF 726
P+ L GPPGTGKT AR +A+Q L V A++ KY GES RL+ +F
Sbjct: 361 PRAVLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVF 413
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI-VDKYIGES 702
L NP+ F +G P+G L+ G GTGKT LA A+A++ + V + + ++G+S
Sbjct: 443 LQNPKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQS 502
Query: 703 ARLIREMF 726
A +RE+F
Sbjct: 503 AANVRELF 510
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 693
+E L E + RVG +G LLYGPPGTGK+ L A+A+ L + + S+I D
Sbjct: 225 LERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYDN-- 282
Query: 694 GESARLI 714
GE R++
Sbjct: 283 GELKRVL 289
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +1
Query: 532 NPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARL 711
NP + + +G LL GPPGTGKTL AR +A + F+ + D +A+
Sbjct: 514 NPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAK- 572
Query: 712 IREMF 726
I EMF
Sbjct: 573 INEMF 577
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
L E + RVG +G LLYGPPGTGK+ L A+A+ L + + S+I +
Sbjct: 230 LKRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYE 282
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
+ + RVG +G LLYGPPGTGKT L A+A+ L
Sbjct: 235 DFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANYL 269
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 678
E + ++G +G LLYGPPGTGK+ + A+A+ L+ N + +A+
Sbjct: 231 EYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAV 277
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
E + RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 243 EFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYL 277
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
E + RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 243 EFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYL 277
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 678
+ + RVG +G LLYGPPGTGK+ L A+A+ L+ + + +A+
Sbjct: 289 DFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLELTAV 335
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
+ + RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 235 DFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYL 269
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 14/76 (18%)
Frame = +1
Query: 541 LFVRVGITPP-----KGCLLYGPPGTGKTLLARAVASQLD---------ANFLKVVSSAI 678
LF + G+ P + LL+GPPGTGKT L +A+A +L ++V + ++
Sbjct: 188 LFTQKGVNPNLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSL 247
Query: 679 VDKYIGESARLIREMF 726
K+ ES +L+ ++F
Sbjct: 248 FSKWFSESGKLVAKLF 263
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 550 RVGITPPKGCLLYGPPGTGKTLLARAVASQLD 645
RVG +G LLYGPPGTGK+ L A+A+ L+
Sbjct: 241 RVGKAWKRGYLLYGPPGTGKSSLIAAIANHLN 272
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 678
E + R+G +G LLYGPPGTGK+ + A+A+ + N + ++I
Sbjct: 226 EYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDLELTSI 272
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+ F VG +G LLYGPPGTGK+ L A+A+ ++ + + ++ D
Sbjct: 21 DFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIYDLQIQSVKD 69
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 678
+ + ++G +G LLYGPPGTGK+ + A+A+ L+ + + +AI
Sbjct: 226 DYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTAI 272
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAI 678
E + ++G +G LL+GPPGTGK+ + A+A+ L+ + + +AI
Sbjct: 226 EYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDLELTAI 272
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+ + +VG +G LL+GPPGTGK+ + A+A+ LD + + + + D
Sbjct: 233 DYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIANFLDYDVYDLELTTVKD 281
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
+ F VG +G LLYGPPGTGK+ + A+A+ +
Sbjct: 229 DFFKSVGRAWKRGYLLYGPPGTGKSSMVAAIANHM 263
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+E L + + R+G + LLYGP GTGK+ A+A+ LD + + S +VD
Sbjct: 213 LESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVD 269
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVA 633
EK IE L N + P + L YGPPGTGKT+ AR +A
Sbjct: 378 EKRIE-QLANATANTKAHQAPFRNILFYGPPGTGKTMAARELA 419
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+ + ++G +G LL+GPPGTGK+ + A+A+ L+ + + + + D
Sbjct: 233 DYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKD 281
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 544 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
+ R G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 229 YERTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 35.5 bits (78), Expect = 0.036
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 565 PPKGCLLYGPPGTGKTLLARAVA 633
P + + YGPPGTGKT++AR +A
Sbjct: 369 PFRNMMFYGPPGTGKTMVAREIA 391
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 544 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
+ + G +G LLYGPPGTGK+ L A+A+ L
Sbjct: 230 YQKTGRAWKRGYLLYGPPGTGKSSLIAAMANYL 262
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+ + ++G +G LL+GPPGTGK+ + A+A+ L+ + + + + D
Sbjct: 230 DYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANFLEYDVYDLELTTVKD 278
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 35.5 bits (78), Expect = 0.036
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 565 PPKGCLLYGPPGTGKTLLARAVA 633
P + + YGPPGTGKT++AR +A
Sbjct: 384 PFRNMMFYGPPGTGKTMVAREIA 406
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
+ + RVG + LYGPPGTGK+ L A+A+ L
Sbjct: 210 DYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMANYL 244
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+ + +VG +G LL+GPPGTGK+ + A+A+ L+ + + + + D
Sbjct: 229 DYYRKVGKPWKRGYLLFGPPGTGKSTMISAMANFLEYDVYDLELTTVKD 277
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 35.1 bits (77), Expect = 0.048
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQL 642
L YGPPGTGKT A A+A QL
Sbjct: 34 LFYGPPGTGKTTTALAIAHQL 54
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 35.1 bits (77), Expect = 0.048
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQL 642
L YGPPGTGKT A A+A QL
Sbjct: 46 LFYGPPGTGKTTTALAIAHQL 66
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 34.7 bits (76), Expect = 0.063
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 544 FVRVGITPPKGCLLYGPPGTGKTLLARAVASQL 642
+ + G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 34.7 bits (76), Expect = 0.063
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +1
Query: 565 PPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMF 726
P + LL+GPPGTGKT+ AR +A + ++ +++ V ++ I E+F
Sbjct: 396 PFRNILLHGPPGTGKTMAARELARKSGLDY-ALMTGGDVAPLGAQAVTKIHELF 448
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 34.3 bits (75), Expect = 0.083
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 571 KGCLLYGPPGTGKTLLARAVASQLDAN--FLKVVSSAIVDKYIGESARLI 714
K LL GPPGTGKT LA ++ +L + F +V S + + ++ L+
Sbjct: 67 KALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLM 116
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 571 KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
+G LL+GPPGTGK+ + A+A+ L+ + + + + D
Sbjct: 229 RGYLLFGPPGTGKSTMISAIANFLEYDVYDLELTTVKD 266
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 34.3 bits (75), Expect = 0.083
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 556 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
G + K L GPPG GKT + R++A LD F + + D
Sbjct: 436 GTSQGKIICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSD 478
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLDAN 651
I+P + LL GPPG GKT L +A++ L+ N
Sbjct: 162 ISPGRLTLLLGPPGCGKTTLLKALSGNLENN 192
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 34.3 bits (75), Expect = 0.083
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 660
I P + LL GPPG+GK+ L A+A +LD + K
Sbjct: 183 IKPGRMTLLLGPPGSGKSTLLLALAGKLDKSLKK 216
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
+ GPPG GKT +ARA+ Q+ NF
Sbjct: 219 IVGPPGIGKTTIARALRDQISENF 242
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYI 693
I+L + + + RVG + LL+G PG GKT L A+A L+ + + D
Sbjct: 181 IDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYNITQGVKTD--- 237
Query: 694 GESARLIREM 723
++ RLIR +
Sbjct: 238 FDTRRLIRRV 247
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLD 645
I P + LL GPP +GKT L +A+A +LD
Sbjct: 196 IKPSRMTLLLGPPSSGKTTLLQALAGKLD 224
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK-YIGESARLI 714
LL GP G+GKTLLA+ +A ++ F+ ++ + Y+GE I
Sbjct: 227 LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESI 272
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 663
I P + LL GPP +GKT L A+A +LD + LKV
Sbjct: 170 IKPSRMTLLLGPPSSGKTTLLLALAGKLDQS-LKV 203
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLD 645
+ P + LL GPP +GKT L +A+A +LD
Sbjct: 198 VKPSRMTLLLGPPSSGKTTLLQALAGKLD 226
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
+YGP G GKT +ARA+ S+L ++F
Sbjct: 215 IYGPAGIGKTTIARALHSRLSSSF 238
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK-YIGESARLI 714
LL GP G+GKTLLA+ +A ++ F ++++ Y+GE I
Sbjct: 266 LLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESI 311
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT +ARA+ +QL NF
Sbjct: 210 IWGPAGIGKTTIARALYNQLSTNF 233
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 556 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
G + K L GPPG GKT + R++A L+ F + + D
Sbjct: 453 GTSQGKIICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLAD 495
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GPPG GKT +AR V +QL +F
Sbjct: 262 IWGPPGIGKTTIARVVYNQLSHSF 285
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLD 645
I P + LL GPPG GKT L A++ +LD
Sbjct: 159 IRPKRMTLLLGPPGCGKTTLLLALSGRLD 187
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQL 642
LLYGPPGTGKT AVA +L
Sbjct: 76 LLYGPPGTGKTSTILAVARKL 96
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 589 GPPGTGKTLLARAVASQLDANFLKVVSSAIVDK 687
GPPG GKT LA ++A+ L F+++ + D+
Sbjct: 408 GPPGVGKTSLASSIAAALGRKFVRLSLGGVKDE 440
>At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1127
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK-YIGES 702
++GP G GKT +ARA+ S+L F SS +DK +I +S
Sbjct: 213 IWGPSGIGKTTIARALFSRLSCQF---QSSVFIDKVFISKS 250
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK-YIGESARLI 714
LL GP G+GKTLLA+ +A ++ F+ ++ + Y+G+ I
Sbjct: 312 LLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESI 357
>At4g28070.1 68417.m04026 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 464
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLDANF 654
++P KG LYG GTGKT+L QL A++
Sbjct: 130 VSPVKGLYLYGGVGTGKTMLMDLFFHQLPASW 161
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 532 NPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 654
N +R+ + + ++GPPG GKT +AR + SQ+ +F
Sbjct: 211 NMRALLRLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSF 251
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT +AR + SQ +F
Sbjct: 1450 IWGPSGIGKTTIARFLFSQFSDSF 1473
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 696
LL GPPG GKT + R VA L ++ K V IG
Sbjct: 201 LLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIG 239
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLD 645
I P + LL GPP +GKT L A+A +LD
Sbjct: 194 IKPGRMTLLLGPPSSGKTTLLLALAGKLD 222
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLD 645
+ P + LL GPP +GKT L A+A +LD
Sbjct: 177 VKPGRMALLLGPPSSGKTTLLLALAGKLD 205
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLD 645
+ P + LL GPP +GKT L A+A +LD
Sbjct: 192 VKPSRMTLLLGPPSSGKTTLLLALAGKLD 220
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLDAN 651
I P + LL GPP +GKT L A+A +L N
Sbjct: 158 IRPSRLTLLLGPPSSGKTTLLLALAGRLGTN 188
>At4g30490.1 68417.m04329 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 497
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 541 LFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLK 660
L + +P KG LYG GTGKT+L QL + K
Sbjct: 152 LMPQTSYSPVKGLYLYGGVGTGKTMLMDLFFDQLPCTWKK 191
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF-LKVVSSAIVDKYIGES 702
++GP G GKT +ARA+ +Q NF L + + + Y GE+
Sbjct: 210 IWGPAGVGKTTIARALYNQYHENFNLSIFMENVRESY-GEA 249
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 568 PKGCLLY-GPPGTGKTLLARAVASQL--DANFL 657
P G L+ GP G GKT LA+A+A QL D N L
Sbjct: 598 PTGSFLFLGPTGVGKTELAKALAEQLFDDENLL 630
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 526 LMNPELFVRVGITPPK--GCLLYGPPGTGKTLLARA-VASQLDANFLKVVSSAIV 681
L++P +R + + + +GPPGTGKT +A++ + S D + + VS + V
Sbjct: 121 LLSPSSLLRSAVESNRLPSIVFWGPPGTGKTSIAKSLINSSKDPSLYRFVSLSAV 175
>At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 900
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT +ARA+ ++L NF
Sbjct: 212 IWGPAGIGKTTIARALFNRLSENF 235
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQL 642
+ P + LL GPPG GKT L +A++ +L
Sbjct: 161 VRPGRMTLLLGPPGCGKTTLLQALSGRL 188
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 568 PKGCLLY-GPPGTGKTLLARAVASQL 642
P G L+ GP G GKT LA+A+A QL
Sbjct: 563 PSGSFLFLGPTGVGKTELAKALAEQL 588
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLDAN 651
I P + LL GPP GKT L +A++ L+ N
Sbjct: 197 IKPGRLTLLLGPPSCGKTTLLKALSGNLENN 227
>At3g05790.1 68416.m00650 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 942
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 556 GITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVD 684
G + K L GP G GKT + R++A LD F + + D
Sbjct: 445 GTSQGKIICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSD 487
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT +ARA+ +QL F
Sbjct: 211 IWGPAGIGKTTIARALFNQLSTGF 234
>At5g38850.1 68418.m04699 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 986
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 589 GPPGTGKTLLARAVASQLDANF 654
GP G GKT +ARA+ S L +NF
Sbjct: 206 GPAGIGKTTIARALQSLLSSNF 227
>At5g38350.1 68418.m04628 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 833
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT +AR + SQ NF
Sbjct: 51 IWGPSGIGKTTIARVLYSQFSENF 74
>At4g15233.1 68417.m02334 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1168
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLD 645
I P + LL GPP GKT L A++ +LD
Sbjct: 161 IRPKRMTLLLGPPSCGKTTLLLALSGRLD 189
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF-LKVVSSAIVDKY 690
++GPPG GKT +AR++ +Q F L V +I Y
Sbjct: 263 IWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAY 299
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GPPG GKT + R + +QL ++F
Sbjct: 256 IWGPPGIGKTTIVRFLYNQLSSSF 279
>At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 992
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
+YGP G GKT +ARA+ S L F
Sbjct: 171 IYGPAGIGKTTIARALHSLLSDRF 194
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++G PG GKT LA+AV Q+ F
Sbjct: 168 IWGMPGIGKTTLAKAVFDQMSGEF 191
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++G PG GKT LA+AV Q+ F
Sbjct: 168 IWGMPGIGKTTLAKAVFDQMSGEF 191
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GK+ +ARA+ +QL ++F
Sbjct: 212 IWGPAGIGKSTIARALYNQLSSSF 235
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GPPG GKT +AR + +Q+ F
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GPPG GKT +AR + +Q+ F
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GPPG GKT +AR + +Q+ F
Sbjct: 294 IWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 538 ELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 654
E +R+ + + ++GPPG GKT +AR + +Q+ F
Sbjct: 283 EQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRF 321
>At3g30420.1 68416.m03847 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 837
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDA---NFLKVVSSAI 678
LYG GTGKT L + + S L + N + V SSAI
Sbjct: 374 LYGDGGTGKTFLYKTIISALRSNGKNVMPVASSAI 408
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKTLLARAVASQ 639
V + ++ + LLYGP G+GK+ L R +A +
Sbjct: 346 VSLAVSQKRPVLLYGPSGSGKSALIRKLADE 376
>At1g54430.1 68414.m06209 hypothetical protein
Length = 1639
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDA---NFLKVVSSAI 678
LYG GTGKT L + + S L + N + V SSAI
Sbjct: 1176 LYGAGGTGKTFLYKTIISALRSNGKNVMPVASSAI 1210
>At1g51940.1 68414.m05855 protein kinase family protein /
peptidoglycan-binding LysM domain-containing protein
contains protein kinases ATP-binding region signature,
PROSITE:PS00107
Length = 651
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -1
Query: 208 SFSLLSYCLVKSFSWSRPSLSRDSTSLCS--MSFFL*SWKAFSLNGSMSDVL 59
+F + L+ SFS S+P D+T LCS ++F ++FS+ SM DVL
Sbjct: 4 TFYIFFLSLLPSFSSSKPMNCSDTTRLCSSFLAFKPNQNQSFSVIQSMFDVL 55
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKTLLARAVASQ--LDANFLKVVSSAI 678
+R G + L+ G PGTGKT +A +A L+ F + S I
Sbjct: 59 IREGKIAGRAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEI 104
>At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++G PG GKT LA+AV Q+ + F
Sbjct: 177 IWGMPGIGKTTLAKAVFDQMSSAF 200
>At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1008
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT +ARA+ S++ +F
Sbjct: 210 IWGPSGIGKTTIARALFSRISRHF 233
>At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1210
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
+ GPPG GKT +AR + Q+ F
Sbjct: 260 ILGPPGIGKTTIARVLYDQISEKF 283
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQ 639
+ P + LL GPPG GKT L +A++ +
Sbjct: 164 VRPGRMTLLLGPPGCGKTTLLQALSGK 190
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 559 ITPPKGCLLYGPPGTGKTLLARAVASQLD 645
I P + LL GPPG+GK+ L +A++ + +
Sbjct: 169 IKPGRLTLLLGPPGSGKSTLLKALSGKTE 197
>At3g19670.1 68416.m02492 FF domain-containing protein / WW
domain-containing protein weak similarity to
huntingtin-interacting protein HYPA/FBP11 [Homo sapiens]
GI:3341980; contains Pfam profiles PF01846: FF domain,
PF00397: WW domain
Length = 960
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 60 STSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 206
ST E R++ F+DY L KE +R+K+ + +D+ +++DK +
Sbjct: 797 STIGDESFRKRCFEDYVSLL---KEQSNRIKQNKKVPEDVREEHDKGRD 842
>At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 966
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 589 GPPGTGKTLLARAVASQLDANF 654
GP G GKT +ARA+ S+L ++F
Sbjct: 215 GPSGIGKTTIARALHSRLSSSF 236
>At5g40060.1 68418.m04860 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein. False intron
created at intron 2 to escape a frameshift in the BAC
sequence.
Length = 1165
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT +ARA+ ++L +F
Sbjct: 210 IWGPSGIGKTTIARALFARLSRHF 233
>At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00023
ankyrin repeat, PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 481
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 541 LFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLD 645
L + +G P G PGTGKT++AR + L+
Sbjct: 236 LGLNIGTRRPPHMAFLGNPGTGKTMVARVLGKLLN 270
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 535 PELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQ 639
P++ G PP ++ GPPG GK+L+ +++ +
Sbjct: 72 PKIDRNYGEAPPFVVVVQGPPGVGKSLVIKSLVKE 106
>At5g49140.1 68418.m06082 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 980
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF 654
EK+++L +N + VGI +GP G GKT +AR + S+ +F
Sbjct: 194 EKMVQLLCLNDDDVRMVGI--------WGPAGIGKTTIARVLHSRFSGDF 235
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 481 SSRTD*TAEKV-IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF- 654
+S TD + IE + N + +++ + ++G G GKT +ARA+ +QL +F
Sbjct: 212 TSSTDSAENSIGIEDHIANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFP 271
Query: 655 -LKVVSSAIVDK 687
K + A V K
Sbjct: 272 VSKFIDRAFVYK 283
>At1g72850.1 68414.m08426 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 422
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT LAR ++ +NF
Sbjct: 197 IWGPGGIGKTTLARYAYEEISSNF 220
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 481 SSRTD*TAEKV-IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANF- 654
+S TD + IE + N + +++ + ++G G GKT +ARA+ +QL +F
Sbjct: 173 TSSTDSAENSIGIEDHIANMSVLLQLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFP 232
Query: 655 -LKVVSSAIVDK 687
K + A V K
Sbjct: 233 VSKFIDRAFVYK 244
>At3g51560.1 68416.m05646 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1253
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++G PG GKT LA+A QL ++
Sbjct: 185 IWGMPGIGKTTLAKAAFDQLSGDY 208
>At3g25620.1 68416.m03189 ABC transporter family protein similar to
GB:AAC61893 from [Bactrocera tryoni] (Insect Mol. Biol.
6 (4), 343-356 (1997))
Length = 467
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 556 GITPPKGCL-LYGPPGTGKTLLARAVASQLDANFLKVVS 669
GI P L + GP G+GKT L A+A +L VS
Sbjct: 105 GIVKPGELLAMLGPSGSGKTTLVTALAGRLQGKLSGTVS 143
>At1g65810.1 68414.m07468 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1050
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDANFLKV 663
L++GPPGTGKT S L NFLK+
Sbjct: 292 LIWGPPGTGKT----KTTSVLLLNFLKM 315
>At1g63870.1 68414.m07233 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1031
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 589 GPPGTGKTLLARAVASQLDANF 654
GP G GKT +ARA+ S+L F
Sbjct: 218 GPAGIGKTTIARALQSRLSNKF 239
>At5g48660.1 68418.m06022 expressed protein ; expression supported
by MPSS
Length = 219
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/53 (22%), Positives = 30/53 (56%)
Frame = +3
Query: 66 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
++++ EKA ++ ++ ++ + RLK+ + K+ K+ + +E + ALQ
Sbjct: 137 TELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLETAETHVTALQ 189
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1
RNA helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAV 630
L+ GPPGTGKT+ + A+
Sbjct: 507 LIQGPPGTGKTVTSAAI 523
>At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1123
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDK-YIGES 702
++G G GKT +ARA+ S L + F SS +D+ +I +S
Sbjct: 212 IWGTSGIGKTTIARALFSNLSSQF---QSSVYIDRAFISKS 249
>At5g46270.1 68418.m05696 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1145
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF--LKVVSSAIVDK 687
++G G GKT +ARA+ +QL +F K + A V K
Sbjct: 208 IWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYK 244
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKT 612
+ VG++ L+ GPPGTGKT
Sbjct: 266 IDVGLSRKSFVLIQGPPGTGKT 287
>At2g34450.1 68415.m04227 high mobility group (HMG1/2) family
protein similar to HMG protein [Arabidopsis thaliana]
GI:2832361; contains Pfam profile PF00505: HMG (high
mobility group) box
Length = 151
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 168 LKDLTKQYDKSENDLKALQSVGQIVGE 248
L D KQY + D+K+++ +G+ GE
Sbjct: 74 LDDFRKQYQEENPDVKSMREIGKTCGE 100
>At2g33793.1 68415.m04145 expressed protein
Length = 212
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 66 SDMEPLREKAFQDYRKKLMEH-KEVESRLKEGRDQLKDLTKQYDKSENDLKAL 221
S ++ REKA +D RKK E V + +K D+LK +K + +N KAL
Sbjct: 45 SALQQFREKAHEDGRKKKEESISSVSTEVKSKIDELK--SKLEKERQNFSKAL 95
>At2g03270.1 68415.m00280 DNA-binding protein, putative similar to
Swiss-Prot:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin
II gene enhancer-binding protein)(RIPE3B-binding complex
3B2 P110 subunit) (RIP-1)[Mesocricetus auratus];
identical to putative helicase (atpc-2 gene) cDNA
NCBI_gi:11191230
Length = 639
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDANFLKVVSSA--------IVDKYIGESARLIR 717
LL+GPPGTGKT + Q K+++ A IV++ + +L+R
Sbjct: 209 LLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNIAVDNIVERLVPHKVKLVR 262
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++GP G GKT +AR + SQ +F
Sbjct: 233 IWGPSGIGKTTIARILFSQFSDSF 256
>At1g63160.1 68414.m07138 replication factor C 40 kDa, putative
similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit
(Replication factor C 40 kDa subunit, A1 40 kDa subunit,
RF-C 40 kDa subunit, RFC40) [Mus musculus]
Length = 333
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQL 642
+L GPPGTGKT A+A +L
Sbjct: 52 ILSGPPGTGKTTSILALAHEL 72
>At1g59680.1 68414.m06713 F-box family protein similar to mDj6
GB:BAA88304 GI:6567123 from [Mus musculus]; contains
weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain
Length = 264
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 630 HSPREQSLSCTRRSVQQTSFGWSDTDSNKQLWV 532
HS + +LSC R+ +G ++TD + ++W+
Sbjct: 129 HSYDDVTLSCVRQEQLALLYGNNETDDSLEIWI 161
>At1g33290.2 68414.m04118 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 303
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 571 KGCLLYGPPGTGKTLLARAVASQLDANFLKVV 666
K L G PG GKT + R +A L F K V
Sbjct: 165 KSILFVGRPGVGKTTVLREIARVLSDEFQKRV 196
>At1g33290.1 68414.m04117 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 379
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 571 KGCLLYGPPGTGKTLLARAVASQLDANFLKVV 666
K L G PG GKT + R +A L F K V
Sbjct: 165 KSILFVGRPGVGKTTVLREIARVLSDEFQKRV 196
>At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1175
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
+ GP G GKT +AR + S+L + F
Sbjct: 147 ILGPSGIGKTTIARILYSKLSSQF 170
>At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1229
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
+ GP G GKT +AR + S+L + F
Sbjct: 211 ILGPSGIGKTTIARILYSKLSSQF 234
>At5g45210.1 68418.m05549 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 697
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
L+G PG GKT +A A Q+ +F
Sbjct: 196 LWGMPGIGKTTIAEAAFKQMSKDF 219
>At5g37160.1 68418.m04461 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 871
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQL 642
L++GPPGTGKT + S L
Sbjct: 269 LIWGPPGTGKTKTVATLLSTL 289
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANF 654
++G PG GKT LA+AV + + ++
Sbjct: 194 IWGMPGIGKTTLAKAVFNHMSTDY 217
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 132 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 230
++++R+ E DQL DLT + ++E D + Q+V
Sbjct: 478 KLKTRIAELEDQLSDLTAERYENERDSRLTQAV 510
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 39 KLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQ-LKDLTKQYDK--SEND 209
KL T+P S SD+ P + R+KL + +E++ KE + LK+L ++ S ++
Sbjct: 383 KLRTVPLSESDIFPSSFHKTPEGRRKLTK-EELQKFTKESTENALKELVSSPEEGSSGSE 441
Query: 210 LKALQSVGQIVGE 248
+A + + VGE
Sbjct: 442 KQAARGTSEPVGE 454
>At3g49830.1 68416.m05448 DNA helicase-related similar to DNA
helicase GI:4521249 from [Mus musculus]
Length = 473
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKTLLARAVASQL--DANFLKVVSSAI 678
+R G + L+ G PGTGK +A +A L + F + S I
Sbjct: 59 IRDGKISGRAILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEI 104
>At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1109
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIG 696
++GP G GKT +ARA+ S L F K + VD G
Sbjct: 211 IFGPAGIGKTTIARALHSLL--LFKKFQLTCFVDNLRG 246
>At1g17840.1 68414.m02208 ABC transporter family protein similar to
ABC transporter GI:10280532 from [Homo sapiens]
Length = 703
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 583 LYGPPGTGKTLLARAVASQLDAN 651
L GP G+GK+ + A+AS+L AN
Sbjct: 85 LMGPSGSGKSTMLDALASRLAAN 107
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARAVASQLDAN 651
L+ GPPGTGKT A+ S L A+
Sbjct: 1128 LIQGPPGTGKTRTIVAIISGLLAS 1151
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,714,874
Number of Sequences: 28952
Number of extensions: 327719
Number of successful extensions: 1385
Number of sequences better than 10.0: 185
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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