Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1656
(716 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 97 4e-22
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 97 4e-22
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 97 4e-22
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 97 5e-22
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 9.5
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 9.5
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 97.5 bits (232), Expect = 4e-22
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Frame = +3
Query: 252 KXXLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 431
K ++AH+ +LS CSPYF+++F N HPI++L+DV + +R LL FMYQGEVNV Q
Sbjct: 86 KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145
Query: 432 LASFISTAEQLQVKGLTGNQNEESSTHPNQSRLRGQ--APGRHNKDNL 569
L +F+ TAE L+V+GLT + + S S+LR + R +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSA-DTDSKLRSERIRDSRDERDSL 192
Score = 34.3 bits (75), Expect = 0.004
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 146 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 253
D+Q+ L WNN +N++ LL L DVTLA E
Sbjct: 50 DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACE 85
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 97.5 bits (232), Expect = 4e-22
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Frame = +3
Query: 252 KXXLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 431
K ++AH+ +LS CSPYF+++F N HPI++L+DV + +R LL FMYQGEVNV Q
Sbjct: 86 KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145
Query: 432 LASFISTAEQLQVKGLTGNQNEESSTHPNQSRLRGQ--APGRHNKDNL 569
L +F+ TAE L+V+GLT + + S S+LR + R +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSA-DTDSKLRSERIRDSRDERDSL 192
Score = 34.3 bits (75), Expect = 0.004
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 146 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 253
D+Q+ L WNN +N++ LL L DVTLA E
Sbjct: 50 DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACE 85
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 97.5 bits (232), Expect = 4e-22
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Frame = +3
Query: 252 KXXLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 431
K ++AH+ +LS CSPYF+++F N HPI++L+DV + +R LL FMYQGEVNV Q
Sbjct: 38 KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 97
Query: 432 LASFISTAEQLQVKGLTGNQNEESSTHPNQSRLRGQ--APGRHNKDNL 569
L +F+ TAE L+V+GLT + + S S+LR + R +D+L
Sbjct: 98 LQNFLKTAESLKVRGLTESSADRYSA-DTDSKLRSERIRDSRDERDSL 144
Score = 33.5 bits (73), Expect = 0.007
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 146 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 253
D+Q+ L WNN N++ LL L DVTLA E
Sbjct: 2 DQQYCLRWNNHQPNLTTVLTTLLQDEKLCDVTLACE 37
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 97.1 bits (231), Expect = 5e-22
Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Frame = +3
Query: 252 KXXLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 431
K ++AH+ +LS CSPYF+++F N HPI++L+DV + +R LL FMYQGEVNV Q
Sbjct: 86 KGMVKAHQAILSACSPYFEQIFVENKHLHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145
Query: 432 LASFISTAEQLQVKGLTGNQNEESSTHPNQSRLRGQ--APGRHNKDNL 569
L +F+ TAE L+V+GLT + + S S+LR + R +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSA-DTDSKLRSERIRDSRDERDSL 192
Score = 34.3 bits (75), Expect = 0.004
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 146 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 253
D+Q+ L WNN +N++ LL L DVTLA E
Sbjct: 50 DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACE 85
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.0 bits (47), Expect = 9.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 162 YAGTISTQICQRAF 203
Y GT+S +C+RA+
Sbjct: 50 YIGTVSLTLCERAY 63
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 23.0 bits (47), Expect = 9.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 162 YAGTISTQICQRAF 203
Y GT+S +C+RA+
Sbjct: 50 YIGTVSLTLCERAY 63
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,053
Number of Sequences: 2352
Number of extensions: 11910
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -