Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1656
(716 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 98 8e-23
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 82 4e-18
AB095513-1|BAC76335.1| 39|Apis mellifera brood-complex protein. 38 7e-05
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 26 0.31
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 24 1.7
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 3.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.0
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 6.7
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 22 6.7
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 6.7
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 97.9 bits (233), Expect = 8e-23
Identities = 46/96 (47%), Positives = 65/96 (67%)
Frame = +3
Query: 261 LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 440
L+AH++VLS CSPYF+E+ K P +HP++ L+DV+ S L L++F+Y GEVNV Q L+S
Sbjct: 43 LKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSS 102
Query: 441 FISTAEQLQVKGLTGNQNEESSTHPNQSRLRGQAPG 548
F+ TAE L+V GLT Q + + S +R A G
Sbjct: 103 FLKTAEVLRVSGLT--QQADQTDRDELSHVRALAAG 136
Score = 39.5 bits (88), Expect = 3e-05
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 137 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEG 256
M + F L WNN+ +++++ F L D VDVTLA +G
Sbjct: 1 MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDG 40
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 82.2 bits (194), Expect = 4e-18
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = +3
Query: 261 LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL-KDVSHSALRDLLQFMYQGEVNVKQEELA 437
L+AHK+VLS CS YFQ++ NP +HP + + +DV + L+ +++F+Y+GE++V Q EL
Sbjct: 47 LKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQ 106
Query: 438 SFISTAEQLQVKGL 479
S + TA+QL++KGL
Sbjct: 107 SLLKTADQLKIKGL 120
Score = 37.9 bits (84), Expect = 9e-05
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 149 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLA 247
+ + L WNN+ +NM++ FH LL VDVTLA
Sbjct: 9 QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLA 41
>AB095513-1|BAC76335.1| 39|Apis mellifera brood-complex protein.
Length = 39
Score = 38.3 bits (85), Expect = 7e-05
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 137 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 253
M + F L WNN+ +++++ F L D VDVTLA E
Sbjct: 1 MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 26.2 bits (55), Expect = 0.31
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 384 LLQFMYQGEVNVKQEELASFIS-TAEQLQVKGLTGNQNEESS 506
++ +Y G VNV+ E + S++ ++ V GN NE+++
Sbjct: 43 IIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEKNT 84
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.8 bits (49), Expect = 1.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 502 LSSF*LPVKPLT*SCSAVLINDANSSCLTLTSP 404
LSS P+T + S ++ N NS+C SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.6 bits (46), Expect = 3.8
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 113 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 244
V R +VA++ + F +CW FHA + S+ DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 509 PSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKP 607
P KP TS R + VM K T SKP
Sbjct: 137 PGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 509 PSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKP 607
P KP TS R + VM K T SKP
Sbjct: 137 PGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 509 PSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKP 607
P KP TS R + VM K T SKP
Sbjct: 137 PGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 509 PSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKP 607
P KP TS R + VM K T SKP
Sbjct: 137 PGKPTTTSDELKRGIINPEDVMLKRRTGEGSKP 169
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 509 PSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKP 607
P KP TS R + VM K T SKP
Sbjct: 137 PGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 509 PSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKP 607
P KP TS R + VM K T SKP
Sbjct: 137 PGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 509 PSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKP 607
P KP TS R + VM K T SKP
Sbjct: 137 PGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 509 PSKPKPTSRPGPRSSQQRQSVMTKLETDLDSKP 607
P KP TS R + VM K T SKP
Sbjct: 137 PGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 414 NVKQEELASFISTAEQLQVKGLTGNQNEESSTHPNQSRLR 533
NV +L + T + + +TG+Q+++ QSR+R
Sbjct: 469 NVDVSQLVTLF-TDFYVDLDAVTGHQSQQQQEEQTQSRVR 507
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 114 FHVESSLSWRRTNNFHY 164
+ +S SWR TNN Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = -3
Query: 564 CLCCDDL-GPG 535
C CCD+L GPG
Sbjct: 13 CWCCDNLGGPG 23
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,309
Number of Sequences: 438
Number of extensions: 3589
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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