Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1654
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H1K1 Cluster: Iron-sulfur cluster assembly enzyme ISC... 164 1e-39
UniRef50_Q6CFQ0 Cluster: Iron sulfur cluster assembly protein 1,... 143 4e-33
UniRef50_Q4WNS3 Cluster: Iron-sulfur cofactor synthesis protein ... 141 2e-32
UniRef50_A2QHV4 Cluster: Remark: alternate names for S. cerevisi... 140 2e-32
UniRef50_Q9UTC6 Cluster: Iron sulfur cluster assembly protein 1,... 135 1e-30
UniRef50_Q6E0I7 Cluster: Iron-sulfur cluster assembly protein; n... 134 2e-30
UniRef50_Q7QTV3 Cluster: GLP_76_35055_35693; n=4; Eukaryota|Rep:... 133 3e-30
UniRef50_Q4N9C2 Cluster: NifU protein, putative; n=11; cellular ... 121 2e-26
UniRef50_Q0CL81 Cluster: Iron sulfur cluster assembly protein 1,... 112 6e-24
UniRef50_Q896F6 Cluster: NifU protein; n=7; cellular organisms|R... 109 6e-23
UniRef50_Q38DM2 Cluster: Iron-sulfur cluster assembly protein, p... 109 8e-23
UniRef50_UPI0000E4A7B0 Cluster: PREDICTED: similar to NifU-like ... 104 2e-21
UniRef50_Q8TME1 Cluster: NifU protein; n=24; cellular organisms|... 103 4e-21
UniRef50_A4LX66 Cluster: Fe-S cluster assembly protein NifU; n=2... 101 2e-20
UniRef50_P05340 Cluster: Nitrogen fixation protein nifU; n=17; B... 99 8e-20
UniRef50_P20628 Cluster: Nitrogen fixation protein nifU; n=24; B... 99 8e-20
UniRef50_O34393 Cluster: NifU protein; n=24; cellular organisms|... 95 1e-18
UniRef50_Q2LWE9 Cluster: NifU-like protein involved in Fe-S clus... 92 9e-18
UniRef50_A6DAA5 Cluster: NifU family protein; n=2; Caminibacter ... 92 1e-17
UniRef50_Q7M7M7 Cluster: NIFU-LIKE PROTEIN; n=27; cellular organ... 89 9e-17
UniRef50_O67045 Cluster: NifU-like protein; n=4; cellular organi... 87 3e-16
UniRef50_Q4UGE0 Cluster: RNaseP-like protein with Nifu domain, p... 85 2e-15
UniRef50_P05343 Cluster: Nitrogen fixation protein nifU; n=4; Pr... 85 2e-15
UniRef50_Q8TSI9 Cluster: NifU family protein; n=5; Methanomicrob... 84 2e-15
UniRef50_Q8KB04 Cluster: IscU protein; n=10; Chlorobiaceae|Rep: ... 83 4e-15
UniRef50_Q2RIL0 Cluster: Nitrogen-fixing NifU-like; n=3; Clostri... 82 1e-14
UniRef50_A2ZW89 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_A4J289 Cluster: Nitrogen-fixing NifU domain protein; n=... 77 4e-13
UniRef50_Q07HZ2 Cluster: Nitrogen-fixing NifU domain protein; n=... 75 1e-12
UniRef50_Q3ZXT4 Cluster: NifU domain protein; n=3; Dehalococcoid... 75 2e-12
UniRef50_Q3A8K8 Cluster: NifU-like protein; n=3; Desulfuromonada... 73 8e-12
UniRef50_Q74DA8 Cluster: NifU-like domain protein; n=2; Desulfur... 69 7e-11
UniRef50_Q98AM0 Cluster: Nitrogen fixation protein; NifU; n=2; M... 67 3e-10
UniRef50_A5D4Q3 Cluster: NifU homolog; n=1; Pelotomaculum thermo... 66 5e-10
UniRef50_Q023P2 Cluster: Nitrogen-fixing NifU domain protein; n=... 66 9e-10
UniRef50_A0LFU2 Cluster: Nitrogen-fixing NifU domain protein; n=... 64 3e-09
UniRef50_A1AQD6 Cluster: Nitrogen-fixing NifU domain protein; n=... 62 1e-08
UniRef50_Q8TGK9 Cluster: Uncharacterized protein YPL135C-A; n=2;... 62 1e-08
UniRef50_Q8F7C7 Cluster: NifU-like protein; n=4; Leptospira|Rep:... 57 3e-07
UniRef50_A7DRZ9 Cluster: SUF system FeS assembly protein, NifU f... 57 3e-07
UniRef50_Q1AWB1 Cluster: TRNA (5-methylaminomethyl-2-thiouridyla... 56 1e-06
UniRef50_Q1IN98 Cluster: Nitrogen-fixing NifU-like; n=1; Acidoba... 54 2e-06
UniRef50_Q97E24 Cluster: NifU homolog involved in Fe-S cluster f... 53 5e-06
UniRef50_A7D1I7 Cluster: SUF system FeS assembly protein, NifU f... 53 5e-06
UniRef50_A0RXA5 Cluster: Fe-S cluster formation protein; n=1; Ce... 53 5e-06
UniRef50_A5UR74 Cluster: SUF system FeS assembly protein, NifU f... 53 7e-06
UniRef50_A1SV02 Cluster: SUF system FeS assembly protein, NifU f... 53 7e-06
UniRef50_Q7MYK4 Cluster: Similarities with nitrogen fixation pro... 52 1e-05
UniRef50_Q83CI7 Cluster: NifU family protein; n=2; Coxiella burn... 52 2e-05
UniRef50_Q62LM3 Cluster: NifU-like domain protein; n=14; Burkhol... 50 5e-05
UniRef50_Q2JUE7 Cluster: SUF system FeS assembly protein, NifU f... 50 6e-05
UniRef50_Q3E456 Cluster: Nitrogen-fixing NifU-like, N-terminal; ... 50 6e-05
UniRef50_Q1V2E5 Cluster: Putative nifU-like protein; n=2; Candid... 49 9e-05
UniRef50_Q1JIL3 Cluster: IscU protein; n=11; Streptococcus pyoge... 49 9e-05
UniRef50_A0LFS6 Cluster: Nitrogen-fixing NifU domain protein; n=... 49 1e-04
UniRef50_Q74JG6 Cluster: NifU-like protein; n=2; Lactobacillus|R... 48 2e-04
UniRef50_O32163 Cluster: NifU-like protein; n=40; Bacilli|Rep: N... 48 2e-04
UniRef50_Q88WY9 Cluster: NifU-like protein; n=53; Bacilli|Rep: N... 48 3e-04
UniRef50_Q2JCF1 Cluster: SUF system FeS assembly protein; n=37; ... 48 3e-04
UniRef50_Q7UU01 Cluster: Nitrogen fixation protein NifU; n=1; Pi... 47 3e-04
UniRef50_Q5UY39 Cluster: NifU-like protein; n=5; Halobacteriacea... 47 3e-04
UniRef50_A5EYF1 Cluster: SUF system FeS assembly protein, NifU f... 47 5e-04
UniRef50_A4EB20 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_A0LNT2 Cluster: Nitrogen-fixing NifU domain protein; n=... 46 8e-04
UniRef50_A4BSU8 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q83BY1 Cluster: NifU family protein; n=14; Bacteria|Rep... 44 0.002
UniRef50_A4M9C6 Cluster: SUF system FeS assembly protein, NifU f... 43 0.007
UniRef50_Q123X7 Cluster: SUF system FeS assembly protein; n=8; B... 42 0.010
UniRef50_Q6APN8 Cluster: Related to nitrogen fixation protein; n... 42 0.013
UniRef50_Q0AAQ4 Cluster: SUF system FeS assembly protein, NifU f... 42 0.013
UniRef50_Q9X192 Cluster: NifU-like protein; n=3; Thermotogaceae|... 42 0.017
UniRef50_Q9KFV2 Cluster: Nitrogen fixation protein; n=2; Bacillu... 41 0.023
UniRef50_A6Q4J9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.039
UniRef50_A3LER3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.039
UniRef50_Q8G5Y3 Cluster: Putative uncharacterized protein; n=4; ... 40 0.052
UniRef50_Q8F0D6 Cluster: NifU homolog involved in Fe-S cluster f... 40 0.052
UniRef50_A1ZYV1 Cluster: SUF system FeS assembly protein, NifU f... 40 0.069
UniRef50_Q3A7R9 Cluster: NifU-like protein; n=2; Desulfuromonada... 39 0.091
UniRef50_Q1WR14 Cluster: IscU protein; n=1; Lactobacillus saliva... 39 0.091
UniRef50_Q6MEW2 Cluster: Putative iron-sulfur cluster assembly p... 38 0.16
UniRef50_Q2LWF0 Cluster: NifU-like protein involved in Fe-S clus... 38 0.16
UniRef50_O83624 Cluster: Nitrogen fixation protein; n=2; Trepone... 38 0.16
UniRef50_Q14L11 Cluster: Putative iron-sulfur cluster assembly p... 38 0.21
UniRef50_Q98R36 Cluster: NITROGEN FIXATION PROTEIN NIFU; n=1; My... 38 0.28
UniRef50_A6Q975 Cluster: Putative uncharacterized protein; n=1; ... 37 0.37
UniRef50_A5UR82 Cluster: Nitrogen-fixing NifU domain protein; n=... 37 0.37
UniRef50_Q1AZN5 Cluster: SUF system FeS assembly protein; n=1; R... 37 0.49
UniRef50_A1IF14 Cluster: NifU protein; n=1; Candidatus Desulfoco... 37 0.49
UniRef50_Q97G09 Cluster: NifU-related domain containing protein;... 36 0.64
UniRef50_Q8EV25 Cluster: Nitrogen fixation protein NifU; n=1; My... 36 0.64
UniRef50_Q82UN6 Cluster: NifU-like N terminal domain; n=5; Bacte... 36 0.64
UniRef50_Q6KIL2 Cluster: Aminotransferase protein U homolog; n=1... 36 0.64
UniRef50_Q5K806 Cluster: Trehalose transport-related protein, pu... 36 0.64
UniRef50_Q8FF43 Cluster: Putative uncharacterized protein; n=1; ... 36 0.85
UniRef50_Q821N4 Cluster: NifU protein, putative; n=6; Chlamydoph... 36 0.85
UniRef50_Q73LQ8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.85
UniRef50_UPI00001D2CFF Cluster: UPI00001D2CFF related cluster; n... 36 1.1
UniRef50_Q9PQ37 Cluster: Conserved hypothetical; n=1; Ureaplasma... 34 2.6
UniRef50_A5IXL2 Cluster: Nitrogen fixation protein NifU; n=1; My... 34 2.6
UniRef50_Q4ZVI2 Cluster: Amino acid adenylation; n=4; Pseudomona... 33 6.0
UniRef50_Q2JM75 Cluster: WD-repeat/protein kinase domain protein... 33 6.0
UniRef50_Q0FGM6 Cluster: NifU-related protein involved in Fe-S c... 33 7.9
UniRef50_A7BC55 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q01180 Cluster: Nitrogen fixation protein nifU; n=4; Rh... 33 7.9
>UniRef50_Q9H1K1 Cluster: Iron-sulfur cluster assembly enzyme ISCU,
mitochondrial precursor; n=320; cellular organisms|Rep:
Iron-sulfur cluster assembly enzyme ISCU, mitochondrial
precursor - Homo sapiens (Human)
Length = 167
Score = 164 bits (399), Expect = 1e-39
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
LVGAPACGDVMKLQI VDE GKIVDA+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KN
Sbjct: 63 LVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKN 122
Query: 436 TDIAKELSLPPVKLHCSMLAEDAIK 510
TDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 123 TDIAKELCLPPVKLHCSMLAEDAIK 147
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 3/34 (8%)
Frame = +2
Query: 161 LAAP---YHANVIDHYENPRNVGSLDKKDKNVGT 253
L+AP YH V+DHYENPRNVGSLDK KNVGT
Sbjct: 28 LSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGT 61
>UniRef50_Q6CFQ0 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial precursor; n=5; Ascomycota|Rep: Iron
sulfur cluster assembly protein 1, mitochondrial
precursor - Yarrowia lipolytica (Candida lipolytica)
Length = 181
Score = 143 bits (346), Expect = 4e-33
Identities = 70/85 (82%), Positives = 75/85 (88%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
LVGAPACGDVMKLQI VD+NG I D KFKTFGCGSAIASSS TE V+GK++ EA K+KN
Sbjct: 65 LVGAPACGDVMKLQIRVDDNGVIQDVKFKTFGCGSAIASSSYVTELVRGKSLAEAGKIKN 124
Query: 436 TDIAKELSLPPVKLHCSMLAEDAIK 510
T IAKELSLPPVKLHCSMLAEDAIK
Sbjct: 125 TVIAKELSLPPVKLHCSMLAEDAIK 149
Score = 49.6 bits (113), Expect = 6e-05
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 146 SPNVILAAPYHANVIDHYENPRNVGSLDKKDKNVGT 253
+P I YH V+DHY NPRNVGS++K D++VGT
Sbjct: 28 TPLAISRRGYHEKVLDHYNNPRNVGSMNKNDEDVGT 63
>UniRef50_Q4WNS3 Cluster: Iron-sulfur cofactor synthesis protein
(Isu1), putative; n=2; Eurotiomycetidae|Rep: Iron-sulfur
cofactor synthesis protein (Isu1), putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 255
Score = 141 bits (341), Expect = 2e-32
Identities = 69/86 (80%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVDEN-GKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 432
LVGAPACGDVMKLQI VD++ KI D KFKTFGCGSAIASSS TE V+G T+DEA K++
Sbjct: 132 LVGAPACGDVMKLQIRVDKDTSKITDVKFKTFGCGSAIASSSYLTELVRGMTLDEAAKIR 191
Query: 433 NTDIAKELSLPPVKLHCSMLAEDAIK 510
NTDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 192 NTDIAKELCLPPVKLHCSMLAEDAIK 217
>UniRef50_A2QHV4 Cluster: Remark: alternate names for S. cerevisiae
Isu2: Nua2; n=8; cellular organisms|Rep: Remark:
alternate names for S. cerevisiae Isu2: Nua2 -
Aspergillus niger
Length = 198
Score = 140 bits (340), Expect = 2e-32
Identities = 69/86 (80%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 432
LVGAPACGDVMKLQI VD ++ KI D KFKTFGCGSAIASSS TE V+G T+DEA K++
Sbjct: 73 LVGAPACGDVMKLQIRVDKDSNKISDVKFKTFGCGSAIASSSYLTELVRGMTLDEAAKIR 132
Query: 433 NTDIAKELSLPPVKLHCSMLAEDAIK 510
NTDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 133 NTDIAKELCLPPVKLHCSMLAEDAIK 158
Score = 39.9 bits (89), Expect = 0.052
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 173 YHANVIDHYENPRNVGSLDKKDKNVGT 253
YH V+DHY NPRNVGS+ K +VGT
Sbjct: 46 YHEKVLDHYSNPRNVGSM-AKSMDVGT 71
>UniRef50_Q9UTC6 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial precursor; n=6; Dikarya|Rep: Iron sulfur
cluster assembly protein 1, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 135 bits (326), Expect = 1e-30
Identities = 65/85 (76%), Positives = 72/85 (84%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
LVGAPACGDVM+L I V+++G I D KFKTFGCGSAIASSS T VKG T++EA K+KN
Sbjct: 82 LVGAPACGDVMRLAIRVNKDGVIEDVKFKTFGCGSAIASSSYVTTMVKGMTLEEASKIKN 141
Query: 436 TDIAKELSLPPVKLHCSMLAEDAIK 510
T IAKEL LPPVKLHCSMLAEDAIK
Sbjct: 142 TQIAKELCLPPVKLHCSMLAEDAIK 166
Score = 46.0 bits (104), Expect = 8e-04
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 173 YHANVIDHYENPRNVGSLDKKDKNVG 250
YH NV+DHY NPRNVG+L K D +VG
Sbjct: 54 YHKNVLDHYNNPRNVGTLPKGDPDVG 79
>UniRef50_Q6E0I7 Cluster: Iron-sulfur cluster assembly protein; n=1;
Toxoplasma gondii|Rep: Iron-sulfur cluster assembly
protein - Toxoplasma gondii
Length = 219
Score = 134 bits (324), Expect = 2e-30
Identities = 68/104 (65%), Positives = 84/104 (80%)
Frame = +1
Query: 235 R*KCRYSLVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVD 414
R K ++VG ACGDV+KLQ+ V E+GKI DA+FKTFGCGSAIASSS ATE +KGKT D
Sbjct: 91 RSKVGTAVVGKAACGDVIKLQVLV-EDGKIRDARFKTFGCGSAIASSSYATELIKGKTCD 149
Query: 415 EALKLKNTDIAKELSLPPVKLHCSMLAEDAIKQRYQITESDNRQ 546
+ALKLKNTDIA+ L+LPPVK+HCS+LAEDA+ R+ I + +Q
Sbjct: 150 DALKLKNTDIAEYLNLPPVKVHCSLLAEDAV--RHAILDYQKKQ 191
>UniRef50_Q7QTV3 Cluster: GLP_76_35055_35693; n=4; Eukaryota|Rep:
GLP_76_35055_35693 - Giardia lamblia ATCC 50803
Length = 212
Score = 133 bits (322), Expect = 3e-30
Identities = 61/86 (70%), Positives = 77/86 (89%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
LVGAPACGDVM+LQI V ++GKI +AKFKTFGCG+AIASSS AT ++GK+++EA ++KN
Sbjct: 108 LVGAPACGDVMRLQIKVGDDGKISEAKFKTFGCGAAIASSSYATSLLQGKSLEEASQIKN 167
Query: 436 TDIAKELSLPPVKLHCSMLAEDAIKQ 513
TDI+ +L LPPVKLHCS+LAEDAI+Q
Sbjct: 168 TDISDKLGLPPVKLHCSVLAEDAIRQ 193
>UniRef50_Q4N9C2 Cluster: NifU protein, putative; n=11; cellular
organisms|Rep: NifU protein, putative - Theileria parva
Length = 301
Score = 121 bits (291), Expect = 2e-26
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = +1
Query: 253 SLVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 432
++VG ACGDV+KLQ+ + + I DA FKTFGCGSAIASSS TE VKGKT +EAL +K
Sbjct: 205 AIVGKAACGDVIKLQVKIKDQ-VIEDACFKTFGCGSAIASSSYVTEMVKGKTCEEALAIK 263
Query: 433 NTDIAKELSLPPVKLHCSMLAEDAIK 510
NTDI+ +L+LPPVK+HCS+LAEDA+K
Sbjct: 264 NTDISDKLNLPPVKIHCSLLAEDAVK 289
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 173 YHANVIDHYENPRNVGSLDKKDKNVGTA 256
Y V DH+ NPRNVGS DK D +VGTA
Sbjct: 178 YSPEVKDHFNNPRNVGSFDKDDPSVGTA 205
>UniRef50_Q0CL81 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial; n=1; Aspergillus terreus NIH2624|Rep:
Iron sulfur cluster assembly protein 1, mitochondrial -
Aspergillus terreus (strain NIH 2624)
Length = 179
Score = 112 bits (270), Expect = 6e-24
Identities = 65/106 (61%), Positives = 71/106 (66%), Gaps = 21/106 (19%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVDE---------------------NGKIVDAKFKTFGCGSAIAS 372
LVGAPACGDVMKLQI VD+ N +D KFKTFGCGSAIAS
Sbjct: 31 LVGAPACGDVMKLQIRVDKDTNTISGTPPPSIIDIMDDPANMLTIDVKFKTFGCGSAIAS 90
Query: 373 SSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIK 510
SS TE V+G T++EA K+ N IAKEL LPPVKLHCSMLAEDAIK
Sbjct: 91 SSYLTELVRGMTLEEAGKVTNVAIAKELCLPPVKLHCSMLAEDAIK 136
Score = 39.5 bits (88), Expect = 0.069
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = +2
Query: 185 VIDHYENPRNVGSLDKKDKNVGT 253
++DHY NPRNVGS+++KD +VG+
Sbjct: 7 LLDHYNNPRNVGSMNRKDLDVGS 29
>UniRef50_Q896F6 Cluster: NifU protein; n=7; cellular organisms|Rep:
NifU protein - Clostridium tetani
Length = 158
Score = 109 bits (262), Expect = 6e-23
Identities = 53/84 (63%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
VG P CGD+MK+ + V++N I D KFKTFGCGSAIASSS+ATE +KGKT++EA +L N
Sbjct: 45 VGNPKCGDIMKIYLKVEDN-IIKDVKFKTFGCGSAIASSSMATELIKGKTLEEAWELSNK 103
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAI 507
+A L LPPVK+HCS+LAE+AI
Sbjct: 104 AVADALDGLPPVKMHCSVLAEEAI 127
>UniRef50_Q38DM2 Cluster: Iron-sulfur cluster assembly protein,
putative; n=2; Trypanosoma|Rep: Iron-sulfur cluster
assembly protein, putative - Trypanosoma brucei
Length = 180
Score = 109 bits (261), Expect = 8e-23
Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 432
L GAP CGD+ ++Q+ V+ ++ D KFK FGCGSAIA+SS A++ ++GKT+ EAL+L
Sbjct: 50 LRGAPECGDMTQMQVKVNPETMVIEDVKFKAFGCGSAIAASSYASQAIRGKTLAEALQLT 109
Query: 433 NTDIAKELSLPPVKLHCSMLAEDAIK 510
N IA+ELSLPPVKLHCSMLAE+ I+
Sbjct: 110 NKRIARELSLPPVKLHCSMLAEETIQ 135
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 161 LAAPYHANVIDHYENPRNVGSLDKKDKNVGT 253
L + Y V +HY NPRNVG LDK D NVGT
Sbjct: 18 LRSLYSPLVEEHYNNPRNVGKLDKSDPNVGT 48
>UniRef50_UPI0000E4A7B0 Cluster: PREDICTED: similar to NifU-like
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to NifU-like protein -
Strongylocentrotus purpuratus
Length = 163
Score = 104 bits (249), Expect = 2e-21
Identities = 54/90 (60%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXV-DENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 432
LVGAPACGDVMKLQ+ + D+ I + GC S +++S T +G VDEA +K
Sbjct: 60 LVGAPACGDVMKLQVQISDKKHGIDNVAISDVGCCSLMSTSMEYTNLCRGMHVDEAKDIK 119
Query: 433 NTDIAKELSLPPVKLHCSMLAEDAIKQRYQ 522
NTDIAKELSLPPVKLHCSMLAEDAIK Q
Sbjct: 120 NTDIAKELSLPPVKLHCSMLAEDAIKAALQ 149
Score = 59.7 bits (138), Expect = 6e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +2
Query: 164 AAPYHANVIDHYENPRNVGSLDKKDKNVGT 253
+A YH NVIDHYENPRNVG++DK DKNVGT
Sbjct: 29 SASYHKNVIDHYENPRNVGAMDKNDKNVGT 58
>UniRef50_Q8TME1 Cluster: NifU protein; n=24; cellular
organisms|Rep: NifU protein - Methanosarcina acetivorans
Length = 128
Score = 103 bits (247), Expect = 4e-21
Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
VG CGD+MK+ + V E +IVD KF+TFGCG+AIASSS+ATE +KGK + EA +L N
Sbjct: 29 VGNAKCGDIMKIFLKV-EGDRIVDVKFQTFGCGAAIASSSMATELIKGKILKEAWELSNK 87
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAIKQ 513
+A+ L LPP+K+HCSMLAE+AI +
Sbjct: 88 AVAEALDGLPPIKMHCSMLAEEAIHE 113
Score = 32.7 bits (71), Expect = 7.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 173 YHANVIDHYENPRNVGSLDKKD 238
Y A V+DH+ NPRN+GS+ D
Sbjct: 3 YSAKVLDHFSNPRNMGSIANCD 24
>UniRef50_A4LX66 Cluster: Fe-S cluster assembly protein NifU; n=20;
cellular organisms|Rep: Fe-S cluster assembly protein
NifU - Geobacter bemidjiensis Bem
Length = 284
Score = 101 bits (241), Expect = 2e-20
Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENG-KIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
VG+ ACGD +KL I +DE +IVDA+F+TFGCGSAIASSS TE VKGKT+DEAL++ N
Sbjct: 30 VGSLACGDALKLFIKLDEKKERIVDARFQTFGCGSAIASSSALTEMVKGKTLDEALQISN 89
Query: 436 TDIAKEL-SLPPVKLHCSMLAEDAIK 510
+IA L LP K+HCS++ ++A++
Sbjct: 90 QEIADFLGGLPEEKMHCSVMGQEALE 115
>UniRef50_P05340 Cluster: Nitrogen fixation protein nifU; n=17;
Bacteria|Rep: Nitrogen fixation protein nifU -
Azotobacter vinelandii
Length = 312
Score = 99.1 bits (236), Expect = 8e-20
Identities = 49/86 (56%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
VG+ +CGD ++L + VD E I+DA F+TFGCGSAIASSS TE VKG T+DEALK+ N
Sbjct: 30 VGSLSCGDALRLTLKVDPETDVILDAGFQTFGCGSAIASSSALTEMVKGLTLDEALKISN 89
Query: 436 TDIAKEL-SLPPVKLHCSMLAEDAIK 510
DIA L LPP K+HCS++ +A++
Sbjct: 90 QDIADYLDGLPPEKMHCSVMGREALQ 115
>UniRef50_P20628 Cluster: Nitrogen fixation protein nifU; n=24;
Bacteria|Rep: Nitrogen fixation protein nifU - Anabaena
sp. (strain PCC 7120)
Length = 300
Score = 99.1 bits (236), Expect = 8e-20
Identities = 48/86 (55%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
VG+ ACGD ++L I V+ E+ KIVD++F+TFGC SAIASSS TE +KG T+DEALK+ N
Sbjct: 36 VGSIACGDALRLHIKVEVESDKIVDSRFQTFGCTSAIASSSALTEMIKGLTLDEALKVSN 95
Query: 436 TDIAKEL-SLPPVKLHCSMLAEDAIK 510
DIA L LP K+HCS++ ++A++
Sbjct: 96 KDIADYLGGLPEAKMHCSVMGQEALE 121
>UniRef50_O34393 Cluster: NifU protein; n=24; cellular
organisms|Rep: NifU protein - Archaeoglobus fulgidus
Length = 153
Score = 95.5 bits (227), Expect = 1e-18
Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
VG P CGD+M + I V +N +I D KF+TFGC +AIA+SS+ATE KGKT++EALK+
Sbjct: 28 VGNPVCGDLMTIYIKVKDN-RIEDIKFQTFGCAAAIATSSMATEMAKGKTIEEALKITRD 86
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAIKQ 513
+A+ L LP K+HCS LA DA+++
Sbjct: 87 AVAEALGGLPKQKMHCSNLAADALRR 112
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 173 YHANVIDHYENPRNVGSLDKKDKNVGT 253
Y V DH++NPRNVG ++ D VGT
Sbjct: 2 YSDKVFDHFQNPRNVGKIEDAD-GVGT 27
>UniRef50_Q2LWE9 Cluster: NifU-like protein involved in Fe-S cluster
formation with 2Fe-2S domain; n=1; Syntrophus
aciditrophicus SB|Rep: NifU-like protein involved in
Fe-S cluster formation with 2Fe-2S domain - Syntrophus
aciditrophicus (strain SB)
Length = 229
Score = 92.3 bits (219), Expect = 9e-18
Identities = 43/86 (50%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
VG+ ACGD ++L +DEN +I +AKFK+FGC SAIA++S+ TE V G T+++A K+ N
Sbjct: 30 VGSLACGDALRLTFKLDENKRIKEAKFKSFGCASAIAAASVLTEMVVGLTIEQAEKITNQ 89
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAIKQ 513
DIA L LP K+HCS+L E +++
Sbjct: 90 DIAAALGGLPEQKMHCSVLGEQVLEK 115
>UniRef50_A6DAA5 Cluster: NifU family protein; n=2; Caminibacter
mediatlanticus TB-2|Rep: NifU family protein -
Caminibacter mediatlanticus TB-2
Length = 321
Score = 91.9 bits (218), Expect = 1e-17
Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
G+ ACGD ++L VD + KI+DA+FK+FGCG+AIASS + TE GKTVDEA+K+ N
Sbjct: 50 GSEACGDAVRLYWLVDPKTDKIIDARFKSFGCGTAIASSDVMTELTIGKTVDEAMKVTNL 109
Query: 439 DIAKEL-------SLPPVKLHCSMLAEDAIKQ 513
D+ K L + PP K+HCS++A D I +
Sbjct: 110 DVEKALRDEPNKPAFPPQKMHCSVMAYDVIME 141
>UniRef50_Q7M7M7 Cluster: NIFU-LIKE PROTEIN; n=27; cellular
organisms|Rep: NIFU-LIKE PROTEIN - Wolinella
succinogenes
Length = 327
Score = 89.0 bits (211), Expect = 9e-17
Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
GA +CGD ++L +D + +I+DAKFK+FGCG+AIASS + E GKTVDEA+K+ N
Sbjct: 50 GAESCGDAVRLYWLIDPKTDRIIDAKFKSFGCGTAIASSDMMVELCLGKTVDEAIKITNI 109
Query: 439 DIAKEL-------SLPPVKLHCSMLAEDAIKQ 513
D+ K L ++P K+HCS++A D IK+
Sbjct: 110 DVEKALRDDPETPAVPGQKMHCSVMAYDVIKK 141
>UniRef50_O67045 Cluster: NifU-like protein; n=4; cellular
organisms|Rep: NifU-like protein - Aquifex aeolicus
Length = 157
Score = 87.4 bits (207), Expect = 3e-16
Identities = 46/84 (54%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
G PACGD M I V+ EN I D +FKTFGCGSAIA SS+ TE VKGK + AL L
Sbjct: 32 GNPACGDAMLFTIKVNPENDVIEDVRFKTFGCGSAIAVSSMLTEMVKGKPIQYALNLTYK 91
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAI 507
DI +EL LPP K+HC+ L + +
Sbjct: 92 DIFEELGGLPPQKIHCTNLGLETL 115
>UniRef50_Q4UGE0 Cluster: RNaseP-like protein with Nifu domain,
putative; n=1; Theileria annulata|Rep: RNaseP-like
protein with Nifu domain, putative - Theileria annulata
Length = 261
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/65 (64%), Positives = 50/65 (76%)
Frame = +1
Query: 253 SLVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 432
++VG ACGDV+KLQ+ + + I DA FKTFGCGSAIASSS TE VKGKT EAL +K
Sbjct: 181 AIVGKAACGDVIKLQVKIKDE-VIEDACFKTFGCGSAIASSSYVTEMVKGKTCKEALAIK 239
Query: 433 NTDIA 447
NTDI+
Sbjct: 240 NTDIS 244
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +2
Query: 143 GSPNVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTA 256
G + L Y V DH+ NPRNVGS DK D +VGTA
Sbjct: 144 GINRINLVRRYSPEVNDHFNNPRNVGSFDKDDPSVGTA 181
>UniRef50_P05343 Cluster: Nitrogen fixation protein nifU; n=4;
Proteobacteria|Rep: Nitrogen fixation protein nifU -
Klebsiella pneumoniae
Length = 274
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVD-AKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
VG+ +CGD ++L + VD +I++ A F+TFGCGSAIASSS TE + G T+ EA ++ N
Sbjct: 30 VGSLSCGDALRLMLRVDPQSEIIEEAGFQTFGCGSAIASSSALTELIIGHTLAEAGQITN 89
Query: 436 TDIAKEL-SLPPVKLHCSMLAEDAIK 510
IA L LPP K+HCS++ ++A++
Sbjct: 90 QQIADYLDGLPPEKMHCSVMGQEALR 115
>UniRef50_Q8TSI9 Cluster: NifU family protein; n=5;
Methanomicrobia|Rep: NifU family protein -
Methanosarcina acetivorans
Length = 220
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 LVGAPACGDVMKLQIXVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 432
L G+PACGD++ + I V+ K++ D KF+++GC S IA+ S+ T+ KGKT+DEA K+
Sbjct: 39 LEGSPACGDMVAVYIKVEPETKVIEDVKFESYGCASNIATGSVITDLAKGKTLDEAKKIT 98
Query: 433 NTDIAKEL-SLPPVKLHCSMLAEDAIK 510
++EL LPP+K HCS+LA + ++
Sbjct: 99 WKQASEELGGLPPIKAHCSVLAVEGLR 125
>UniRef50_Q8KB04 Cluster: IscU protein; n=10; Chlorobiaceae|Rep:
IscU protein - Chlorobium tepidum
Length = 203
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/81 (49%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Frame = +1
Query: 274 CGDVMKLQIXVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAK 450
CGD M + I VD E+ KI D ++KT+GC SAIAS+S+ +E VKG T+D+A + ++AK
Sbjct: 43 CGDQMMVAIKVDKESEKITDCQWKTYGCASAIASTSILSEMVKGMTLDQAFNISPKEVAK 102
Query: 451 EL-SLPPVKLHCSMLAEDAIK 510
EL LP K+HCS+L + A++
Sbjct: 103 ELGGLPENKIHCSVLGDKALR 123
>UniRef50_Q2RIL0 Cluster: Nitrogen-fixing NifU-like; n=3;
Clostridia|Rep: Nitrogen-fixing NifU-like - Moorella
thermoacetica (strain ATCC 39073)
Length = 139
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
+G P CGD + + I V +N ++VD KF+ GC +AIA+SS+ TE +GKT++E L++ +
Sbjct: 28 IGDPGCGDYLCIYIKVRDN-RLVDVKFQVHGCPAAIATSSILTEMARGKTLEEGLRITDA 86
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAI 507
D+A + LP VKLHCS L A+
Sbjct: 87 DVAAAIGGLPEVKLHCSNLGASAL 110
>UniRef50_A2ZW89 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 156
Score = 77.4 bits (182), Expect = 3e-13
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +1
Query: 382 ATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIK 510
ATEWVKGK ++E + +KNT+IAK LSLPPVKLHCSMLAEDAIK
Sbjct: 90 ATEWVKGKQMEEVVTIKNTEIAKHLSLPPVKLHCSMLAEDAIK 132
>UniRef50_A4J289 Cluster: Nitrogen-fixing NifU domain protein; n=2;
Clostridiales|Rep: Nitrogen-fixing NifU domain protein -
Desulfotomaculum reducens MI-1
Length = 163
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
+G CGDV ++ I V+E +I D KF+ +GC A+A+SS TE KGK +EALKL +
Sbjct: 41 IGEADCGDVCEITILVEEE-QINDIKFRVYGCVGAVATSSAVTELAKGKHCEEALKLTDD 99
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAIKQ 513
D+ + L LP K HCS+L A+KQ
Sbjct: 100 DVVEFLDGLPDQKKHCSLLGIRALKQ 125
>UniRef50_Q07HZ2 Cluster: Nitrogen-fixing NifU domain protein; n=6;
Rhizobiales|Rep: Nitrogen-fixing NifU domain protein -
Rhodopseudomonas palustris (strain BisA53)
Length = 339
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDE-NGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
VGA GD +KL + +D +I A+F+T+GC SAIA+SS TE + GK++DEAL++
Sbjct: 33 VGALDYGDAVKLMLRIDPATDRIEQARFQTYGCSSAIAASSAITEMIIGKSIDEALEISA 92
Query: 436 TDIAKEL-SLPPVKLHCSMLAEDAIKQ 513
D+A+ L LP +++CS++ +A+++
Sbjct: 93 ADVAEFLGGLPDERMYCSVMTYEAVQK 119
>UniRef50_Q3ZXT4 Cluster: NifU domain protein; n=3;
Dehalococcoides|Rep: NifU domain protein -
Dehalococcoides sp. (strain CBDB1)
Length = 127
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 441
G CGDV + I V +N ++V+ KFKT+GCG+A+A SSL + GKT++EA+K+ N
Sbjct: 31 GNAVCGDVTEFYIRVKDN-RLVEVKFKTYGCGAAVAISSLVSLMATGKTIEEAMKIDNKA 89
Query: 442 IAKEL-SLPPVKLHCSMLAEDAI 507
+ E+ LP + HCS + A+
Sbjct: 90 VEAEIKGLPQNRNHCSQMGPQAL 112
>UniRef50_Q3A8K8 Cluster: NifU-like protein; n=3;
Desulfuromonadales|Rep: NifU-like protein - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 143
Score = 72.5 bits (170), Expect = 8e-12
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 441
G P CGD + + + ++E+ I D K+K GC +AIA++S+ +E G+T+++A++L +
Sbjct: 29 GDPTCGDCLLVFLLIEED-VIRDMKYKVLGCAAAIATASITSEMAIGRTLEQAMELTEKE 87
Query: 442 IAKEL-SLPPVKLHCSMLAEDAIKQRYQI 525
+A L LPP K+HCS LA A+K ++
Sbjct: 88 VAVALGGLPPQKMHCSNLAVGALKAALRV 116
>UniRef50_Q74DA8 Cluster: NifU-like domain protein; n=2;
Desulfuromonadales|Rep: NifU-like domain protein -
Geobacter sulfurreducens
Length = 131
Score = 69.3 bits (162), Expect = 7e-11
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 441
G P CGD + + ++E+ + D KF GCG+AIA+SS+ATE V GK +DE + L +
Sbjct: 32 GDPTCGDAVLYFLRIEED-IVRDIKFLIKGCGAAIATSSVATELVMGKGLDEVMGLSDQI 90
Query: 442 IAKEL-SLPPVKLHCSMLAEDAI 507
IA+ L LP K+HCS +A A+
Sbjct: 91 IAQALDGLPEEKMHCSNMAASAL 113
Score = 33.1 bits (72), Expect = 6.0
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2
Query: 161 LAAPYHANVIDHYENPRNVGSLDKKDKNV 247
+A Y A V DH NPRNVGSL+ D NV
Sbjct: 1 MAEIYSAKVWDHVRNPRNVGSLE--DANV 27
>UniRef50_Q98AM0 Cluster: Nitrogen fixation protein; NifU; n=2;
Mesorhizobium loti|Rep: Nitrogen fixation protein; NifU
- Rhizobium loti (Mesorhizobium loti)
Length = 153
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGK-IVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
VGA ACGD +KL + D + I A F+TFG GSAI +SS T+++ GKT+DEAL++ +
Sbjct: 35 VGAVACGDGLKLMMGFDPKTETITAATFQTFGRGSAITASSTITQFIVGKTIDEALQITD 94
Query: 436 TDIAKEL-SLPPVKLHCSM 489
++A L +LPP ++ S+
Sbjct: 95 QEMADFLGALPPHTIYSSL 113
>UniRef50_A5D4Q3 Cluster: NifU homolog; n=1; Pelotomaculum
thermopropionicum SI|Rep: NifU homolog - Pelotomaculum
thermopropionicum SI
Length = 150
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 CGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 453
CGD M + + V +N KI +A F T GCG+ IA S+ TE K +V+EALK+K DI
Sbjct: 47 CGDTMAIWLKVIDN-KINNATFWTDGCGTTIACGSMVTEMAKNLSVEEALKIKAEDILNA 105
Query: 454 L-SLPPVKLHCSMLAEDAIK 510
L LP HC+ LA +A++
Sbjct: 106 LGGLPEDHAHCAALAAEALR 125
>UniRef50_Q023P2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Solibacter usitatus Ellin6076|Rep: Nitrogen-fixing NifU
domain protein - Solibacter usitatus (strain Ellin6076)
Length = 118
Score = 65.7 bits (153), Expect = 9e-10
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
V PACGD+++L E G+I +A +K GC ++IA+ S TEW+ GKT DE + T
Sbjct: 28 VSNPACGDILRLSALFTE-GRIAEASYKVRGCTASIAAGSALTEWLAGKTRDELSRFTAT 86
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAIK 510
I + + LP H ++L D +K
Sbjct: 87 LIDEAVGGLPTASKHAAVLCADGVK 111
>UniRef50_A0LFU2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 144
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 CGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 453
CGD M + + V ++G I D K++ GC A+AS+ A E +KGKT++EA L + DI +
Sbjct: 55 CGDTMSVCLKV-QDGVIRDLKYQVLGCPGAVASAMAAVELIKGKTIEEARSLNDGDIFRL 113
Query: 454 L-SLPPVKLHCSMLAEDAIKQ 513
L +P K HC LA +K+
Sbjct: 114 LEEIPAQKHHCIQLAVKTLKK 134
>UniRef50_A1AQD6 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: Nitrogen-fixing
NifU domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 133
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
+G P CGD +K+ + ++++ + D KF+ GC +AIA +S TE V GK V EA+ + +
Sbjct: 32 IGDPECGDHLKVYVKIEDD-IVKDIKFQIKGCPAAIACASAMTELVMGKPVGEAMLVSDD 90
Query: 439 DIAKEL-SLPPVKLHCSMLAEDAIK 510
I + + LP K+HCS L +
Sbjct: 91 QIIEYIDGLPEFKVHCSALGASGFR 115
>UniRef50_Q8TGK9 Cluster: Uncharacterized protein YPL135C-A; n=2;
Saccharomycetaceae|Rep: Uncharacterized protein
YPL135C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 57
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/38 (76%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Frame = -3
Query: 365 IAEPHPKVLNLASTIFPFSS-TXICNFITSPHAGAPTR 255
+AEPHPKVLNL S+I P S T ICN ITSPHAGAPTR
Sbjct: 1 MAEPHPKVLNLTSSITPVESLTLICNLITSPHAGAPTR 38
>UniRef50_Q8F7C7 Cluster: NifU-like protein; n=4; Leptospira|Rep:
NifU-like protein - Leptospira interrogans
Length = 263
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = +1
Query: 274 CGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 453
CGD ++ + +D + + DA + T GCG I + ++ATE+ KGKT+++ + +TDI
Sbjct: 36 CGDGYRIYLKIDSSETVTDASYTTTGCGFGIVALAMATEFAKGKTIEQLKSITSTDIEGM 95
Query: 454 LSLPPVKLHCSMLAEDAIKQRYQITES 534
P + + A A+ Q + ES
Sbjct: 96 FEFPERRKNYPESAVAALLQAVRDYES 122
>UniRef50_A7DRZ9 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: SUF system FeS assembly protein, NifU family -
Candidatus Nitrosopumilus maritimus SCM1
Length = 147
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
P CGD + + + +D++ K+ D KF GC +A SS+ TE KGK++++ ++ D+
Sbjct: 37 PLCGDSIDIDMKIDDD-KVTDIKFHGKGCAICMACSSVLTEITKGKSLEDVKNIEKNDVL 95
Query: 448 KELS---LPPVKLHCSMLAEDAIK 510
EL L V++ C++L+ +K
Sbjct: 96 SELGLEHLQAVRIKCALLSLKVLK 119
>UniRef50_Q1AWB1 Cluster: TRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase;
n=2; Bacteria|Rep: TRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
- Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129)
Length = 488
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 441
G ACGD ++ + V + ++ + +++ +GC + IA+ S E +G+++ A ++ D
Sbjct: 32 GNAACGDQVRFTLRVGGDLRLQEVRYRAYGCAACIAAGSALAELAEGRSITGAAQISRGD 91
Query: 442 IAKELS--LPPVKLHCSMLAEDAIKQRYQ 522
I + L LPP K H + LA DA+ + ++
Sbjct: 92 IQEALGGPLPPGKEHGATLALDALHRAFE 120
>UniRef50_Q1IN98 Cluster: Nitrogen-fixing NifU-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Nitrogen-fixing
NifU-like - Acidobacteria bacterium (strain Ellin345)
Length = 120
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
PACGD+++L + E G + + +F+ GC A+A S ++G++V + LK++ D+
Sbjct: 31 PACGDILELAAEIHE-GVVREIRFRAKGCVPAMACGSAIATLIQGQSVAQLLKIRREDVL 89
Query: 448 KEL-SLPPVKLHCSMLAEDAIKQRYQ 522
+E+ S+P H LA DA + ++
Sbjct: 90 REVESVPQASGHAVHLALDAASELWK 115
>UniRef50_Q97E24 Cluster: NifU homolog involved in Fe-S cluster
formation; n=8; Clostridia|Rep: NifU homolog involved in
Fe-S cluster formation - Clostridium acetobutylicum
Length = 143
Score = 53.2 bits (122), Expect = 5e-06
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 444
P+CGD + LQ+ + EN I DA F GC + AS+S+ + +KGKTV+EA KL T I
Sbjct: 36 PSCGDDITLQLKI-ENNVIEDAAFIGVGCAISQASTSIMIDLIKGKTVEEAKKLVETFI 93
>UniRef50_A7D1I7 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Halorubrum lacusprofundi ATCC 49239|Rep:
SUF system FeS assembly protein, NifU family -
Halorubrum lacusprofundi ATCC 49239
Length = 172
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/99 (29%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDA-KFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 444
P+CGD +++Q+ +D+ G+ + A +F GC ++AS+S+ +E + G +++E L DI
Sbjct: 69 PSCGDTIQMQVALDDAGETIKAVRFTGDGCAISMASASMLSERLHGMSIEELDALDTDDI 128
Query: 445 AKEL--SLPPVKLHCSML----AEDAIKQRYQITESDNR 543
+ L + P+++ C++L A+D K + D+R
Sbjct: 129 TEMLGVDISPMRVKCAVLGRQVAQDGSKIHRDELDPDDR 167
Score = 33.1 bits (72), Expect = 6.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 173 YHANVIDHYENPRNVGSLDKKD 238
Y ++DHY+NPRN G L+ D
Sbjct: 40 YRQQILDHYKNPRNYGELEDPD 61
>UniRef50_A0RXA5 Cluster: Fe-S cluster formation protein; n=1;
Cenarchaeum symbiosum|Rep: Fe-S cluster formation
protein - Cenarchaeum symbiosum
Length = 135
Score = 53.2 bits (122), Expect = 5e-06
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
P CGD + + + D I D F GC +A +S+ TE VKGK+V EA L+ D+
Sbjct: 27 PLCGDSIDMDLKFDGE-TISDVSFHGSGCAICMACTSVLTELVKGKSVSEARGLEKNDVL 85
Query: 448 KELS---LPPVKLHCSMLAEDAIK 510
EL L V++ C++L+ +K
Sbjct: 86 GELGLEHLQAVRIKCALLSLKVLK 109
>UniRef50_A5UR74 Cluster: SUF system FeS assembly protein, NifU
family; n=5; Chloroflexi (class)|Rep: SUF system FeS
assembly protein, NifU family - Roseiflexus sp. RS-1
Length = 132
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
P CGD +++ + + ENG I DA+F GC + AS+S+ TE + G V++A + +
Sbjct: 34 PLCGDRVRIDLRI-ENGIITDARFDGRGCAISQASASMLTEEIVGMPVEQAKQFSKDQML 92
Query: 448 KELSLP----PVKLHCSMLAEDAIK 510
+ +P PV++ C++L +K
Sbjct: 93 ALIGIPLNHNPVRIKCALLPLKTLK 117
>UniRef50_A1SV02 Cluster: SUF system FeS assembly protein, NifU
family protein; n=1; Psychromonas ingrahamii 37|Rep: SUF
system FeS assembly protein, NifU family protein -
Psychromonas ingrahamii (strain 37)
Length = 153
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 429
P CGD + L + +D+N +I+DA F+ GC ++A+SSL TE +K TV EA +L
Sbjct: 38 PLCGDRLTLYLRIDDN-RIIDASFEGEGCAISMAASSLMTERIKNMTVTEARQL 90
>UniRef50_Q7MYK4 Cluster: Similarities with nitrogen fixation
proteins; n=1; Photorhabdus luminescens subsp.
laumondii|Rep: Similarities with nitrogen fixation
proteins - Photorhabdus luminescens subsp. laumondii
Length = 118
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 VGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
+G P CGD + + + +D G++ +A F+ +GC +++A S+ KGKT++E L
Sbjct: 28 LGNPVCGDKVDIDLTLDNQGRVNNACFRAWGCTASLAMSNQFCRHAKGKTLEELNALSPE 87
Query: 439 DIAKEL-SLPPVKLHC 483
I L L P + HC
Sbjct: 88 GIDALLGELEPAQQHC 103
>UniRef50_Q83CI7 Cluster: NifU family protein; n=2; Coxiella
burnetii|Rep: NifU family protein - Coxiella burnetii
Length = 119
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +1
Query: 247 RYSLVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 426
RY + G + +L + +N I +AKF+ +G A A+ W +GKT DEA
Sbjct: 28 RYGEIATSTEGHLFRLYLRC-QNDIITEAKFQAYGSVVATAACEYVCRWAEGKTFDEANH 86
Query: 427 LKNTDIAKELSLPPVKLHCSMLAE 498
L + I K L+L +++H ++L E
Sbjct: 87 LDSDQIQKALNLSSLQVHAALLIE 110
>UniRef50_Q62LM3 Cluster: NifU-like domain protein; n=14;
Burkholderiales|Rep: NifU-like domain protein -
Burkholderia mallei (Pseudomonas mallei)
Length = 163
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 432
P CGD +K+Q+ + E G+I D +F GC IAS+S+ TE V G+ VD A L+
Sbjct: 47 PQCGDDLKVQLRI-EGGRIGDIRFDGHGCAICIASASMMTEAVIGRDVDAARALQ 100
>UniRef50_Q2JUE7 Cluster: SUF system FeS assembly protein, NifU
family; n=5; Synechococcus|Rep: SUF system FeS assembly
protein, NifU family - Synechococcus sp. (strain
JA-3-3Ab) (Cyanobacteria bacteriumYellowstone A-Prime)
Length = 162
Score = 49.6 bits (113), Expect = 6e-05
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENG-KIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 429
P+CGD + L + +D +I D KF+ GC A+AS+ L + V+G+T+ EAL+L
Sbjct: 39 PSCGDTIDLTLQLDPGQERIADIKFEGEGCAIALASADLMADAVRGRTIPEALQL 93
>UniRef50_Q3E456 Cluster: Nitrogen-fixing NifU-like, N-terminal;
n=2; Chloroflexus|Rep: Nitrogen-fixing NifU-like,
N-terminal - Chloroflexus aurantiacus J-10-fl
Length = 130
Score = 49.6 bits (113), Expect = 6e-05
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 441
G P CGD + + + V NG++ D +F GC ++ ++S+ E ++G TV + L L T
Sbjct: 36 GVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCSVSVGTASILIEQLQGATVADLLALDETA 95
Query: 442 IAKEL--SLPPVKLHCSMLAEDAIKQRYQITE 531
+ + + + HC+ L +K ++ E
Sbjct: 96 AVQIVGSEVFQARPHCATLIFRTLKAAARLVE 127
>UniRef50_Q1V2E5 Cluster: Putative nifU-like protein; n=2;
Candidatus Pelagibacter ubique|Rep: Putative nifU-like
protein - Candidatus Pelagibacter ubique HTCC1002
Length = 156
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
P CGD + + + +DEN K+ D F+ GC ++AS+S+ T+ +KGK E ++ N +
Sbjct: 36 PLCGDNVHIFLKLDENKKVEDISFEGSGCAISMASASIMTDLIKGKEEVEVKEIVNDFLG 95
Query: 448 KELSLPPVK 474
P +K
Sbjct: 96 MIKENPELK 104
>UniRef50_Q1JIL3 Cluster: IscU protein; n=11; Streptococcus
pyogenes|Rep: IscU protein - Streptococcus pyogenes
serotype M2 (strain MGAS10270)
Length = 159
Score = 49.2 bits (112), Expect = 9e-05
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
P CGDV+ L + DE+ KI D F GC + ASSS+ T+ V GK+ +EAL L DI
Sbjct: 38 PTCGDVISLTVKFDED-KIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALAL--ADIF 94
Query: 448 KEL 456
E+
Sbjct: 95 SEM 97
>UniRef50_A0LFS6 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 141
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 CGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 453
CGD +++ + V +GKI A F+T GC ++A ++ A G T +EA ++ I +
Sbjct: 42 CGDTVEMFLMV-RDGKIRTASFETNGCIYSVACANTAVHMASGLTPEEARRITPDQIVEF 100
Query: 454 L-SLPPVKLHCSMLAEDAIKQRYQITESDNRQ 546
L +LPP + HC+ A A++ RQ
Sbjct: 101 LETLPPEEEHCAEQAVKALRLALADARDGERQ 132
>UniRef50_Q74JG6 Cluster: NifU-like protein; n=2; Lactobacillus|Rep:
NifU-like protein - Lactobacillus johnsonii
Length = 152
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
P+CGD + L I + EN KI F GC + AS+S+ T+ VKGK++ EA++L +
Sbjct: 39 PSCGDKIHLTILI-ENNKIKKIAFNGEGCTISKASASMMTDLVKGKSIKEAIELSH 93
>UniRef50_O32163 Cluster: NifU-like protein; n=40; Bacilli|Rep:
NifU-like protein - Bacillus subtilis
Length = 147
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 429
P CGD ++L + +D G IV DAKF+ GC ++AS+S+ T+ +KGK ++ AL +
Sbjct: 39 PTCGDRIRLTMKLD--GDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSM 91
>UniRef50_Q88WY9 Cluster: NifU-like protein; n=53; Bacilli|Rep:
NifU-like protein - Lactobacillus plantarum
Length = 155
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
P CGDV+ L I +D + +I D F GC + AS+S+ T+ V GK+ ++AL + T
Sbjct: 39 PTCGDVINLAIQLDAHDQIEDIGFTGEGCTISQASASMMTDAVMGKSKEQALAMAKT 95
>UniRef50_Q2JCF1 Cluster: SUF system FeS assembly protein; n=37;
Actinomycetales|Rep: SUF system FeS assembly protein -
Frankia sp. (strain CcI3)
Length = 172
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
P CGD + L++ V + G + D +++ GC + AS+S+ ++ V GK+VD ALKL+ +A
Sbjct: 36 PTCGDEVTLRVKVSD-GVVEDVSYESEGCSISQASASVMSDLVIGKSVDAALKLEREFLA 94
>UniRef50_Q7UU01 Cluster: Nitrogen fixation protein NifU; n=1;
Pirellula sp.|Rep: Nitrogen fixation protein NifU -
Rhodopirellula baltica
Length = 144
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
P CGD + + + +D++GK+ +A F+ GC + AS+S+ E ++GKT++E +K +
Sbjct: 37 PLCGDRIVITLKLDDSGKVAEAWFEGEGCVISQASASMLIERMEGKTIEE-VKAFTAEEM 95
Query: 448 KEL---SLPPVKLHCSMLA 495
EL L P + C +L+
Sbjct: 96 LELFGPKLTPNRQKCCLLS 114
>UniRef50_Q5UY39 Cluster: NifU-like protein; n=5;
Halobacteriaceae|Rep: NifU-like protein - Haloarcula
marismortui (Halobacterium marismortui)
Length = 142
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVD-AKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 444
P CGD +++ + +DE+ + ++ F+ GC + AS+S+ ++ + G V++ + DI
Sbjct: 38 PMCGDEIRMDVVLDEDEETIEQVAFQGDGCAISQASASMLSQELAGMAVEDLKAMDRDDI 97
Query: 445 AKEL--SLPPVKLHCSMLAE 498
+ L + P+++ C++LAE
Sbjct: 98 TEMLGVDISPMRVKCAVLAE 117
>UniRef50_A5EYF1 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Dichelobacter nodosus VCS1703A|Rep: SUF
system FeS assembly protein, NifU family - Dichelobacter
nodosus (strain VCS1703A)
Length = 146
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 244 CRYSLVGA-PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 420
C +S G P CGD +K+ + ++E G I D F GC + AS+S+ TE GKT++E
Sbjct: 28 CTHSATGHNPLCGDNLKVFVRLNE-GVIADLSFVGDGCAISKASASMMTELAMGKTLEEF 86
Query: 421 LKL 429
KL
Sbjct: 87 QKL 89
>UniRef50_A4EB20 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 144
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 447
P+CGD + LQ+ V EN I +A F GC + AS+ + + + G+TV+EA +L +A
Sbjct: 35 PSCGDELTLQLRV-ENDVIEEASFTGHGCAISQASADIMADLITGETVEEARRLAGLFLA 93
>UniRef50_A0LNT2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 154
Score = 46.0 bits (104), Expect = 8e-04
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 CGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 453
CG+ M++ + + E+ +IVD F T GCG + A LA G+ +D+A ++ I
Sbjct: 53 CGETMEIHLEIQED-EIVDGSFVTDGCGPSKACGFLAVMLAIGRNLDDAAMIEGDTILDM 111
Query: 454 L-SLPPVKLHCSMLA 495
+ LP HC+ LA
Sbjct: 112 IEDLPEDHHHCAYLA 126
>UniRef50_A4BSU8 Cluster: Putative uncharacterized protein; n=1;
Nitrococcus mobilis Nb-231|Rep: Putative uncharacterized
protein - Nitrococcus mobilis Nb-231
Length = 123
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +1
Query: 319 KIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAE 498
+IVDA+++ FGC +AIA+++ + V G L IA+ L+LP K +++ E
Sbjct: 45 RIVDARYEVFGCPAAIAAAAWTAQRVVGAAPAAVASLHGRTIAELLALPVEKTGVALVVE 104
Query: 499 DAIK 510
DA++
Sbjct: 105 DAVR 108
>UniRef50_Q83BY1 Cluster: NifU family protein; n=14; Bacteria|Rep:
NifU family protein - Coxiella burnetii
Length = 158
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 420
P CGD + + ++NG I DA+F+ GC ++AS+SL E +KGK++ A
Sbjct: 47 PLCGDRLTV-FFQEKNGVITDARFEGSGCAISMASASLMMEALKGKSIQAA 96
>UniRef50_A4M9C6 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Petrotoga mobilis SJ95|Rep: SUF system FeS
assembly protein, NifU family - Petrotoga mobilis SJ95
Length = 145
Score = 42.7 bits (96), Expect = 0.007
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +1
Query: 271 ACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 429
+CGD + L + V++N I + F GC + AS+S+ E+++GKTVDEA K+
Sbjct: 41 SCGDEITLYLKVEDN-IIKEITFTGHGCIISQASASMMCEYLEGKTVDEANKI 92
>UniRef50_Q123X7 Cluster: SUF system FeS assembly protein; n=8;
Bacteria|Rep: SUF system FeS assembly protein -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 149
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 429
P CGD + L + V + G I +A+F+ GC + AS+SL T+ +KGKT E L
Sbjct: 37 PLCGDRLTLYLQVVD-GVIENARFEGSGCAISTASASLMTDALKGKTETEVENL 89
>UniRef50_Q6APN8 Cluster: Related to nitrogen fixation protein; n=1;
Desulfotalea psychrophila|Rep: Related to nitrogen
fixation protein - Desulfotalea psychrophila
Length = 136
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 CGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 453
CGD M++ + + ++ ++ ++ + GC + A +GKT++E K+ +
Sbjct: 44 CGDTMEMSLRIRDD-RVEKTRYSSDGCSISQQCIEAAAMLAQGKTIEEVRKINMMHVIDI 102
Query: 454 LS-LPPVKLHCSMLAEDAIK 510
+ LP LHC+ LAE ++
Sbjct: 103 VGDLPDSHLHCAQLAETTLQ 122
>UniRef50_Q0AAQ4 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Alkalilimnicola ehrlichei MLHE-1|Rep: SUF
system FeS assembly protein, NifU family -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 171
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 429
P CGD +++ + +DE G++ A F C ASSS+ TE V G E L
Sbjct: 60 PVCGDHIQVYLRLDEAGRVAAASFTGEACAICTASSSMMTEVVAGLDASEVAAL 113
>UniRef50_Q9X192 Cluster: NifU-like protein; n=3;
Thermotogaceae|Rep: NifU-like protein - Thermotoga
maritima
Length = 142
Score = 41.5 bits (93), Expect = 0.017
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +1
Query: 271 ACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 429
+CGD + L + V E+G + DAKF+ GC + AS+SL E + G+ V+E L
Sbjct: 37 SCGDEITLYLKV-EDGVVKDAKFEGMGCVISQASASLMLERIIGERVEEIFSL 88
>UniRef50_Q9KFV2 Cluster: Nitrogen fixation protein; n=2;
Bacillus|Rep: Nitrogen fixation protein - Bacillus
halodurans
Length = 149
Score = 41.1 bits (92), Expect = 0.023
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
P CGDV+ L + + + + D F GC ++AS+S+ TE +KG +++EA +++
Sbjct: 36 PTCGDVITLYVEL-QGHHVDDIAFVGEGCSISMASASMMTELLKGVSLEEASSMRH 90
>UniRef50_A6Q4J9 Cluster: Putative uncharacterized protein; n=1;
Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
protein - Nitratiruptor sp. (strain SB155-2)
Length = 159
Score = 40.3 bits (90), Expect = 0.039
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +1
Query: 277 GDVMKLQIXVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 453
G+++ + + +D I+ + K++T GCG+ + S +L +E KGKT+ ++ K
Sbjct: 40 GEMVVIYLKIDPISTIIKEIKWQTNGCGTTLVSGALFSEEYKGKTLQSGVEFTQDVFEKI 99
Query: 454 LSLPPVKLHCSMLAEDAIKQRYQITESDNR 543
PP C + A Q E+ R
Sbjct: 100 KDNPPEDAACGEVVARAFMAAVQDYEARKR 129
>UniRef50_A3LER3 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas aeruginosa 2192|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa 2192
Length = 197
Score = 40.3 bits (90), Expect = 0.039
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = -2
Query: 510 LNGVFCKHRAMKLDWW*GQLFSNICVLQF*CLINCFSFNPFSGKRAXXXXXXXXXXXXFG 331
L+GVF ++ A+ L GQLF + VL L+ + +P G+ A G
Sbjct: 82 LDGVFGENGAVDLHRRQGQLFGDGGVLDGFRLVQGLALHPLGGEGAGGDRGTATVGLELG 141
Query: 330 INDFSILVHXDLQLHYVSTCRCTNEA 253
+ D ++LV DLQ H+V+ R + A
Sbjct: 142 VFDHALLVDLDLQAHHVAAGRRADHA 167
>UniRef50_Q8G5Y3 Cluster: Putative uncharacterized protein; n=4;
Bifidobacterium|Rep: Putative uncharacterized protein -
Bifidobacterium longum
Length = 179
Score = 39.9 bits (89), Expect = 0.052
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 268 PACGDVMKLQIXV--DENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
P CGD + + V DE I + GC + AS S+ + V GKTVDEA+ L+ T
Sbjct: 62 PTCGDEATIHVEVSDDEPHTIKRLVWDGHGCSISQASLSVMVDLVDGKTVDEAMDLEQT 120
>UniRef50_Q8F0D6 Cluster: NifU homolog involved in Fe-S cluster
formation; n=4; Leptospira|Rep: NifU homolog involved in
Fe-S cluster formation - Leptospira interrogans
Length = 144
Score = 39.9 bits (89), Expect = 0.052
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 420
P CGD ++L I +D N +I + + GC + AS S+ E + GKT+ EA
Sbjct: 37 PLCGDELELTINLDGN-RITEIRVTGKGCSISQASGSMMAESIYGKTIAEA 86
>UniRef50_A1ZYV1 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Microscilla marina ATCC 23134|Rep: SUF
system FeS assembly protein, NifU family - Microscilla
marina ATCC 23134
Length = 142
Score = 39.5 bits (88), Expect = 0.069
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
P CGD +L I + E I A F +GC + AS+S+ + ++GKT+ EA L T
Sbjct: 38 PLCGDHFQLYISL-EGAVIQQAFFHGYGCAVSKASTSVLLQTIEGKTLTEAKTLIET 93
>UniRef50_Q3A7R9 Cluster: NifU-like protein; n=2;
Desulfuromonadales|Rep: NifU-like protein - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 335
Score = 39.1 bits (87), Expect = 0.091
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 IVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAE 498
I D ++ FGCG ++A+ + A E K + A+ + + + L LPP + +C+ LA
Sbjct: 54 ITDVGYQVFGCGYSMAACAAAAELACNKNLPSAMAIDASQVDALLDGLPPERSYCADLAV 113
Query: 499 DAIK 510
+A++
Sbjct: 114 EALQ 117
>UniRef50_Q1WR14 Cluster: IscU protein; n=1; Lactobacillus
salivarius subsp. salivarius UCC118|Rep: IscU protein -
Lactobacillus salivarius subsp. salivarius (strain
UCC118)
Length = 149
Score = 39.1 bits (87), Expect = 0.091
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVD--EALKLKNTD 441
P CGDV+ L +++N KI D F +GC + +S+S+ T V K D + + L +D
Sbjct: 37 PTCGDVITLTALIEDN-KIKDIAFDGYGCTISQSSASIMTNEVLNKDFDTIKNMVLSFSD 95
Query: 442 IAKELSLPPVKLHCSMLAEDAIKQ 513
+ + P K+ + + +KQ
Sbjct: 96 MITKEVKPDRKVLGEAIILEGVKQ 119
>UniRef50_Q6MEW2 Cluster: Putative iron-sulfur cluster assembly
protein nifU; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative iron-sulfur cluster assembly protein
nifU - Protochlamydia amoebophila (strain UWE25)
Length = 263
Score = 38.3 bits (85), Expect = 0.16
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 438
G A G+ + L VD ++G IVDAKF+ +G + I ++ +A E V GK D+A ++
Sbjct: 50 GKLADGNSVILYWLVDPDDGIIVDAKFQAYGQSALIGAAEVACELVIGKNYDQAKRISVD 109
Query: 439 DIAKELSLPP 468
+ K++ P
Sbjct: 110 LLDKQVRDKP 119
>UniRef50_Q2LWF0 Cluster: NifU-like protein involved in Fe-S cluster
formation; n=3; Syntrophus aciditrophicus SB|Rep:
NifU-like protein involved in Fe-S cluster formation -
Syntrophus aciditrophicus (strain SB)
Length = 238
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 271 ACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAK 450
+CGD M++ + + ++ D T GC + +GKTV E + I +
Sbjct: 47 SCGDTMEIALKFN-GPRVEDVHCWTDGCAISKMCVETVGMLARGKTVPELRTIDTASILE 105
Query: 451 ELS-LPPVKLHCSMLAEDAIKQ 513
+ LP +HC++LAE +++
Sbjct: 106 RVGQLPETHMHCAVLAETTLQK 127
>UniRef50_O83624 Cluster: Nitrogen fixation protein; n=2;
Treponema|Rep: Nitrogen fixation protein - Treponema
pallidum
Length = 147
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 426
P+CGD + L I E +I D F GC + AS+++ E +KG +V +A K
Sbjct: 36 PSCGDDLTLLIK-REGDRIADVAFLGTGCAVSTASTNILIELIKGASVAQAQK 87
>UniRef50_Q14L11 Cluster: Putative iron-sulfur cluster assembly
protein; n=1; Spiroplasma citri|Rep: Putative
iron-sulfur cluster assembly protein - Spiroplasma citri
Length = 150
Score = 37.9 bits (84), Expect = 0.21
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 271 ACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAK 450
+C D + L++ ++ N KI+ A+F GC + ASS + + ++GK + + L + +A
Sbjct: 42 SCIDDIYLELMIERN-KIISARFDGVGCAISTASSDIMAQELEGKAIKDGLAIIENYLAM 100
Query: 451 ELSLP 465
P
Sbjct: 101 VFDQP 105
>UniRef50_Q98R36 Cluster: NITROGEN FIXATION PROTEIN NIFU; n=1;
Mycoplasma pulmonis|Rep: NITROGEN FIXATION PROTEIN NIFU
- Mycoplasma pulmonis
Length = 144
Score = 37.5 bits (83), Expect = 0.28
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 271 ACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL----KNT 438
+C D + +++ +D+N + + F GC I+S+ L E +K K +DE L + KN
Sbjct: 39 SCADSISIKLEIDKN-IVKNISFNGSGCAIFISSTDLLLEQIKNKNIDEVLDIIENYKNM 97
Query: 439 DIAKE 453
AKE
Sbjct: 98 INAKE 102
>UniRef50_A6Q975 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 152
Score = 37.1 bits (82), Expect = 0.37
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 307 DENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCS 486
+E I D KF+ GC + + + S+ TE KG ++ A L + + LP CS
Sbjct: 48 EEEPYIGDIKFQAIGCTTTVVAGSMLTEEAKGLNLNGAYNLVDATMKLLEKLPAEDAACS 107
Query: 487 MLAEDAIK 510
+ AIK
Sbjct: 108 EMVALAIK 115
>UniRef50_A5UR82 Cluster: Nitrogen-fixing NifU domain protein; n=4;
Bacteria|Rep: Nitrogen-fixing NifU domain protein -
Roseiflexus sp. RS-1
Length = 129
Score = 37.1 bits (82), Expect = 0.37
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKT 408
G P CGDV+ + + V+ +I F+ GC + A++S+ TE G T
Sbjct: 33 GHPECGDVITIYLKVEPPDRITAVSFEGRGCTISQAAASILTELAAGAT 81
>UniRef50_Q1AZN5 Cluster: SUF system FeS assembly protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: SUF system FeS
assembly protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 140
Score = 36.7 bits (81), Expect = 0.49
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 420
P CGD + + E ++ +A F GC + AS+S+ TE ++GK+ +EA
Sbjct: 35 PLCGDEVTVYARF-EGDRVAEASFTGRGCSISQASASMMTERLRGKSREEA 84
>UniRef50_A1IF14 Cluster: NifU protein; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: NifU protein -
Candidatus Desulfococcus oleovorans Hxd3
Length = 105
Score = 36.7 bits (81), Expect = 0.49
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 274 CGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 453
CGD +++ I + I F GC + AS++ +GK ++ A ++ +
Sbjct: 14 CGDTVEMFIKKGTDSIIEQVLFDIRGCRNTHASANAVAVLAEGKKIEAAWEITPEAVIDL 73
Query: 454 L-SLPPVKLHCSMLAEDA 504
L +LPP HC+ LA A
Sbjct: 74 LETLPPDHFHCAELAVGA 91
>UniRef50_Q97G09 Cluster: NifU-related domain containing protein;
n=67; Bacteria|Rep: NifU-related domain containing
protein - Clostridium acetobutylicum
Length = 230
Score = 36.3 bits (80), Expect = 0.64
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +1
Query: 265 APACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 444
AP G KL + V E G I +A +T GC S+++A+E + GKT+ EAL NTD+
Sbjct: 50 APQQG-ACKLTLNVKE-GVIEEALVETIGCSGMTHSAAMASEILPGKTILEAL---NTDL 104
>UniRef50_Q8EV25 Cluster: Nitrogen fixation protein NifU; n=1;
Mycoplasma penetrans|Rep: Nitrogen fixation protein NifU
- Mycoplasma penetrans
Length = 148
Score = 36.3 bits (80), Expect = 0.64
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 271 ACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDE 417
+C D + L + +ENG IVD KF GC + AS+ + +K K V++
Sbjct: 47 SCIDNLTLYLK-EENGIIVDVKFSGIGCAISTASTDIFCTMIKNKKVND 94
>UniRef50_Q82UN6 Cluster: NifU-like N terminal domain; n=5;
Bacteria|Rep: NifU-like N terminal domain - Nitrosomonas
europaea
Length = 159
Score = 36.3 bits (80), Expect = 0.64
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 420
P CGD ++L I + + G I + F+ C ASSS+ T VKGK+ EA
Sbjct: 36 PLCGDRIELDINMLD-GHIEEIAFQGESCAICKASSSMMTNAVKGKSHQEA 85
>UniRef50_Q6KIL2 Cluster: Aminotransferase protein U homolog; n=1;
Mycoplasma mobile|Rep: Aminotransferase protein U
homolog - Mycoplasma mobile
Length = 142
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 271 ACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
+C D + L + + EN +VDAKF+ GC ++S+ + E +K K + + ++ N
Sbjct: 39 SCVDEINLNLKI-ENDFLVDAKFQGVGCAVFLSSADIFLEEIKNKPLSKVNEIAN 92
>UniRef50_Q5K806 Cluster: Trehalose transport-related protein,
putative; n=1; Filobasidiella neoformans|Rep: Trehalose
transport-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 546
Score = 36.3 bits (80), Expect = 0.64
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = -3
Query: 443 ISVFFNFSASSTVFPLTHSVARELEAIAEPHPKVLNLASTIFPFSSTXICNFIT 282
+ V NFS ++T FP+T+++A E+ A K + L ++ SS ICN IT
Sbjct: 409 VMVIINFSTNATFFPVTYTIAAEVPA-TRVRAKTMVLGRGVYLISS-IICNQIT 460
>UniRef50_Q8FF43 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli O6|Rep: Putative uncharacterized
protein - Escherichia coli O6
Length = 160
Score = 35.9 bits (79), Expect = 0.85
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = -2
Query: 501 VFCKHRAMKLDWW*GQLFSNICVLQF*CLINCFSFNPFSGKRAXXXXXXXXXXXXFGIND 322
VFC++R + + FSNI V + F+PF + A + +
Sbjct: 45 VFCQNRTVNFHRRQFKFFSNIGVFDSLRFVERLPFHPFGDQGAGSDSRTAAVSFKTRVFN 104
Query: 321 FSILVHXDLQLHYVSTCRCTNEAVPTFL 238
+ +V +LQLH+V+T R T+ A L
Sbjct: 105 DTFIVDFNLQLHHVATGRRTHHAAADVL 132
>UniRef50_Q821N4 Cluster: NifU protein, putative; n=6;
Chlamydophila|Rep: NifU protein, putative -
Chlamydophila caviae
Length = 273
Score = 35.9 bits (79), Expect = 0.85
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +1
Query: 313 NGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVK 474
NGKI+DAKF+ FG + + + V GKT +A L I EL P K
Sbjct: 67 NGKIIDAKFQYFGHPFLLVLAEVTCNLVIGKTYAQAYNLTVNTIDTELRSHPNK 120
>UniRef50_Q73LQ8 Cluster: Putative uncharacterized protein; n=1;
Treponema denticola|Rep: Putative uncharacterized
protein - Treponema denticola
Length = 848
Score = 35.9 bits (79), Expect = 0.85
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 406 TVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKQRYQITE 531
T ++A+K N D A++LS P KLHCS D+ +QR + E
Sbjct: 757 TDEKAIKKANEDFARKLSYAPEKLHCSSF--DSFQQRENLFE 796
>UniRef50_UPI00001D2CFF Cluster: UPI00001D2CFF related cluster; n=1;
unknown|Rep: UPI00001D2CFF UniRef100 entry - unknown
Length = 51
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1
Query: 454 LSLPPVKLHCSMLAEDAIK 510
LSLPPVK+HCS+ AEDA++
Sbjct: 15 LSLPPVKIHCSVPAEDAMR 33
>UniRef50_Q9PQ37 Cluster: Conserved hypothetical; n=1; Ureaplasma
parvum|Rep: Conserved hypothetical - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 155
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 274 CGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
CGD + + + ++ KI+D F GC +I+S+ + E VK ++ AL L N
Sbjct: 46 CGDDITVYVKLNHQ-KIIDVVFLGTGCAISISSTDIICELVKNLDLNNALLLIN 98
>UniRef50_A5IXL2 Cluster: Nitrogen fixation protein NifU; n=1;
Mycoplasma agalactiae|Rep: Nitrogen fixation protein
NifU - Mycoplasma agalactiae
Length = 130
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +1
Query: 271 ACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEAL 423
+CGD ++ + EN + D F GC I+S++L +++ T+DE+L
Sbjct: 24 SCGDYLEADYII-ENKILKDLHFNGNGCAYFISSANLLCKYLNSTTIDESL 73
>UniRef50_Q4ZVI2 Cluster: Amino acid adenylation; n=4;
Pseudomonas|Rep: Amino acid adenylation - Pseudomonas
syringae pv. syringae (strain B728a)
Length = 1370
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +1
Query: 283 VMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSL 462
+M LQ ++ +G GSA A LA EWV+ V L NTD+ + S+
Sbjct: 418 MMVLQNTPGNAARMPGLSMTPYGTGSATAKFDLAFEWVERDGVLSLLVEYNTDLFDQTSI 477
Query: 463 PPVKLHCSMLAE 498
+ H L E
Sbjct: 478 ERLSGHYRQLLE 489
>UniRef50_Q2JM75 Cluster: WD-repeat/protein kinase domain protein;
n=2; Synechococcus|Rep: WD-repeat/protein kinase domain
protein - Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 759
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 388 EWVKGKTVDEALKLKNTDIAKELSLPPVKLHC 483
EWV+G T+++AL L N +L+ P ++HC
Sbjct: 109 EWVEGPTLEQALLLGNATERGQLTTPSRQMHC 140
>UniRef50_Q0FGM6 Cluster: NifU-related protein involved in Fe-S
cluster formation; n=2; Alphaproteobacteria|Rep:
NifU-related protein involved in Fe-S cluster formation
- alpha proteobacterium HTCC2255
Length = 147
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 265 APACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDE 417
+P CG +++ I V+E GKI D C ASSS+ E + G +D+
Sbjct: 39 SPMCGSNLQVWINVNE-GKITDFSHDVKTCALGQASSSIIAEKIIGLGIDQ 88
>UniRef50_A7BC55 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 158
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 268 PACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 429
P CGD + L + +D ++ ++ GC + AS S+ T+ +GK+ +E +L
Sbjct: 37 PTCGDEVTLGVTLDGE-RLASLQWDGDGCSISRASLSMMTDLTQGKSAEEIGRL 89
>UniRef50_Q01180 Cluster: Nitrogen fixation protein nifU; n=4;
Rhodobacter sphaeroides|Rep: Nitrogen fixation protein
nifU - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 246
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 262 GAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKG 402
G+ GD ++L + + E G++ +A+F FG AIA S T V G
Sbjct: 31 GSLEVGDAIRLMLRI-EAGRVAEARFLAFGGAHAIACGSALTVLVTG 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,792,941
Number of Sequences: 1657284
Number of extensions: 11320165
Number of successful extensions: 25983
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 25191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25942
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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