Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1654
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47101-1|AAC50885.1|  121|Homo sapiens NifU-like protein protein.     164   2e-40
BC061903-1|AAH61903.1|  167|Homo sapiens iron-sulfur cluster sca...   164   2e-40
BC011906-1|AAH11906.1|  167|Homo sapiens iron-sulfur cluster sca...   164   2e-40
AY009128-1|AAG37428.1|  167|Homo sapiens ISCU2 protein.               164   2e-40
AY009127-1|AAG37427.1|  142|Homo sapiens ISCU1 protein.               164   2e-40

>U47101-1|AAC50885.1|  121|Homo sapiens NifU-like protein protein.
          Length = 121

 Score =  164 bits (399), Expect = 2e-40
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +1

Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
           LVGAPACGDVMKLQI VDE GKIVDA+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KN
Sbjct: 17  LVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKN 76

Query: 436 TDIAKELSLPPVKLHCSMLAEDAIK 510
           TDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 77  TDIAKELCLPPVKLHCSMLAEDAIK 101



 Score = 30.3 bits (65), Expect = 6.3
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +2

Query: 209 RNVGSLDKKDKNVGT 253
           RNVGSLDK  KNVGT
Sbjct: 1   RNVGSLDKTSKNVGT 15


>BC061903-1|AAH61903.1|  167|Homo sapiens iron-sulfur cluster
           scaffold homolog (E. coli) protein.
          Length = 167

 Score =  164 bits (399), Expect = 2e-40
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +1

Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
           LVGAPACGDVMKLQI VDE GKIVDA+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KN
Sbjct: 63  LVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKN 122

Query: 436 TDIAKELSLPPVKLHCSMLAEDAIK 510
           TDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 123 TDIAKELCLPPVKLHCSMLAEDAIK 147



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
 Frame = +2

Query: 95  AFLINGIRRCMCLKGFGSPNVILAAP---YHANVIDHYENPRNVGSLDKKDKNVGT 253
           AF +      + L+    P   L+AP   YH  V+DHYENPRNVGSLDK  KNVGT
Sbjct: 6   AFRLRRAASALLLRSPRLPARELSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGT 61


>BC011906-1|AAH11906.1|  167|Homo sapiens iron-sulfur cluster
           scaffold homolog (E. coli) protein.
          Length = 167

 Score =  164 bits (399), Expect = 2e-40
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +1

Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
           LVGAPACGDVMKLQI VDE GKIVDA+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KN
Sbjct: 63  LVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKN 122

Query: 436 TDIAKELSLPPVKLHCSMLAEDAIK 510
           TDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 123 TDIAKELCLPPVKLHCSMLAEDAIK 147



 Score = 54.8 bits (126), Expect = 3e-07
 Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 3/34 (8%)
 Frame = +2

Query: 161 LAAP---YHANVIDHYENPRNVGSLDKKDKNVGT 253
           L+AP   YH  V+DHYENPRNVGSLDK  KNVGT
Sbjct: 28  LSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGT 61


>AY009128-1|AAG37428.1|  167|Homo sapiens ISCU2 protein.
          Length = 167

 Score =  164 bits (399), Expect = 2e-40
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +1

Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
           LVGAPACGDVMKLQI VDE GKIVDA+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KN
Sbjct: 63  LVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKN 122

Query: 436 TDIAKELSLPPVKLHCSMLAEDAIK 510
           TDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 123 TDIAKELCLPPVKLHCSMLAEDAIK 147



 Score = 54.8 bits (126), Expect = 3e-07
 Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 3/34 (8%)
 Frame = +2

Query: 161 LAAP---YHANVIDHYENPRNVGSLDKKDKNVGT 253
           L+AP   YH  V+DHYENPRNVGSLDK  KNVGT
Sbjct: 28  LSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGT 61


>AY009127-1|AAG37427.1|  142|Homo sapiens ISCU1 protein.
          Length = 142

 Score =  164 bits (399), Expect = 2e-40
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +1

Query: 256 LVGAPACGDVMKLQIXVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 435
           LVGAPACGDVMKLQI VDE GKIVDA+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KN
Sbjct: 38  LVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKN 97

Query: 436 TDIAKELSLPPVKLHCSMLAEDAIK 510
           TDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 98  TDIAKELCLPPVKLHCSMLAEDAIK 122



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +2

Query: 185 VIDHYENPRNVGSLDKKDKNVGT 253
           V+DHYENPRNVGSLDK  KNVGT
Sbjct: 14  VVDHYENPRNVGSLDKTSKNVGT 36


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,951,886
Number of Sequences: 237096
Number of extensions: 1683262
Number of successful extensions: 2769
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2769
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)