Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1653
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.73 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = -3

Query: 538 ECGLVPCK----MDETQIQCIYYCKCHLGFL 458
           EC   PC     +D  Q+   Y+C C LGF+
Sbjct: 301 ECLSNPCSNAGTLDCVQLVNDYHCNCKLGFM 331


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/26 (23%), Positives = 16/26 (61%)
 Frame = +3

Query: 51  KEANIYLDNQWNTYYAGQTVNGRIEY 128
           K  ++Y  +QW  + + + ++ ++EY
Sbjct: 320 KNTHMYKGDQWVAFDSPKAISNKVEY 345


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 403 MFPFKR*RQDRWQ 365
           +FPF R  Q RWQ
Sbjct: 173 LFPFYRQNQQRWQ 185


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 426 LTVYLT*PCSPSKDEGRTGGNVQVK 352
           LT Y T   SPS  E   GG   V+
Sbjct: 1   LTPYFTQSTSPSASEAFPGGRTLVE 25


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -3

Query: 211  CLLSYNSV*ASPLILTCMPRTFFGLSKTYSILPFTVCP 98
            C+L  ++    P   T  P T  G      +LP  V P
Sbjct: 2199 CILGRDNDKTKPKPTTMKPTTTIGYEPQEPVLPAEVVP 2236


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 529 LVPCKMDETQIQCI 488
           +V C  DET I+C+
Sbjct: 245 IVGCGTDETMIKCL 258


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 529 LVPCKMDETQIQCI 488
           +V C  DET I+C+
Sbjct: 245 IVGCGTDETMIRCL 258


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 529 LVPCKMDETQIQCI 488
           +V C  DET I+C+
Sbjct: 245 IVGCGTDETMIKCL 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,178
Number of Sequences: 336
Number of extensions: 4100
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)