Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1651
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            27   0.81 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   2.5  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   4.3  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    24   5.7  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 17/85 (20%), Positives = 39/85 (45%)
 Frame = -3

Query: 327 PRRTRAASRKFSCALS*TDAVSRSLLYGLEPRWSLVAHNLTEDCSVVSQCRVDGRQAQVT 148
           P   +    +++ A + +D     +LYGL+    +  +N  E   ++ +C  D  Q +++
Sbjct: 112 PNCEKGCKTEYTIAQTSSDGQQTDVLYGLQQLHVMERNNWKETHQLIQECEQDHVQ-RLS 170

Query: 147 TSLEFVERIRKAVMNAWNLLNAVSK 73
                 +RI+   +   +L++A  K
Sbjct: 171 NQRSHYKRIQCYSLKQRSLVDAFQK 195


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 155 CACLPSTRH*ETTEQSSVRLWATRDQR 235
           CACLP   H  T E  +V  WA  D R
Sbjct: 677 CACLPPATHELTPE--AVHQWAQYDLR 701


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -3

Query: 456 RRWNRDTAGVPPPRDLETVCL 394
           RR  R TAGVPP R  E V L
Sbjct: 676 RRSQRATAGVPPARYDEEVYL 696


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 156 ALVSHLPDTERQRSSLRSG 212
           ++++H PDT+R R  L SG
Sbjct: 135 SVIAHNPDTKRTRVKLPSG 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,709
Number of Sequences: 2352
Number of extensions: 14781
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)