Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1650
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   1.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.3  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 580 KFWFENGLTDSKKQQHDK 633
           K WF+N    +K+ QH+K
Sbjct: 85  KIWFQNHRYKTKRAQHEK 102


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 447 FIKRLVEFETNYIRSIFLIILFVSYSAC 530
           FIK+L + + N  +S + I +FVS   C
Sbjct: 280 FIKKLGKIKENLEQSRYFIYMFVSVWKC 307


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 447 FIKRLVEFETNYIRSIFLIILFVSYSAC 530
           FIK+L + + N  +S + I +FVS   C
Sbjct: 280 FIKKLGKIKENLEQSRYFIYMFVSVWKC 307


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 447 FIKRLVEFETNYIRSIFLIILFVSYSAC 530
           FIK+L + + N  +S + I +FVS   C
Sbjct: 280 FIKKLGKIKENLEQSRYFIYMFVSVWKC 307


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 447 FIKRLVEFETNYIRSIFLIILFVSYSAC 530
           FIK+L + + N  +S + I +FVS   C
Sbjct: 280 FIKKLGKIKENLEQSRYFIYMFVSVWKC 307


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 580 KFWFENGLTDSKKQQHDK 633
           K WF+N     KK+Q +K
Sbjct: 133 KIWFQNRRMKHKKEQMNK 150


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 143 NISGFIYQFLFIRSRTFAA 199
           N+S  + QFLF +  TF A
Sbjct: 459 NLSEMVKQFLFTQKFTFVA 477


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 580 KFWFENGLTDSKKQQHDK 633
           K WF+N     KK+Q +K
Sbjct: 124 KIWFQNRRMKHKKEQMNK 141


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 488 INIFNYLIRELFRLFLKNSLIFLGF 562
           + +F Y I   F  ++ N+ IFL F
Sbjct: 141 VRMFQYYIGRSFTYYVCNTTIFLIF 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,865
Number of Sequences: 336
Number of extensions: 2697
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)