Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1649
(717 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0IFJ1 Cluster: ATP-dependent RNA helicase; n=2; Coelom... 144 3e-33
UniRef50_P24785 Cluster: Dosage compensation regulator; n=6; End... 120 4e-26
UniRef50_Q08211 Cluster: ATP-dependent RNA helicase A; n=42; cel... 103 6e-21
UniRef50_Q4T4A4 Cluster: Chromosome undetermined SCAF9761, whole... 95 2e-18
UniRef50_Q22307 Cluster: Probable ATP-dependent RNA helicase A; ... 76 8e-13
UniRef50_Q4QI28 Cluster: RNA helicase, putative; n=7; Trypanosom... 55 2e-06
UniRef50_Q016V0 Cluster: ATP-dependent RNA helicase A; n=1; Ostr... 50 4e-05
UniRef50_Q84VZ2 Cluster: At1g58060; n=8; core eudicotyledons|Rep... 47 4e-04
UniRef50_Q01C44 Cluster: MRNA splicing factor ATP-dependent RNA ... 46 0.001
UniRef50_Q01DF3 Cluster: MRNA splicing factor ATP-dependent RNA ... 43 0.009
UniRef50_Q00YU4 Cluster: MRNA splicing factor ATP-dependent RNA ... 43 0.009
UniRef50_Q7XQP1 Cluster: OSJNBa0084A10.14 protein; n=4; Oryza sa... 42 0.015
UniRef50_Q4SQ99 Cluster: Chromosome 4 SCAF14533, whole genome sh... 42 0.020
UniRef50_Q7Z478 Cluster: Putative ATP-dependent RNA helicase DHX... 42 0.020
UniRef50_A5C7X9 Cluster: Putative uncharacterized protein; n=1; ... 41 0.027
UniRef50_Q10CV6 Cluster: Helicase associated domain family prote... 40 0.046
UniRef50_A2Z8G0 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_UPI0000DB745A Cluster: PREDICTED: similar to CG1582-PA;... 38 0.19
UniRef50_UPI0000D55D80 Cluster: PREDICTED: similar to CG1582-PA;... 38 0.19
UniRef50_UPI00015B51BF Cluster: PREDICTED: hypothetical protein;... 37 0.43
UniRef50_UPI00015B4181 Cluster: PREDICTED: similar to ATP-depend... 37 0.43
UniRef50_Q177H6 Cluster: Dynactin; n=4; Culicidae|Rep: Dynactin ... 36 0.76
UniRef50_Q6P158 Cluster: Putative ATP-dependent RNA helicase DHX... 36 0.76
UniRef50_UPI0000DA22D1 Cluster: PREDICTED: hypothetical protein;... 36 1.3
UniRef50_UPI000069E541 Cluster: Probable ATP-dependent RNA helic... 35 1.7
UniRef50_Q4RXR5 Cluster: Chromosome 11 SCAF14979, whole genome s... 34 3.0
UniRef50_Q0RIR9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q8SWT2 Cluster: GH12763p; n=2; Sophophora|Rep: GH12763p... 34 3.0
UniRef50_Q1GW96 Cluster: Adenylate/guanylate cyclase precursor; ... 33 5.3
UniRef50_Q7G4G7 Cluster: Transferase family protein, expressed; ... 33 5.3
UniRef50_A7SKC8 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.3
UniRef50_Q4TBH9 Cluster: Chromosome 13 SCAF7124, whole genome sh... 33 7.0
UniRef50_Q58KH0 Cluster: ORF320; n=2; Leptospirillum ferrooxidan... 33 7.0
UniRef50_Q2R239 Cluster: Putative uncharacterized protein; n=2; ... 33 7.0
UniRef50_Q5DD69 Cluster: SJCHGC06326 protein; n=1; Schistosoma j... 33 7.0
UniRef50_UPI0000E23647 Cluster: PREDICTED: similar to putative t... 33 9.3
UniRef50_Q3M5E6 Cluster: Multicopper oxidase, types 2 and 3 prec... 33 9.3
UniRef50_A1GGF0 Cluster: Coagulation factor 5/8 type-like; n=2; ... 33 9.3
UniRef50_Q9H2U1 Cluster: Probable ATP-dependent RNA helicase DHX... 33 9.3
>UniRef50_Q0IFJ1 Cluster: ATP-dependent RNA helicase; n=2;
Coelomata|Rep: ATP-dependent RNA helicase - Aedes aegypti
(Yellowfever mosquito)
Length = 1131
Score = 144 bits (348), Expect = 3e-33
Identities = 62/85 (72%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Frame = +3
Query: 243 HREE-KVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHL 419
H+E+ KVLTTE K ALIHKTSVNCSN++ FP P+FVFGEK+RTRA+SCKQ +MV+PIH+
Sbjct: 896 HKEKRKVLTTESKAALIHKTSVNCSNLQVTFPYPMFVFGEKIRTRAVSCKQMSMVSPIHI 955
Query: 420 LLFGCNKVEWVDNVVRLDNWLNFQM 494
LLFG KVEWVDN+VR+DNW+NF+M
Sbjct: 956 LLFGSKKVEWVDNMVRIDNWMNFEM 980
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 127 GFNEECCVPQRWMPNGPDPTLDLVIALMCMGLYPNVCLH 243
GF EE V + N DP LD+ ++L+C+GLYPNVC+H
Sbjct: 858 GFPEETMVEMGFDQNDDDPRLDMALSLLCVGLYPNVCVH 896
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = -3
Query: 127 LRWCEWKGVQQTTLRVTYEAKHQLINILTTAIGFNEE 17
+++CEWKG+Q +TLRV EAK QL+ +L+ A GF EE
Sbjct: 827 IQFCEWKGLQLSTLRVMSEAKRQLLELLSQA-GFPEE 862
>UniRef50_P24785 Cluster: Dosage compensation regulator; n=6;
Endopterygota|Rep: Dosage compensation regulator -
Drosophila melanogaster (Fruit fly)
Length = 1293
Score = 120 bits (289), Expect = 4e-26
Identities = 53/89 (59%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
Frame = +3
Query: 234 LSTHREE-KVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAP 410
+ H+E+ KVLTTE K AL+HKTSVNCSN+ FP P FVFGEK+RTRA+SCKQ +MV+P
Sbjct: 1012 ICVHKEKRKVLTTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVSP 1071
Query: 411 IHLLLFGCNKVEW-VDNVVRLDNWLNFQM 494
+ ++LFG K++ +N+VR+DNWLNF +
Sbjct: 1072 LQVILFGSRKIDLAANNIVRVDNWLNFDI 1100
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +1
Query: 127 GFNEECCVPQRWMP--NGPDPTLDLVIALMCMGLYPNVCLH 243
GF EEC + +G DP LD+ +AL+C+GLYPN+C+H
Sbjct: 975 GFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNICVH 1015
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = -3
Query: 124 RWCEWKGVQQTTLRVTYEAKHQLINILTTAIGFNEE 17
R+C+WKG+Q +T+ V ++AK QL+++L A GF EE
Sbjct: 945 RFCDWKGLQMSTMNVIWDAKQQLLDLLQQA-GFPEE 979
>UniRef50_Q08211 Cluster: ATP-dependent RNA helicase A; n=42; cellular
organisms|Rep: ATP-dependent RNA helicase A - Homo
sapiens (Human)
Length = 1270
Score = 103 bits (246), Expect = 6e-21
Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Frame = +3
Query: 147 CSTTLDAERTGP--NFGLGHSPHVHGPVP*RLSTHREE-KVLTTEGKPALIHKTSVNC-- 311
C T TGP N + S G P + H+E+ K+LTTEG+ ALIHK+SVNC
Sbjct: 973 CLLTQVFTNTGPDNNLDVVISLLAFGVYP-NVCYHKEKRKILTTEGRNALIHKSSVNCPF 1031
Query: 312 SNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCNKVEWVDNVVRLDNWLNFQ 491
S+ + K+PSP FVFGEK+RTRAIS K T+V P+ LLLF KV+ +V +D+W+ Q
Sbjct: 1032 SSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGQIVLVDDWIKLQ 1091
Query: 492 M 494
+
Sbjct: 1092 I 1092
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +1
Query: 127 GFNEECCVPQRWMPNGPDPTLDLVIALMCMGLYPNVCLH 243
GF E+C + Q + GPD LD+VI+L+ G+YPNVC H
Sbjct: 968 GFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYH 1006
Score = 35.9 bits (79), Expect = 1.00
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = -3
Query: 127 LRWCEWKGVQQTTLRVTYEAKHQLINILTTAIGFNEERCGTQ 2
+R+CE K + TLR+T+EAK QL IL + GF E+ TQ
Sbjct: 937 IRFCEHKRLNMATLRMTWEAKVQLKEILINS-GFPEDCLLTQ 977
>UniRef50_Q4T4A4 Cluster: Chromosome undetermined SCAF9761, whole
genome shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF9761, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1091
Score = 95.1 bits (226), Expect = 2e-18
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Frame = +3
Query: 243 HREE-KVLTTEGKPALIHKTSVNC--SNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPI 413
H+E+ K+LTTEG+ ALIHK+SVNC + + FPSP FVF EK+RTRAIS K T+V P+
Sbjct: 943 HKEKRKILTTEGRAALIHKSSVNCPFGSQDLTFPSPFFVFSEKIRTRAISAKGMTLVTPL 1002
Query: 414 HLLLFGCNKVEWVDNVVRLDNWLNFQM 494
LLLF K+ +VV LD+W+ ++
Sbjct: 1003 QLLLFAWKKMTSNGDVVELDDWIKLRV 1029
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 127 GFNEECCVPQRWMPNGPDPTLDLVIALMCMGLYPNVCLH 243
GF EE + Q + GPD LD+V++L+ G YPNVC H
Sbjct: 905 GFPEESLMTQMFTTVGPDNNLDVVVSLLTFGSYPNVCFH 943
Score = 36.3 bits (80), Expect = 0.76
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -3
Query: 121 WCEWKGVQQTTLRVTYEAKHQLINILTTAIGFNEERCGTQ 2
+CE K + +TLR+T+EAK QL IL + GF EE TQ
Sbjct: 876 FCEHKRLNMSTLRMTWEAKVQLKEILVNS-GFPEESLMTQ 914
>UniRef50_Q22307 Cluster: Probable ATP-dependent RNA helicase A; n=3;
Caenorhabditis|Rep: Probable ATP-dependent RNA helicase A
- Caenorhabditis elegans
Length = 1301
Score = 76.2 bits (179), Expect = 8e-13
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Frame = +3
Query: 249 EEKVLTTEGKPALIHKTS--VNCSN-MEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHL 419
+ KVLT E ALI+K S V +N E FPSPL VF EKVRTR ISCKQ ++++ I L
Sbjct: 1023 KRKVLTIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTEKVRTRCISCKQMSVISAIQL 1082
Query: 420 LLFGCNKVEWV-DNVVRLDNWLNFQM 494
L+FG KVE V + +VR+D + +M
Sbjct: 1083 LVFGSRKVECVGEGLVRIDETITIRM 1108
Score = 33.5 bits (73), Expect = 5.3
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 112 IRTTVGFNEECCVPQRWMPNGPDPTLDLVIALMCMGLYPNVCLHI 246
+R F E+ NGPD L+L+ +L+ M LYPNV ++
Sbjct: 977 LRNQCSFPEDILFDISVNVNGPDRELNLMRSLLVMALYPNVAYYV 1021
>UniRef50_Q4QI28 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative - Leishmania
major
Length = 1234
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/66 (37%), Positives = 43/66 (65%)
Frame = +3
Query: 255 KVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGC 434
K T +G L+H +SV ++ E F SPL V+ +KV+T A ++ ++VAP+H++LFG
Sbjct: 1013 KFTTFDGSECLVHPSSV--ASKETSFASPLLVYVDKVKTSATFLREVSVVAPLHVILFGS 1070
Query: 435 NKVEWV 452
+E++
Sbjct: 1071 GNLEYL 1076
>UniRef50_Q016V0 Cluster: ATP-dependent RNA helicase A; n=1;
Ostreococcus tauri|Rep: ATP-dependent RNA helicase A -
Ostreococcus tauri
Length = 182
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 288 IHKTSVNCSNMEQKFPS-PLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCN-KVEWVDNV 461
+H +SVN + PS P V+ EK+RT + + ++VAP LLLFG N +VE +
Sbjct: 62 VHPSSVNRGIGSDRKPSHPFMVYHEKMRTARVYLRDCSVVAPEALLLFGGNLEVEHANAR 121
Query: 462 VRLDNWLNFQ 491
V +DNW+ F+
Sbjct: 122 VLMDNWIRFK 131
>UniRef50_Q84VZ2 Cluster: At1g58060; n=8; core eudicotyledons|Rep:
At1g58060 - Arabidopsis thaliana (Mouse-ear cress)
Length = 260
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 288 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCN-KVEWVDNVV 464
IH +S+N SN + F +P VF EKV T + + TT+V+P +LLFG + V V
Sbjct: 140 IHPSSIN-SNFKA-FQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSINVHHQSGSV 197
Query: 465 RLDNWL 482
+D WL
Sbjct: 198 TIDGWL 203
>UniRef50_Q01C44 Cluster: MRNA splicing factor ATP-dependent RNA
helicase; n=2; Ostreococcus|Rep: MRNA splicing factor
ATP-dependent RNA helicase - Ostreococcus tauri
Length = 1262
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 288 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCN-KVEWVDNVV 464
IH +SVN +KF + V+ E+V+T AI + T V P LLLFG +V+ +
Sbjct: 1137 IHPSSVNFE--AKKFITKWLVYHERVQTTAIYVRDCTAVTPYQLLLFGGKIEVQHAQGTI 1194
Query: 465 RLDNWLNFQ 491
+D W FQ
Sbjct: 1195 SIDRWATFQ 1203
>UniRef50_Q01DF3 Cluster: MRNA splicing factor ATP-dependent RNA
helicase; n=2; Ostreococcus|Rep: MRNA splicing factor
ATP-dependent RNA helicase - Ostreococcus tauri
Length = 1546
Score = 42.7 bits (96), Expect = 0.009
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 246 REEKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLL 425
RE K + + +H TSVN K+ S V+ E+V T + + TMV LLL
Sbjct: 1417 RELKYYSKDLGRVFLHPTSVNFHC--GKYESRWIVYSERVETAKVYIRDNTMVGAYSLLL 1474
Query: 426 FGCN-KVEWVDNVVRLDNWLNFQ 491
FG + VE V +D W FQ
Sbjct: 1475 FGGDVSVEHDKGFVAVDGWARFQ 1497
>UniRef50_Q00YU4 Cluster: MRNA splicing factor ATP-dependent RNA
helicase; n=2; Ostreococcus|Rep: MRNA splicing factor
ATP-dependent RNA helicase - Ostreococcus tauri
Length = 1680
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 VLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCN 437
V T +H TSV C + +F SP ++ EKVRT + + T V LLLFG
Sbjct: 1153 VRTKHDSDVHLHPTSV-CYGLN-RFDSPFLLYHEKVRTTKVYLRDATAVGSYPLLLFGGK 1210
Query: 438 -KVEWVDNVVRLDNWLNFQ 491
K++ + D W++F+
Sbjct: 1211 IKIDHERSKASCDGWIHFK 1229
>UniRef50_Q7XQP1 Cluster: OSJNBa0084A10.14 protein; n=4; Oryza
sativa|Rep: OSJNBa0084A10.14 protein - Oryza sativa
(Rice)
Length = 1439
Score = 41.9 bits (94), Expect = 0.015
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 288 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCNKV-EWVDNVV 464
IH +S+N S ++P VF EKV T + + T++++P LLLFG V + VV
Sbjct: 1319 IHPSSMNHSLKAGQYP--FLVFLEKVETSKVFLRDTSVISPYSLLLFGGTMVIQHQTGVV 1376
Query: 465 RLDNWL 482
+D WL
Sbjct: 1377 IIDGWL 1382
>UniRef50_Q4SQ99 Cluster: Chromosome 4 SCAF14533, whole genome shotgun
sequence; n=2; Tetraodontidae|Rep: Chromosome 4
SCAF14533, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1337
Score = 41.5 bits (93), Expect = 0.020
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 264 TTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCN-K 440
T +G+ A +H +SVN N++ ++ EKV+ I + TT++ P +LLFG +
Sbjct: 1208 TPQGR-AQVHPSSVN-RNLQTH---GWLLYQEKVKYTKIYLRDTTLIPPFPMLLFGGDID 1262
Query: 441 VEWVDNVVRLDNWLNFQM 494
V+ + ++ LD W++FQ+
Sbjct: 1263 VQHRERLITLDGWIHFQV 1280
>UniRef50_Q7Z478 Cluster: Putative ATP-dependent RNA helicase DHX29;
n=34; Euteleostomi|Rep: Putative ATP-dependent RNA
helicase DHX29 - Homo sapiens (Human)
Length = 1369
Score = 41.5 bits (93), Expect = 0.020
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 VLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCN 437
V T +GK A +H +SVN + ++ EK+R + ++TT++ P +LLFG +
Sbjct: 1247 VETAQGK-AQVHPSSVNRDLQTHGW----LLYQEKIRYARVYLRETTLITPFPVLLFGGD 1301
Query: 438 -KVEWVDNVVRLDNWLNFQ 491
+V+ + ++ +D W+ FQ
Sbjct: 1302 IEVQHRERLLSIDGWIYFQ 1320
>UniRef50_A5C7X9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1180
Score = 41.1 bits (92), Expect = 0.027
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 264 TTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFG 431
T E L+H SVN E K P P VF EK++ ++ + +T V+ LLLFG
Sbjct: 925 TMEDGQVLLHSNSVNAR--ECKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVLLLFG 978
>UniRef50_Q10CV6 Cluster: Helicase associated domain family protein,
expressed; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Helicase associated domain family
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 1138
Score = 40.3 bits (90), Expect = 0.046
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 243 HREEKVL--TTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIH 416
HRE + T + L++ SVN Q P P VFGEKV+ A+ + +T V+
Sbjct: 869 HRENSMSFKTMDDGQVLLYANSVNAKY--QTIPYPWLVFGEKVKVNAVFIRDSTGVSDSI 926
Query: 417 LLLFG--CNKVEWVDNVVRLDNWLNFQM 494
L+LFG K ++ LD +++ M
Sbjct: 927 LILFGGAVTKGSMAGHLKMLDGYIDLFM 954
>UniRef50_A2Z8G0 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1035
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 288 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFG 431
IH +SVN +FP P V+ EKV+T +I + +T ++ LLLFG
Sbjct: 913 IHPSSVNAGI--HQFPLPYLVYSEKVKTASIYVRDSTNISDYALLLFG 958
>UniRef50_UPI0000DB745A Cluster: PREDICTED: similar to CG1582-PA; n=1;
Apis mellifera|Rep: PREDICTED: similar to CG1582-PA -
Apis mellifera
Length = 1305
Score = 38.3 bits (85), Expect = 0.19
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +3
Query: 288 IHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGCN--KVEWVDN- 458
IH +SVN FPSP VF EKV+T I K+ +MV + L+LF K+E +
Sbjct: 1183 IHPSSVNFH--VGYFPSPYLVFQEKVKTSKIFIKEVSMVPILPLILFSDYELKIELHNGI 1240
Query: 459 -VVRL-DNWLNFQM 494
+V L D+W+ F +
Sbjct: 1241 FIVSLEDDWILFSV 1254
>UniRef50_UPI0000D55D80 Cluster: PREDICTED: similar to CG1582-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG1582-PA
- Tribolium castaneum
Length = 1241
Score = 38.3 bits (85), Expect = 0.19
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 267 TEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLF 428
T + +H +SVN S + FPSP V+ EKV+T + + T++ I L+LF
Sbjct: 1112 TVKETVFLHPSSVNFS--AKNFPSPYLVYQEKVKTSKVYFRDCTVIPVISLVLF 1163
>UniRef50_UPI00015B51BF Cluster: PREDICTED: hypothetical protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
- Nasonia vitripennis
Length = 990
Score = 37.1 bits (82), Expect = 0.43
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 KVLTTEGKPALIHKTSVNCSNME-QKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLL 422
K LTTE + +H +S+N FPSP + K +T AI TT V+P+ LL
Sbjct: 831 KALTTEKEMVKLHPSSLNNKVTSLSSFPSPYITYFLKRKTTAIYLFDTTCVSPVALL 887
>UniRef50_UPI00015B4181 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ATP-dependent RNA helicase - Nasonia
vitripennis
Length = 1271
Score = 37.1 bits (82), Expect = 0.43
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = +3
Query: 216 GPVP*RLSTHREEKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQT 395
G +P R E + T E IH +S+N S + SP VF EK++T I ++
Sbjct: 1126 GAIP-RQPKPEELRFQTKEDGMVNIHPSSINFS--VGYYTSPYLVFQEKIKTSRIFIREV 1182
Query: 396 TMVAPIHLLLF 428
TMV + L+LF
Sbjct: 1183 TMVPMLALVLF 1193
>UniRef50_Q177H6 Cluster: Dynactin; n=4; Culicidae|Rep: Dynactin -
Aedes aegypti (Yellowfever mosquito)
Length = 1217
Score = 36.3 bits (80), Expect = 0.76
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 260 INDGRETGIDTQDLSELQQHGAEVPLASVRFRREGAHPGHQLQ 388
I+DG TG+ T + +L+Q A + VR R AH H++Q
Sbjct: 352 ISDGTGTGVSTYEFKQLEQQNARLRETLVRLRDLSAHEKHEIQ 394
>UniRef50_Q6P158 Cluster: Putative ATP-dependent RNA helicase DHX57;
n=41; Euteleostomi|Rep: Putative ATP-dependent RNA
helicase DHX57 - Homo sapiens (Human)
Length = 1386
Score = 36.3 bits (80), Expect = 0.76
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +3
Query: 249 EEKVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLF 428
E K +T IH +SVN + F SP ++ EK++T + + +MV+ L+LF
Sbjct: 1251 ELKFVTKNDGYVHIHPSSVNYQ--VRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPLVLF 1308
Query: 429 GCNKV----EWVDNVVRLDN-WLNF 488
G +V + + VV LD+ W+ F
Sbjct: 1309 GGGQVNVQLQRGEFVVSLDDGWIRF 1333
>UniRef50_UPI0000DA22D1 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 625
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -1
Query: 399 WW-SACS*WPGCAPSRRKRTEARGTSAPCC 313
WW C WPG A R R TSAPCC
Sbjct: 565 WWCQLCQRWPGSAAPRGVRASPFTTSAPCC 594
>UniRef50_UPI000069E541 Cluster: Probable ATP-dependent RNA helicase
DHX36 (EC 3.6.1.-) (DEAH box protein 36) (MLE-like
protein 1) (RNA helicase associated with AU-rich element
ARE).; n=1; Xenopus tropicalis|Rep: Probable
ATP-dependent RNA helicase DHX36 (EC 3.6.1.-) (DEAH box
protein 36) (MLE-like protein 1) (RNA helicase associated
with AU-rich element ARE). - Xenopus tropicalis
Length = 967
Score = 35.1 bits (77), Expect = 1.7
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 255 KVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGC 434
KV T IH SVN E +F V+ K+RT +I T V+P LL FG
Sbjct: 817 KVYTKSDGKVNIHPKSVNVE--ETEFHYSWLVYHLKMRTTSIYLYDCTEVSPYSLLFFGG 874
Query: 435 N---KVEWVDNVVRLDNWLNFQ 491
+ + + + + +D W+ FQ
Sbjct: 875 DISIQKDKDQDTIAVDEWIVFQ 896
>UniRef50_Q4RXR5 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 337
Score = 34.3 bits (75), Expect = 3.0
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 319 WSRSSPRLCSFSARRCAPGPSAASRPPWSLP 411
WSR P + AR GP+ AS+PPWS P
Sbjct: 218 WSRRLPGVAD--ARAAGGGPATASKPPWSAP 246
>UniRef50_Q0RIR9 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized protein
- Frankia alni (strain ACN14a)
Length = 1683
Score = 34.3 bits (75), Expect = 3.0
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 9/124 (7%)
Frame = +2
Query: 266 DGRETGIDTQDLSELQQHGAEVPLASVRFRREGAHP-GHQLQADHHGRSHTSAALRL*QS 442
DGR + D ++ G ++P+A RR AH G + T A L
Sbjct: 1366 DGRVLAVG-DDQGHVRFFGVDLPVARAGLRRSAAHATGPRAHLAWAAAPWTEAVL----- 1419
Query: 443 GMGGQRGAAGQLAEL------PDVAAIGALIIALRPAIERI--VERAAAQPDAALQFSPA 598
G +G + + L PDVA +G ++L +R+ ERAAA A+ FSP
Sbjct: 1420 AAYGSQGPSTPIRSLVFSPSGPDVAVVGEAGLSLWRPTQRLPLFERAAAIEPVAVTFSPT 1479
Query: 599 ERKV 610
R V
Sbjct: 1480 GRMV 1483
>UniRef50_Q8SWT2 Cluster: GH12763p; n=2; Sophophora|Rep: GH12763p -
Drosophila melanogaster (Fruit fly)
Length = 942
Score = 34.3 bits (75), Expect = 3.0
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 264 TTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFG 431
T +G+ H +SVN E F S FV+ ++ ++ + +TMV P+ L++FG
Sbjct: 800 TDDGRRVNFHPSSVNSG--ESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALIIFG 853
>UniRef50_Q1GW96 Cluster: Adenylate/guanylate cyclase precursor;
n=2; Sphingomonadaceae|Rep: Adenylate/guanylate cyclase
precursor - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 699
Score = 33.5 bits (73), Expect = 5.3
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 237 TNVRVQAHAHEGYDQVQ-SWVRSVRHPTLWNTAFFVEAYGGANGRAYSRPRCVLLTRL 67
T + ++ HAH Q+ +W R + PTLW A V GG R R V L L
Sbjct: 314 TMIGLEVHAHMLAQQLDGAWARPLAGPTLWVLALLVVLAGGLTSLIDMRARWVALAFL 371
>UniRef50_Q7G4G7 Cluster: Transferase family protein, expressed;
n=6; Oryza sativa|Rep: Transferase family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 485
Score = 33.5 bits (73), Expect = 5.3
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 458 RGAAGQLAELPDVAAIGALIIALRPAIERIVERAAAQPDAALQFSPAERKVVE 616
R +G +A P +A A A PA++ RAAA DA L +P +R VVE
Sbjct: 212 RLGSGAVARTPFASAAAASASASSPALQNGARRAAAAADAMLS-TPPDRMVVE 263
>UniRef50_A7SKC8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 163
Score = 33.5 bits (73), Expect = 5.3
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 396 TMVAPIHLLLFGCNKVEWVDNVVRLDNWLNFQM 494
TMV P+ LLLF ++V +V+ +DNW+ +M
Sbjct: 2 TMVNPLQLLLFSSSRVLSSKDVICMDNWVQLRM 34
>UniRef50_Q4TBH9 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 13
SCAF7124, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1229
Score = 33.1 bits (72), Expect = 7.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 332 PLASVRFRREGAHPGHQLQADHHGRSHTSAALRL*QSGMGGQRGAAG 472
PL+ + RR G H G + + R LRL +G G +RG G
Sbjct: 727 PLSHLHCRRAGGHGGRKRRPQERARRQPGLELRLPAAGEGPERGGPG 773
>UniRef50_Q58KH0 Cluster: ORF320; n=2; Leptospirillum
ferrooxidans|Rep: ORF320 - Leptospirillum ferrooxidans
Length = 320
Score = 33.1 bits (72), Expect = 7.0
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = -3
Query: 706 VFGLRIGTMAC*RLVLCCSHRRPSHKLPQTFYHLSLCRRELQRRVGLGRRALHDPLDGGP 527
VFGL GT+ RL + + RRP+ ++ Q + S E+ ++G R LHD +
Sbjct: 57 VFGLSSGTVHHSRLPIFAATRRPTERI-QWIFENSWGTAEVTGKLGQNHRDLHDLVMTEG 115
Query: 526 QRYDEGADR 500
Y +G R
Sbjct: 116 IEYKQGLQR 124
>UniRef50_Q2R239 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 139
Score = 33.1 bits (72), Expect = 7.0
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 275 ETGIDTQDLSELQQHGAEVPLASVRFRREGAHPGHQLQ--ADH 397
+ G+D +ELQ+HG EV +VR R G P ++ ADH
Sbjct: 72 KAGMDQVRTAELQKHGTEVAAVTVRLRGGGGPPPDMVEFVADH 114
>UniRef50_Q5DD69 Cluster: SJCHGC06326 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06326 protein - Schistosoma
japonicum (Blood fluke)
Length = 247
Score = 33.1 bits (72), Expect = 7.0
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +3
Query: 399 MVAPIHLLLFGCNKVEWVDN------VVRLDNWLNFQM 494
MV PI L+LFGC W ++ +V +D+W+ F+M
Sbjct: 1 MVNPIQLMLFGCRSAVWRNSDSNDKGIVVIDDWIPFRM 38
>UniRef50_UPI0000E23647 Cluster: PREDICTED: similar to putative
transmembrane protein; n=1; Pan troglodytes|Rep:
PREDICTED: similar to putative transmembrane protein -
Pan troglodytes
Length = 363
Score = 32.7 bits (71), Expect = 9.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 396 TMVAPIHLLLFGCNKVEWVDNVVRLDNWLNFQM 494
T+V P+ LLLF KV+ +V D+W+ Q+
Sbjct: 2 TLVTPLQLLLFASKKVQSDGQIVLADDWIKLQI 34
>UniRef50_Q3M5E6 Cluster: Multicopper oxidase, types 2 and 3
precursor; n=1; Anabaena variabilis ATCC 29413|Rep:
Multicopper oxidase, types 2 and 3 precursor - Anabaena
variabilis (strain ATCC 29413 / PCC 7937)
Length = 556
Score = 32.7 bits (71), Expect = 9.3
Identities = 27/104 (25%), Positives = 43/104 (41%)
Frame = +2
Query: 218 ACTLTFVYTSGREGINDGRETGIDTQDLSELQQHGAEVPLASVRFRREGAHPGHQLQADH 397
A +T +T G DG + ++++ + P + + HPG +
Sbjct: 134 AFNITNFHTHGLHVSPDGNSDNV-LREMAPKKDLNGNSPEYPIEIKLPEIHPGGTDW--Y 190
Query: 398 HGRSHTSAALRL*QSGMGGQRGAAGQLAELPDVAAIGALIIALR 529
H H S AL++ SGM G G L LP++AA I L+
Sbjct: 191 HSHFHGSTALQV-SSGMAGALIVEGGLDRLPEIAAAKEKIFVLQ 233
>UniRef50_A1GGF0 Cluster: Coagulation factor 5/8 type-like; n=2;
Salinispora|Rep: Coagulation factor 5/8 type-like -
Salinispora arenicola CNS205
Length = 1435
Score = 32.7 bits (71), Expect = 9.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 604 SLCRRELQRRVGLGRRALHDPLDGGPQRYDEGADRG 497
++ R+ LQR GL R A P+ GGP DE D G
Sbjct: 556 AVVRQALQRSPGLSRVATFGPIRGGPSEPDEIRDEG 591
>UniRef50_Q9H2U1 Cluster: Probable ATP-dependent RNA helicase DHX36;
n=20; Deuterostomia|Rep: Probable ATP-dependent RNA
helicase DHX36 - Homo sapiens (Human)
Length = 1008
Score = 32.7 bits (71), Expect = 9.3
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 255 KVLTTEGKPALIHKTSVNCSNMEQKFPSPLFVFGEKVRTRAISCKQTTMVAPIHLLLFGC 434
KV T +H SVN + F ++ K+RT +I T V+P LL FG
Sbjct: 858 KVYTKTDGLVAVHPKSVNVEQTD--FHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGG 915
Query: 435 NKVEWVDN---VVRLDNWLNFQ 491
+ DN + +D W+ FQ
Sbjct: 916 DISIQKDNDQETIAVDEWIVFQ 937
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,287,369
Number of Sequences: 1657284
Number of extensions: 14467930
Number of successful extensions: 48231
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 45864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48169
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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