Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1649
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   1.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   2.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.3  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   4.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   4.3  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   4.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 368 HPGHQLQADHHGRSHTSAA 424
           H GH + A HH  +H  AA
Sbjct: 325 HAGHHIHAQHHVVNHHVAA 343


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 127 GFNEECCVPQRWMPNGPDPTLDLVI 201
           GFNE     +RWMP+     LDL++
Sbjct: 609 GFNEFYNQRRRWMPSTMANILDLLM 633


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 127 GFNEECCVPQRWMPNGPDPTLDLVI 201
           GFNE     +RWMP+     LDL++
Sbjct: 842 GFNEFYNQRRRWMPSTMANILDLLM 866


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 127 GFNEECCVPQRWMPNGPDPTLDLVI 201
           GFNE     +RWMP+     LDL++
Sbjct: 842 GFNEFYNQRRRWMPSTMANILDLLM 866


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 94  SAVRPSIRTTVGFNEEC 144
           S V+PS+ T  GF +EC
Sbjct: 65  SQVQPSVITPTGFLKEC 81


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 316 TWSRSSPRLCSFSARRCAPGPSAASRPP 399
           T  + SPR+ +     C P P+  SR P
Sbjct: 341 TGRKVSPRVNTIKHTSCIPTPNGDSRLP 368


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 150 NTAFFVEAYGGANGRAYSRPRCVL 79
           NT+ +   YGG++   Y+R   V+
Sbjct: 275 NTSLYAGTYGGSDAGPYTREMGVI 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 316 TWSRSSPRLCSFSARRCAPGPSAASRPP 399
           T  + SPR+ +     C P P+  SR P
Sbjct: 341 TGRKVSPRVNTIKHTSCIPTPNGDSRLP 368


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 150 NTAFFVEAYGGANGRAYSRPRCVL 79
           NT+ +   YGG+    Y+R   V+
Sbjct: 276 NTSLYAATYGGSEAGPYTRAMGVI 299


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 150 NTAFFVEAYGGANGRAYSRPRCVL 79
           NT+ +   YGG+    Y+R   V+
Sbjct: 276 NTSLYAATYGGSEAGPYTRAMGVI 299


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 636  HTNSRRHSTTFRSA 595
            HTN+R HS T  S+
Sbjct: 1004 HTNNRTHSATSNSS 1017


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,007
Number of Sequences: 336
Number of extensions: 3423
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)