Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1648
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    27   0.43 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.0  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 201 MLNNRLSNYTPNNSGPTKTTELIQF*FDVSRSSLESCLRY 82
           MLN  L N T    G  K  +  +F FD +R+ LE C  Y
Sbjct: 866 MLNYFLLNLTGPKKGNFKVKDKREFEFDPARTVLEICRIY 905


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 207  LKMLNNRLSNYTPNNS 160
            +K+ +N LSNY PN+S
Sbjct: 1940 VKLSSNELSNYLPNDS 1955


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 207  LKMLNNRLSNYTPNNS 160
            +K+ +N LSNY PN+S
Sbjct: 1941 VKLSSNELSNYLPNDS 1956


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,657
Number of Sequences: 2352
Number of extensions: 11743
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)