Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1646
(691 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 94 1e-19
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 93 2e-19
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 81 1e-15
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 79 3e-15
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 79 4e-15
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 78 6e-15
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 77 1e-14
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 69 5e-12
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 64 1e-10
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 60 2e-09
07_03_0651 + 20287661-20287701,20288034-20288124,20288737-202888... 46 4e-05
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 46 4e-05
04_04_0598 - 26514226-26514545,26516080-26516302 43 3e-04
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 40 0.002
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 39 0.003
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 38 0.010
04_04_1575 + 34548774-34549109,34549979-34550185 36 0.023
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349... 36 0.040
08_02_0497 - 17811413-17811529,17811644-17811724,17812693-178128... 32 0.37
04_04_1248 - 32051679-32052356,32053617-32053778,32054147-320542... 32 0.37
03_05_0381 + 23639013-23639146,23639215-23639917 32 0.37
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 32 0.49
02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952 32 0.49
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 31 0.86
03_06_0376 + 33479776-33479958,33481055-33481236,33481345-334814... 31 1.1
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 2.6
01_01_0255 + 2079112-2079196,2079334-2079514,2079712-2079853,207... 28 8.0
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/92 (43%), Positives = 61/92 (66%)
Frame = +3
Query: 258 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYS 437
HC++LAP+YA AA L+ + LAKVDAT++ DLA+ Y V+G+PT+ FF +G P DY+
Sbjct: 104 HCQALAPDYAAAAADLSPLAHQVALAKVDATEDTDLAQKYDVQGFPTILFFIDGVPKDYN 163
Query: 438 GGRQADDIISWLKKKTGPPAVEVTLLNRLKNL 533
G R + I+SW+ KK P +T ++ + +
Sbjct: 164 GARTKEAIVSWVNKKLAPGVQNITTVDEAEKI 195
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG----S 422
GHC+ L P Y K L +S + +AK+D T + G+PT+ F+ G
Sbjct: 459 GHCQELEPTYNKLGKHLRGIDS-LVIAKMDGTANEHPRAK--PDGFPTILFYPAGKKSFE 515
Query: 423 PIDYSGGRQADDIISWLKKKTGPP 494
PI + G R ++ ++KK P
Sbjct: 516 PITFEGDRTVVEMYKFIKKHASIP 539
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 163 EENVLVLSKANFETVITTTEYILVEFYAPWWA 258
E +V +LS ANF + + +++VEFYAPW A
Sbjct: 72 ETHVFLLSAANFSDFLASHRHVMVEFYAPWCA 103
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD--LAESYGVRGYPTLKFFRN-GSP 425
GHCK LAPEY KAA +L++ + PI LAKVDA E++ LA Y ++G+PTLK FRN G
Sbjct: 70 GHCKKLAPEYEKAAQELSKHDPPIVLAKVDANDEKNKPLATKYEIQGFPTLKIFRNQGKN 129
Query: 426 I-DYSGGRQADDIISWLKKKTGPPAVEV 506
I +Y G R+A+ I+ +LKK+ GP + E+
Sbjct: 130 IQEYKGPREAEGIVEYLKKQVGPASKEI 157
Score = 64.5 bits (150), Expect = 8e-11
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFR-NGSPID 431
GHCK LAP +AAT L + + + +AK+DAT D+ + V+GYPTL F +G +
Sbjct: 415 GHCKKLAPILDEAATTL-KSDKDVVIAKMDAT-ANDVPSEFDVQGYPTLYFVTPSGKMVP 472
Query: 432 YSGGRQADDIISWLKK 479
Y GR AD+I+ ++KK
Sbjct: 473 YESGRTADEIVDFIKK 488
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 166 ENVLVLSKANFETVITTTEYILVEFYAPW 252
E VL L F+ + +++VEFYAPW
Sbjct: 40 EAVLTLDADGFDEAVAKHPFMVVEFYAPW 68
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI-- 428
GHCK LAP Y K A+ ++ + +A +DA + +DLAE YGV GYPTLKFF G+
Sbjct: 150 GHCKHLAPIYEKLASVYKLDDGVV-IANLDADKHKDLAEKYGVSGYPTLKFFPKGNKAGE 208
Query: 429 DYSGGRQADDIISWLKKKTG 488
DY GGR+ DD + ++ +K G
Sbjct: 209 DYDGGRELDDFVKFINEKCG 228
Score = 64.9 bits (151), Expect = 6e-11
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PI 428
GHCK LAPEY K + +S + +AKVD + + + YGV GYPT+++F GS P
Sbjct: 31 GHCKKLAPEYEKLGASFKKAKS-VFIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPK 89
Query: 429 DYSGGRQADDIISWLKKKTG 488
Y G R A+ + ++ + G
Sbjct: 90 KYEGQRSAEALAEFVNTEGG 109
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 169 NVLVLSKANFETVITT-TEYILVEFYAPW 252
+V+VL NF++++ + ILVEFYAPW
Sbjct: 120 SVVVLGPDNFDSIVLDENKDILVEFYAPW 148
>02_04_0182 +
20719782-20720033,20720502-20720605,20720693-20721066,
20721302-20721609,20721853-20722092
Length = 425
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHCK LAP+ +AA LA +PI +AKV+A + + L YGV G+PTL F +G+P +Y
Sbjct: 76 GHCKRLAPQLDEAAPVLAGLSTPIVVAKVNADKYKKLGSKYGVDGFPTLMLFDHGTPTEY 135
Query: 435 SGGRQADDIISWLKKKTGP 491
+G R+AD ++ LKK P
Sbjct: 136 TGSRKADLLVENLKKLVAP 154
Score = 34.7 bits (76), Expect = 0.070
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 151 EVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
++P + VL L NF+ + + V+FYAPW
Sbjct: 41 QIPRDGRVLELDDGNFDAAVRAAGLLFVDFYAPW 74
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE--QDLAESYGVRGYPTLKFFRN--GS 422
GHC LAPEY AA L + P+ LAKVDA+ + + LA +GV+GYPT++ R+
Sbjct: 55 GHCNQLAPEYEAAAAALRSHDPPVVLAKVDASADLNRGLAGEHGVQGYPTIRILRDRGAR 114
Query: 423 PIDYSGGRQADDIISWLKKKTGPPAVEV 506
+Y+G R A I+++LK++ GP +VE+
Sbjct: 115 SHNYAGPRDAAGIVAYLKRQAGPASVEI 142
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/92 (32%), Positives = 50/92 (54%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHC+ LAP + A L ++E + +AK+D T D+ + V GYP++ F+ +G +
Sbjct: 401 GHCQKLAPILEEVAVSLKDDED-VVIAKMDGT-ANDVPSDFAVEGYPSMYFYSSGGNLLP 458
Query: 435 SGGRQADDIISWLKKKTGPPAVEVTLLNRLKN 530
GR A++II ++ K G E T +K+
Sbjct: 459 YDGRTAEEIIDFITKNKGSRPGEATTTESVKD 490
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 118 AIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWWATAN 267
A ALL LA E VL L NF V+ ++I+VEFYAPW N
Sbjct: 10 AFALLLLA-SSAAAEGEAVLTLDAGNFTEVVGAHDFIVVEFYAPWCGHCN 58
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 78.2 bits (184), Expect = 6e-15
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI-- 428
GHCK LAP Y K A+ ++E + +A +DA + LAE YGV G+PTLKFF G+
Sbjct: 179 GHCKHLAPIYEKLASVYKQDEGVV-IANLDADKHTALAEKYGVSGFPTLKFFPKGNKAGE 237
Query: 429 DYSGGRQADDIISWLKKKTG 488
DY GGR+ DD + ++ +K G
Sbjct: 238 DYDGGRELDDFVKFINEKCG 257
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PI 428
GHCK LAPEY K + +S + +AKVD + + + YGV GYPT+++F GS P
Sbjct: 60 GHCKKLAPEYEKLGASFKKAKS-VLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPK 118
Query: 429 DYSGGRQADDIISWLKKK 482
Y G R A+ + ++ +
Sbjct: 119 KYEGQRTAEALAEYVNSE 136
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 100 RVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
R + + + L+ A + ++VL L+++ FE + LVEFYAPW
Sbjct: 8 RKALASLLLLVAAAAAVSTASADDVLALTESTFEKEVGQDRAALVEFYAPW 58
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 169 NVLVLSKANFETVITT-TEYILVEFYAPW 252
+V+VL+ F++V+ T+ +LVEFYAPW
Sbjct: 149 SVVVLTPETFDSVVLDETKDVLVEFYAPW 177
>04_03_0988 -
21469811-21469831,21470823-21471047,21471327-21471634,
21471864-21472234,21472327-21472430,21473086-21473325
Length = 422
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHCK LAPE +AA LA PI +AKV+A + + L YGV G+PTL F +G PI+Y
Sbjct: 72 GHCKRLAPELDEAAPVLAGLSEPIIVAKVNADKYRKLGSKYGVDGFPTLMLFIHGVPIEY 131
Query: 435 SGGRQADDIISWLKKKTGP 491
+G R+AD ++ L K P
Sbjct: 132 TGSRKADLLVRNLNKFVAP 150
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 103 VLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
+L+ + A +E P + V+ L +++FE + +Y+ V+FYAPW
Sbjct: 21 LLLLLSFHAAAAAAAEEFPRDGRVIELDESSFEAALGAIDYLFVDFYAPW 70
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 68.5 bits (160), Expect = 5e-12
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 23/107 (21%)
Frame = +3
Query: 255 GHCKSLAPE-------------------YAKAATKLAEEESPIKLAKVDATQE--QDLAE 371
GHCK LAPE Y KAA+ L + E P+ LAKVDA E ++L +
Sbjct: 62 GHCKQLAPEVTDYFDTFSSQHHGRFNIKYEKAASILRKNELPVVLAKVDAYNERNKELKD 121
Query: 372 SYGVRGYPTLKFFRN-GSPI-DYSGGRQADDIISWLKKKTGPPAVEV 506
YGV YPT+K +N GS + Y G R+AD I+ +LK++ GP ++++
Sbjct: 122 KYGVYSYPTIKIMKNGGSDVRGYGGPREADGIVEYLKRQVGPASLKL 168
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN-GSPID 431
GHC+ A + A L +++ I +AK+D T D+ + V GYPT+ F+ + G+ +
Sbjct: 395 GHCRKFALILEEIAVSLQDDQD-IVIAKMDGTVN-DIPTDFTVEGYPTIYFYSSSGNLLS 452
Query: 432 YSGGRQADDIISWLKKKTGPPA 497
Y G R A++IIS++ + GP A
Sbjct: 453 YDGARTAEEIISFINENRGPKA 474
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 97 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
+ +LI ++ +G+ +E+ +E VL L NF V+ +I+V+FYAPW
Sbjct: 11 LAILISSSPTAVGVDATEEL--KEAVLTLDAGNFSEVVAKHPFIVVKFYAPW 60
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = +3
Query: 270 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 449
L P +A+AA L S + AK+D + A + GV+G+PT+ F NG+ ++G
Sbjct: 103 LMPRFAEAAAALRAMGSAVAFAKLDGERYPKAASAVGVKGFPTVLLFVNGTEHQFTGLHT 162
Query: 450 ADDIISWLKKKTGPPAVEV 506
D I++W++KKTG PA +
Sbjct: 163 KDAIVTWVRKKTGAPASRI 181
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS-PID 431
GHC+ L P + KAA L + +A +DA ++LA+ YG+RG+PT+K F G P+D
Sbjct: 60 GHCQQLTPIWEKAAGVL---KGVATVAALDADAHKELAQEYGIRGFPTIKVFVPGKPPVD 116
Query: 432 YSGGRQADDIISW 470
Y G R I+ +
Sbjct: 117 YQGARDVKPIVEF 129
Score = 43.6 bits (98), Expect = 2e-04
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 20/102 (19%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD--------------LAESYGVRGY 392
GHCK LAPE+ KAA L + +KL VD E++ L Y V G+
Sbjct: 196 GHCKKLAPEWKKAAKNL---KGQVKLGHVDCDAEKNTNSSVWSVDKSYRSLMSKYKVEGF 252
Query: 393 PTLKFF--RNGSPIDYSGGRQADDIISW----LKKKTGPPAV 500
PT+ F SP Y G R A I S+ L+ PP V
Sbjct: 253 PTILVFGADKESPFPYQGARVASAIESFALEQLEANAAPPEV 294
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 145 GDEVPTEENVLV-LSKANFETVITTTEYI-LVEFYAPW 252
G TE + + L+ NF+ ++T ++ + +VEF+APW
Sbjct: 157 GSSEKTEPSASIELNSQNFDKLVTKSKDLWIVEFFAPW 194
>07_03_0651 +
20287661-20287701,20288034-20288124,20288737-20288831,
20289433-20289523,20290066-20290250,20290590-20290647,
20290812-20290852,20290935-20291009,20292298-20292354,
20292480-20292546,20292754-20292900,20292986-20293210,
20293332-20293493,20293570-20293647,20293735-20293812
Length = 496
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 270 LAPEYAKAATKLAEEESP-----IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
L P + K A + E P I LAKVD T+E DL + ++GYP+++ FR GS +
Sbjct: 187 LKPSWEKTAKIMRERYDPEMDGRIILAKVDCTEEIDLCRRHHIQGYPSIRIFRKGSDLKE 246
Query: 435 SGG 443
+ G
Sbjct: 247 NQG 249
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 145 GDEVPT--EENVLVLSKANFETVITTTEYILVEFYAPWWATAN 267
GD+V ++ + LS NF++ ++V FYAPW +N
Sbjct: 143 GDDVEENHDDGSVPLSSRNFDSYSHQYPVLVVNFYAPWCYWSN 185
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/88 (29%), Positives = 42/88 (47%)
Frame = +3
Query: 246 SMVGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
S G C+ +AP +A+ A K KVD + +++AE Y V PT F ++G+
Sbjct: 38 SWCGPCRFIAPVFAEYAKKFPGAV----FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAE 93
Query: 426 IDYSGGRQADDIISWLKKKTGPPAVEVT 509
D G + DD+ + + K G A +
Sbjct: 94 ADKVVGARKDDLQNTIVKHVGATAASAS 121
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 431
G CK + P K + E E +K K++ + D+A YGVR PT+ F+NG D
Sbjct: 104 GPCKMIDPVVGKLSK---EYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKD 159
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 246 SMVGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
S G CK + P K + E E + K++ + D+A +G+R PT+ F+NG
Sbjct: 134 SWCGPCKMIDPVIGKLSK---EYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEK 190
Query: 426 ID-YSGGRQADDIISWLKKKTG 488
D G ++S + K G
Sbjct: 191 KDAVIGAVPESTLVSSIDKYIG 212
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 246 SMVGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
S G C+ +AP +A LA++ + KVD + + +AE + V PT F + G
Sbjct: 44 SWCGPCRIIAPVFAD----LAKKHTNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDV 99
Query: 426 IDYSGGRQADDIISWLK 476
D G D++ S L+
Sbjct: 100 KDRVVGAMKDELASKLE 116
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 303 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKK 482
LA + S +V+A ++ +++E+YGV P F + G +D G + + + K
Sbjct: 45 LAVDFSHAVFLRVEAEEQPEISEAYGVTAVPYFVFLKEGKTVDTLEGANPASLANKVAKL 104
Query: 483 TGPPAV 500
GP +V
Sbjct: 105 AGPASV 110
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 428
G C+ +AP AA E E +K+ K+D L E Y V G P+L F++G +
Sbjct: 98 GPCRLIAPVVDWAAE---EYEGRLKIVKIDHDANPQLIEEYKVYGLPSLILFKDGKEV 152
>01_01_0474 -
3488739-3488876,3488996-3489118,3489878-3489991,
3490416-3490452,3490584-3490675,3490878-3490956,
3491640-3491734,3491858-3491991,3492560-3492833,
3493743-3494015,3494976-3495512
Length = 631
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 431
G C+ +AP YA+ +++ +D + D + S+ +R PT F +NG +D
Sbjct: 556 GPCRVIAPVYAE----MSQTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVD 610
>08_02_0497 -
17811413-17811529,17811644-17811724,17812693-17812815,
17812945-17813193
Length = 189
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF 410
G C +A + A E E+ KVD E +LA VRG PTL FF
Sbjct: 113 GPCVLMAQDIEMLAV---EYENNALFVKVDTDDEYELARDMQVRGLPTLYFF 161
>04_04_1248 -
32051679-32052356,32053617-32053778,32054147-32054269,
32054686-32054793
Length = 356
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = +3
Query: 300 KLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 479
+LA+ I VD Q ++ GV+ PT ++ ++ G D++ +
Sbjct: 58 ELAQTHPEILFLYVDVDDVQSVSSKLGVKAMPTFFLIKDKEVVNKIVGANPDEVKKMVDA 117
Query: 480 K------TGPPAVEVTLLNRLKNLSMPILLLYLVSFRTRAQP 587
T PP + V +L L ++S P L L V RT A+P
Sbjct: 118 SAESFGVTAPPDIVVVILTNL-SIS-PSLSLLHVKPRTSAKP 157
>03_05_0381 + 23639013-23639146,23639215-23639917
Length = 278
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 295 AALAYSGARDLQWPTMEHRIQLKC 224
A L +SG RD +WP+ HR L+C
Sbjct: 122 ATLPWSGTRDARWPSAAHRRLLRC 145
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 431
G C+ + P LAE+ + KVD + +A + V P+ F RNG ID
Sbjct: 672 GPCRFIGP----VCKSLAEKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEID 726
>02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952
Length = 206
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAK---VDATQEQ-DLAESYGVRGYPTLKFFRNGS 422
G CK + + K + S + K +D EQ ++A+ ++ P F++NG
Sbjct: 118 GSCKYIEQGFMKLCKGSGDHGSSVVFLKHNVIDEYDEQSEVADRLRIKVVPLFHFYKNGV 177
Query: 423 PIDYSGGRQADDIISWLKKKTGP 491
++ R + II+ ++K T P
Sbjct: 178 LLEAFATRDKERIIAAIQKYTAP 200
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +3
Query: 246 SMVGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
S G CK + P + + A + + + KVD + ++A ++ V PT R G
Sbjct: 53 SWCGPCKMMEPVFKEMAGRFTD----VAFLKVDVDELAEVARTWRVEAMPTFVLARGGEE 108
Query: 426 IDYSGGRQADDI 461
+ G D++
Sbjct: 109 VGRIVGADKDEL 120
>03_06_0376 +
33479776-33479958,33481055-33481236,33481345-33481469,
33481858-33482057,33482629-33482762,33483095-33483158,
33483764-33484441,33484723-33484839
Length = 560
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 363 LAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 488
L YGVRG+P + + + Y G + ++ + K+ TG
Sbjct: 123 LFSRYGVRGFPAILLVNETTMVRYWGPKDLSSLVDFYKETTG 164
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 324 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 428
I KVD ++ +A + VR PT K ++NG+ +
Sbjct: 618 ISFLKVDISESPAVARAENVRTVPTFKIYKNGTRV 652
>01_01_0255 +
2079112-2079196,2079334-2079514,2079712-2079853,
2079934-2080003,2080140-2080303
Length = 213
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 381 VRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPPAV 500
VR + T K F P+ D GG +A DII W +++ V
Sbjct: 5 VRTHRTTKLFGRERPLHDALGGHKAADIILWRERRVSASIV 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,836,399
Number of Sequences: 37544
Number of extensions: 351014
Number of successful extensions: 977
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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