Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1646
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 126 2e-29
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 95 4e-20
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 75 7e-14
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 68 6e-12
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 61 1e-09
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 57 2e-08
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 46 2e-05
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 44 2e-04
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 43 2e-04
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 39 0.004
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 38 0.006
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 4.7
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 28 6.2
SB_13376| Best HMM Match : DUF1213 (HMM E-Value=0.18) 28 8.2
SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21) 28 8.2
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 126 bits (303), Expect = 2e-29
Identities = 55/92 (59%), Positives = 72/92 (78%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHCK+LAPEYAKAA +L E+S IKLAKVDAT E L E + V+GYPT+KFF++G P +Y
Sbjct: 54 GHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEY 113
Query: 435 SGGRQADDIISWLKKKTGPPAVEVTLLNRLKN 530
+GGR A +I+SWL KKTGPPA ++ + +K+
Sbjct: 114 AGGRTAPEIVSWLNKKTGPPAKDLATADAMKD 145
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPID 431
GHCK LAP + + K ++ + I +AK+D+T + E V +PT+K+F + G +D
Sbjct: 415 GHCKQLAPIWDQLGEKY-KDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVD 471
Query: 432 YSGGRQADDIISWLK---KKTGPPAVE 503
Y+GGR DD + +L+ K PA E
Sbjct: 472 YNGGRTLDDFVKFLESGGKAGNEPAAE 498
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +1
Query: 97 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
M++L +AL+ LA +E+ EE+VLVL++ NF+ + +++LVEFYAPW
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPW 52
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2
Query: 488 PPCC*GHSAEQAKELIDANTVIVFGFFSDQSSARAKTFLSTAQVVDDQVFAIVSDEKVIR 667
PP +A+ K+ I +V GFF+D+ S AK FLS A +DD F IVSD+ + +
Sbjct: 132 PPAKDLATADAMKDFITKEVAVV-GFFTDKESDAAKAFLSAADGIDDVEFGIVSDKLLPQ 190
Query: 668 SWRLK 682
S +L+
Sbjct: 191 STKLR 195
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 82 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVITTTEY-ILVEFYAP 249
++N++ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 250 W 252
W
Sbjct: 413 W 413
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 97.9 bits (233), Expect = 7e-21
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHCKSLAPEYAKAA K+ + P+ AK+DAT D+A+ + V GYPTLK FR G+P +Y
Sbjct: 91 GHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEY 150
Query: 435 SGGRQADDIISWLKKKTGP 491
G R+ I+ ++KK++ P
Sbjct: 151 EGPREESGIVEYMKKQSDP 169
Score = 91.9 bits (218), Expect = 4e-19
Identities = 42/79 (53%), Positives = 53/79 (67%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHCK LAPEY KAA +L + + PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y
Sbjct: 206 GHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEY 265
Query: 435 SGGRQADDIISWLKKKTGP 491
G R I S+++ + GP
Sbjct: 266 KGQRDQYGIASYMRSQVGP 284
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +3
Query: 267 SLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYS 437
+L P + K +++ I +AK+DAT D+ +Y V G+PT+ F + +PI +
Sbjct: 558 ALEPTFKKLGKHFRNDKN-IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFD 615
Query: 438 GGRQADDIISWLKKK 482
GGR+ D+I ++++K
Sbjct: 616 GGRELKDLIKFVEEK 630
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 148 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
DEV E++V VL+ NF+ VI ILVEFYAPW
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPW 89
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 157 PTEENVLVLSKANFETVITTTEYILVEFYAPW 252
P L L+K NF V+ +LVEF+APW
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPW 204
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 95.5 bits (227), Expect = 4e-20
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGS-PI 428
GHCK LAPEY AA L + + P+ LAKVD T+ +D YGV GYPTLK FRNG
Sbjct: 568 GHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSK 627
Query: 429 DYSGGRQADDIISWLKKKTGPPAVEVTLLNRLK 527
DY G R + II ++KK+ GP +VE+ ++ L+
Sbjct: 628 DYDGPRDSSGIIRYMKKQAGPSSVEIKSVDHLE 660
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRG 389
GHCKSL P+Y + KL ++ I +AK+DAT D ++ V+G
Sbjct: 893 GHCKSLEPKYNELGEKL-QDVKDIVIAKMDAT-ANDAPPNFSVQG 935
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 375 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 488
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 169 NVLVLSKANFETVITTTEYILVEFYAPW 252
+VL L +NF++ + + +LVEF+APW
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPW 566
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 172 VLVLSKANFETVITT-TEYILVEFYAPW 252
V V+ NF+ ++ T+ +L+EFYAPW
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPW 891
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PI 428
GHCK LAP Y + + S + +AKVDA ++DL + V+G+PT+K+F GS P
Sbjct: 52 GHCKQLAPTYEQLGEAYTQS-SDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPE 110
Query: 429 DYSGGRQADDIISWLKKKTG 488
+Y+GGR +D I ++++KTG
Sbjct: 111 EYNGGRDINDFIKFIEEKTG 130
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 160 TEENVLVLSKANFETVITTTEYILVEFYAPW 252
T+ V+ L+K NF+ V+ ++ LVEFYAPW
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPW 50
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 68.1 bits (159), Expect = 6e-12
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG----- 419
GHC+ LAPE+AKAAT+L + +K+ +DAT A Y V+GYPT+K F G
Sbjct: 110 GHCQRLAPEWAKAATEL---KGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSH 166
Query: 420 SPIDYSGGRQADDIISWLKKKTG----PPAVEVTLLNRL 524
S DY GGR A DII + K PP V + N +
Sbjct: 167 SVEDYQGGRTASDIIQYALDKAADSIEPPEVIQAISNEV 205
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 357 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 464
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 163 EENVLVLSKANFET-VITTTEYILVEFYAPW 252
+E+V+ L+ NFE V+ + + LVEF+APW
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPW 108
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS-PID 431
GHCK+ P+Y KAA ++ + + AK+D T+ D+ + V GYPTL+++ G ++
Sbjct: 177 GHCKNAKPKYEKAAETFKDQPNRV-FAKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVE 235
Query: 432 YSGGRQADDIISWLKKKTGP 491
Y G R +D+IS++++ P
Sbjct: 236 YDGDRVTEDLISFMEEPPLP 255
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHC + P Y KAA L +E++ LA VD T+ +D+A+ + GYPT+K ++ +
Sbjct: 80 GHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKA 139
Query: 435 SGGRQADDIISWL 473
+ + ++ L
Sbjct: 140 ASAEEDSSLVKQL 152
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = +1
Query: 163 EENVLV--LSKANFETVITTTEYILVEFYAPW 252
E++ LV L ++F + TE++LV FYAPW
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPW 175
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 398
GHCK++ PEY AA L E+E P LA VDAT+E L + + V GYPT
Sbjct: 112 GHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTGPP 494
I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + GPP
Sbjct: 268 IAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREGPP 321
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 151 EVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
E+P+E V LS F++ + +++LV FYAPW
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPW 223
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSG 440
C L PEY KAA + P+ VD T L Y +R YPT + N P + G
Sbjct: 317 CMRLLPEYRKAARSFVGK--PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIG 374
Query: 441 GRQADDIISWLK 476
A DII +++
Sbjct: 375 HHNALDIIEFVE 386
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF 410
G C AP+Y + A L + ++ AKV+ Q+ L + YPT++ +
Sbjct: 464 GPCMRFAPKYEQLAKML---KGKVRAAKVNCEQDYGLCSEANIHSYPTVRLY 512
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +3
Query: 270 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 449
+ P + + ++E+ + +AKVD T + +L +R YPT+K + +G Y+G R
Sbjct: 1 MMPAWEALGEQYSKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRN 60
Query: 450 ADDIISWLKK 479
A+D+ ++ K
Sbjct: 61 AEDMKVFVDK 70
Score = 31.1 bits (67), Expect = 0.88
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 219 GVHFS*ILCSMVGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 398
G+HF HC LAP + + A ++ + I ++K++ GYPT
Sbjct: 107 GLHFVKFYAPWCIHCIKLAPIWERLAEDF-KDNADITISKIN--------------GYPT 151
Query: 399 LKFFRNG-SPIDYSGGRQADDIISWL 473
L F++G +YSG R D + ++
Sbjct: 152 LMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +3
Query: 246 SMVGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
S G CKS+AP Y+ L+E+ K+D Q+LA GV PT +FF+N
Sbjct: 37 SWCGPCKSIAPVYSG----LSEKYKQAVFLKIDVDVCQELAAKQGVTAMPTFQFFKNKVK 92
Query: 426 IDYSGGRQADDIISWLKKKTG 488
+D G + +KK G
Sbjct: 93 VDEVRGADPKALEDAIKKWIG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 431
G CKS+AP + + K + + KVD Q Q AES G+R PT F+ N + ID
Sbjct: 41 GPCKSIAPVFTNLSMKFMD----VVFLKVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 LALGDEVPTEENVLV-LSKANFETVITTTEYILVEFYAPW 252
L D VP +E L+ L +NFE + +++LV+FYAPW
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPW 162
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 157 PTEENVLVLSKANFETVITTTEYILVEFYAPW 252
P VL L+ NF I EY+LV+FYAPW
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPW 79
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +3
Query: 258 HCKSLAPEYAKAATK-LAEEESPIKLAKVDATQE----QDLAESYGVRGYPTLKFFRNGS 422
HCK +AP+Y A + L + ++LAKVD + + + Y V+ PT+ F +G
Sbjct: 165 HCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGK 224
Query: 423 PID 431
++
Sbjct: 225 FVE 227
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAK 338
GHCK LAPEY AA L + + P+ LAK
Sbjct: 43 GHCKRLAPEYETAAEALKKNDPPVPLAK 70
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 169 NVLVLSKANFETVITTTEYILVEFYAPW 252
+VL L +NF++ + + +LVEF+APW
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPW 41
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 431
CK L P + +AE++ + LAKVD +LA ++GV PT+ + G I+
Sbjct: 6 CKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVIN 59
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
CK L P + +AE++ + LAKVD +LA ++GV PT+ + G +++
Sbjct: 52 CKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVMEH 106
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 375 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 488
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 181 LSKANFETVITTTEYILVEFYAPW 252
L+ NF+ +I + +LV+FYAPW
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPW 48
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 163 EENVLVLSKANFETVITTTEYILVEFYAPW 252
E + L+ +F+ + E +LV+FYAPW
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPW 50
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 169 NVLVLSKANFETVITTTEYILVEFYA 246
NV++L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 381 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 473
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 222 VHFS*ILCSMVGHCKSLAPEYAKAATKLAEEESPIKL---AKVDATQEQDLAESYGVRGY 392
VHF L MVGH K L P + L + P L + + Q L + +G+
Sbjct: 543 VHFI-ALVYMVGHAKRLTPSSSAVHVNLESKFEPTILNSTVYIISVALQLLTFAVNYKGH 601
Query: 393 PTLKFFRNGSPIDYS 437
P ++ P+ YS
Sbjct: 602 PFMESLLENKPLTYS 616
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 327 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 428
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 324 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSG 440
+ +A V+ +E +LA+ GV+ + F G ++Y G
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYYG 142
>SB_13376| Best HMM Match : DUF1213 (HMM E-Value=0.18)
Length = 1022
Score = 27.9 bits (59), Expect = 8.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +3
Query: 303 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLK-FFRNGSPIDYSGGRQADDIIS-WLK 476
L E ESP + Q + ES G+R +P++ F+ D S R S W K
Sbjct: 594 LVEAESPKDFEDNEEYQNLEQKESSGLRKFPSMPLFYVPKEEYDASVKRNKSMRKSIWQK 653
Query: 477 -KKTGPPAVEVTLLNRLKNLSMP 542
KK P ++ L R K + P
Sbjct: 654 IKKHSPSTENISKLGRPKRTATP 676
>SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21)
Length = 1332
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 554 VFGFFSDQSSARAKTFLSTAQVVDDQVFAIVSDEKVIRSWRLK 682
V G +++ +TF T D+ FAI D+ V+RS+R+K
Sbjct: 167 VIGELRTKTANPGETFTYTLTNGDNLPFAIKDDQVVVRSFRVK 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,996,573
Number of Sequences: 59808
Number of extensions: 380064
Number of successful extensions: 1080
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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