Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1646
(691 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 100 1e-21
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 100 1e-21
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 96 2e-20
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 94 9e-20
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 94 9e-20
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 83 2e-16
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 83 2e-16
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 77 1e-14
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 77 1e-14
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 69 4e-12
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 67 9e-12
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 63 1e-10
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 61 8e-10
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 50 1e-06
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 41 9e-04
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 40 0.001
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 40 0.002
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 40 0.002
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 40 0.002
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 40 0.002
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 38 0.006
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 38 0.008
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 37 0.014
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 37 0.014
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 37 0.014
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 36 0.033
At1g34780.1 68414.m04329 protein disulfide isomerase-related con... 36 0.033
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 35 0.044
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 35 0.044
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 35 0.058
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 35 0.058
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 33 0.18
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 32 0.31
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 32 0.41
At4g08930.1 68417.m01470 thioredoxin-related contains weak simil... 31 0.95
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 31 0.95
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 31 0.95
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 30 1.3
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 30 1.7
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 30 1.7
At1g59990.1 68414.m06758 DEAD/DEAH box helicase, putative (RH22)... 29 2.2
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 29 2.9
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 29 3.8
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 28 5.1
At4g31070.1 68417.m04411 pentatricopeptide (PPR) repeat-containi... 27 8.9
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 27 8.9
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 27 8.9
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 100 bits (239), Expect = 1e-21
Identities = 46/88 (52%), Positives = 64/88 (72%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHC+SLAPEYA AAT+L E+ + LAK+DAT+E +LA+ Y V+G+PTL FF +G Y
Sbjct: 133 GHCQSLAPEYAAAATELKEDG--VVLAKIDATEENELAQEYRVQGFPTLLFFVDGEHKPY 190
Query: 435 SGGRQADDIISWLKKKTGPPAVEVTLLN 518
+GGR + I++W+KKK GP +T L+
Sbjct: 191 TGGRTKETIVTWVKKKIGPGVYNLTTLD 218
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +1
Query: 130 LGLALGDEVPT----EENVLVLSKANFETVITTTEYILVEFYAPW 252
LG D +PT E++V+V+ + NF VI +Y+LVEFYAPW
Sbjct: 87 LGNPDSDPLPTPEIDEKDVVVIKERNFTDVIENNQYVLVEFYAPW 131
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 422
GHC++L P Y K A L +S + + K+D T + G+PT+ FF G+
Sbjct: 472 GHCQALEPMYNKLAKHLRSIDS-LVITKMDGTTNEH--PKAKAEGFPTILFFPAGN 524
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 100 bits (239), Expect = 1e-21
Identities = 46/88 (52%), Positives = 64/88 (72%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHC+SLAPEYA AAT+L E+ + LAK+DAT+E +LA+ Y V+G+PTL FF +G Y
Sbjct: 133 GHCQSLAPEYAAAATELKEDG--VVLAKIDATEENELAQEYRVQGFPTLLFFVDGEHKPY 190
Query: 435 SGGRQADDIISWLKKKTGPPAVEVTLLN 518
+GGR + I++W+KKK GP +T L+
Sbjct: 191 TGGRTKETIVTWVKKKIGPGVYNLTTLD 218
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +1
Query: 130 LGLALGDEVPT----EENVLVLSKANFETVITTTEYILVEFYAPW 252
LG D +PT E++V+V+ + NF VI +Y+LVEFYAPW
Sbjct: 87 LGNPDSDPLPTPEIDEKDVVVIKERNFTDVIENNQYVLVEFYAPW 131
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 422
GHC++L P Y K A L +S + + K+D T + G+PT+ FF G+
Sbjct: 472 GHCQALEPMYNKLAKHLRSIDS-LVITKMDGTTNEH--PKAKAEGFPTILFFPAGN 524
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 95.9 bits (228), Expect = 2e-20
Identities = 43/88 (48%), Positives = 66/88 (75%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE--QDLAESYGVRGYPTLKFFRNG--S 422
GHC+ LAPEY KAA++L+ P+ LAK+DA++E ++ A Y ++G+PTLK RNG S
Sbjct: 59 GHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKS 118
Query: 423 PIDYSGGRQADDIISWLKKKTGPPAVEV 506
DY+G R+A+ I+++LKK++GP +VE+
Sbjct: 119 VQDYNGPREAEGIVTYLKKQSGPASVEI 146
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKF-FRNGSPID 431
GHC+ LAP + A + S I +AK+DAT ++++ V+G+PT+ F +G+ +
Sbjct: 403 GHCQKLAPILDEVALSFQNDPSVI-IAKLDATANDIPSDTFDVKGFPTIYFRSASGNVVV 461
Query: 432 YSGGRQADDIISWLKKKT 485
Y G R +D I++++K +
Sbjct: 462 YEGDRTKEDFINFVEKNS 479
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 112 FTAIALLGLALGD--EVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
F+ + LL L + T+E VL L +NF I+ ++I+VEFYAPW
Sbjct: 9 FSILLLLSLFVSSIRSEETKEFVLTLDHSNFTETISKHDFIVVEFYAPW 57
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 154 VPTEENV---LVLSKANFETVITTTEYILVEFYAPW 252
+P E N +V++++ + V + + +L+EFYAPW
Sbjct: 366 IPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPW 401
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 93.9 bits (223), Expect = 9e-20
Identities = 42/88 (47%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE--QDLAESYGVRGYPTLKFFRNGSPI 428
GHCK LAPEY KAA+ L+ P+ LAK+DA++E ++ A Y V+G+PT+K FRNG
Sbjct: 60 GHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKA 119
Query: 429 --DYSGGRQADDIISWLKKKTGPPAVEV 506
+Y+G R+A+ I+++LKK++GP + E+
Sbjct: 120 VQEYNGPREAEGIVTYLKKQSGPASAEI 147
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKF-FRNGSPID 431
GHC+ LAP + A + +S + +AK+DAT +++ V+G+PT+ F +G+ +
Sbjct: 405 GHCQKLAPILDEVAVSY-QSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVV 463
Query: 432 YSGGRQADDIISWLK 476
Y G RQ + + +++
Sbjct: 464 YEGDRQRESLYLFIR 478
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +1
Query: 112 FTAIALLGLAL------GDEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
FT ++L L+L +E T+E VL L NF I ++I+VEFYAPW
Sbjct: 6 FTLFSILVLSLCASSIRSEETETKEFVLTLDHTNFTDTINKHDFIVVEFYAPW 58
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 154 VPTEENV---LVLSKANFETVITTTEYILVEFYAPW 252
+P E N +V+S + + V+ + + +L+EFYAPW
Sbjct: 368 IPAENNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPW 403
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 93.9 bits (223), Expect = 9e-20
Identities = 42/88 (47%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE--QDLAESYGVRGYPTLKFFRNGSPI 428
GHCK LAPEY KAA+ L+ P+ LAK+DA++E ++ A Y V+G+PT+K FRNG
Sbjct: 60 GHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKA 119
Query: 429 --DYSGGRQADDIISWLKKKTGPPAVEV 506
+Y+G R+A+ I+++LKK++GP + E+
Sbjct: 120 VQEYNGPREAEGIVTYLKKQSGPASAEI 147
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKF-FRNGSPID 431
GHC+ LAP + A + +S + +AK+DAT +++ V+G+PT+ F +G+ +
Sbjct: 405 GHCQKLAPILDEVAVSY-QSDSSVVIAKLDATANDFPKDTFDVKGFPTIYFKSASGNVVV 463
Query: 432 YSGGRQADDIISWLKKK---TGPPAVEVTLLNRLKN 530
Y G R +D IS++ K G P E +K+
Sbjct: 464 YEGDRTKEDFISFVDKNKDTVGEPKKEEETTEEVKD 499
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +1
Query: 112 FTAIALLGLAL------GDEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
FT ++L L+L +E T+E VL L NF I ++I+VEFYAPW
Sbjct: 6 FTLFSILVLSLCASSIRSEETETKEFVLTLDHTNFTDTINKHDFIVVEFYAPW 58
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 154 VPTEENV---LVLSKANFETVITTTEYILVEFYAPW 252
+P E N +V+S + + V+ + + +L+EFYAPW
Sbjct: 368 IPAENNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPW 403
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF--RNGSPI 428
GHCKSLAP Y K AT +EE + +A +DA + L E YGV G+PTLKFF N +
Sbjct: 172 GHCKSLAPTYEKVATVFKQEEGVV-IANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGH 230
Query: 429 DYSGGRQADDIISWLKKKTG 488
DY GGR DD +S++ +K+G
Sbjct: 231 DYDGGRDLDDFVSFINEKSG 250
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PI 428
GHCK LAPEY K + +S + +AKVD +++ + YGV GYPT+++F GS P
Sbjct: 53 GHCKKLAPEYEKLGASFKKAKS-VLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQ 111
Query: 429 DYSGGRQADDIISWLKKKTG 488
Y G R A+ + ++ K+ G
Sbjct: 112 KYEGPRNAEALAEYVNKEGG 131
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 166 ENVLVLSKANF-ETVITTTEYILVEFYAPW 252
+NV+VL+ NF E V+ + +LVEFYAPW
Sbjct: 141 QNVVVLTPDNFDEIVLDQNKDVLVEFYAPW 170
Score = 34.3 bits (75), Expect = 0.077
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 109 IFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
I+ ALL L L V ++V+VL+ +FE + + LVEFYAPW
Sbjct: 6 IWFGFALLALLLVSAVA--DDVVVLTDDSFEKEVGKDKGALVEFYAPW 51
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF--RNGSPI 428
GHCKSLAP Y K AT +EE + +A +DA + L E YGV G+PTLKFF N +
Sbjct: 172 GHCKSLAPTYEKVATVFKQEEGVV-IANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGH 230
Query: 429 DYSGGRQADDIISWLKKKTG 488
DY GGR DD +S++ +K+G
Sbjct: 231 DYDGGRDLDDFVSFINEKSG 250
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PI 428
GHCK LAPEY K + +S + +AKVD +++ + YGV GYPT+++F GS P
Sbjct: 53 GHCKKLAPEYEKLGASFKKAKS-VLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQ 111
Query: 429 DYSGGRQADDIISWLKKKTG 488
Y G R A+ + ++ K+ G
Sbjct: 112 KYEGPRNAEALAEYVNKEGG 131
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 166 ENVLVLSKANF-ETVITTTEYILVEFYAPW 252
+NV+VL+ NF E V+ + +LVEFYAPW
Sbjct: 141 QNVVVLTPDNFDEIVLDQNKDVLVEFYAPW 170
Score = 34.3 bits (75), Expect = 0.077
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 109 IFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
I+ ALL L L V ++V+VL+ +FE + + LVEFYAPW
Sbjct: 6 IWFGFALLALLLVSAVA--DDVVVLTDDSFEKEVGKDKGALVEFYAPW 51
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 76.6 bits (180), Expect = 1e-14
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS-PID 431
G C++L PEYA AAT+L + LAK+DAT+E DLA+ Y ++G+PT+ F +G
Sbjct: 129 GACQALTPEYAAAATEL---KGLAALAKIDATEEGDLAQKYEIQGFPTVFLFVDGEMRKT 185
Query: 432 YSGGRQADDIISWLKKKTGPPAVEVT 509
Y G R D I++WLKKK P +T
Sbjct: 186 YEGERTKDGIVTWLKKKASPSIHNIT 211
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 163 EENVLVLSKANFETVITTTEYILVEFYAPW 252
E++V VL+K NF + + +VEFYAPW
Sbjct: 98 EKDVAVLTKDNFTEFVGNNSFAMVEFYAPW 127
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS---- 422
GHC+S P Y K L +S + +AK+D T + G+PT+ FF G+
Sbjct: 468 GHCQSFEPIYNKLGKYLKGIDS-LVVAKMDGTSNEHPRAK--ADGFPTILFFPGGNKSFD 524
Query: 423 PIDYSGGRQADDIISWLKKKTGPP 494
PI R ++ +LKK P
Sbjct: 525 PIAVDVDRTVVELYKFLKKHASIP 548
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = +3
Query: 270 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 449
L P +A+AAT L E S + +AK+D + +A ++G+PTL F NG+ + Y+GG
Sbjct: 112 LMPRFAEAATALKEIGSSVLMAKIDGDRYSKIASELEIKGFPTLLLFVNGTSLTYNGGSS 171
Query: 450 ADDIISWLKKKTGPPAVEVTLLN 518
A+DI+ W++KKTG P + + ++
Sbjct: 172 AEDIVIWVQKKTGAPIITLNTVD 194
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/79 (36%), Positives = 50/79 (63%)
Frame = +3
Query: 270 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 449
L P +A+AAT L E S + +AK+D + +A ++G+PTL F NG+ Y+GG
Sbjct: 110 LMPRFAEAATDLKEIGSSVLMAKIDGERYSKVASQLEIKGFPTLLLFVNGTSQSYTGGFS 169
Query: 450 ADDIISWLKKKTGPPAVEV 506
+++I+ W++KKTG +++
Sbjct: 170 SEEIVIWVQKKTGASTIKL 188
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
GHCK L PE AA LA+ + PI +AK++A + LA + +PTL + +G P++Y
Sbjct: 62 GHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLMLYNHGVPMEY 121
Query: 435 SGGRQADDIISWLKKKTGP 491
G R+AD ++ +LKK P
Sbjct: 122 YGPRKADLLVRYLKKFVAP 140
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 148 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPW 252
D+ + VL L+ +NF++ I+T + I V+FYAPW
Sbjct: 26 DQFTLDGTVLELTDSNFDSAISTFDCIFVDFYAPW 60
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-SPID 431
GHCK+L P + K A L + +A +DA Q A+ YG++G+PT+K F G +PID
Sbjct: 61 GHCKALTPTWEKVANIL---KGVATVAAIDADAHQSAAQDYGIKGFPTIKVFVPGKAPID 117
Query: 432 YSGGRQADDIISWLKKKTGPPAVEVTLLNRLKNLSMP 542
Y G R A I ++ K+ ++ L +RL+ S P
Sbjct: 118 YQGARDAKSIANFAYKQ-----IKGLLSDRLEGKSKP 149
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF--RNGSPI 428
GHCK LAPE+ +AA L + +KL V+ EQ + + V+G+PT+ F SP
Sbjct: 193 GHCKKLAPEWKRAAKNL---QGKVKLGHVNCDVEQSIMSRFKVQGFPTILVFGPDKSSPY 249
Query: 429 DYSGGRQADDIISWLKK--KTGPPAVEVTLL 515
Y G R A I S+ + ++ VEVT L
Sbjct: 250 PYEGARSASAIESFASELVESSAGPVEVTEL 280
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +1
Query: 172 VLVLSKANFET-VITTTEYILVEFYAPW 252
V+ L+ +NF++ V+ + +LVEF+APW
Sbjct: 32 VVQLTASNFKSKVLNSNGVVLVEFFAPW 59
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 181 LSKANFET-VITTTEYILVEFYAPW 252
L+ +NF+ VI + E +VEF+APW
Sbjct: 167 LNASNFDDLVIESNELWIVEFFAPW 191
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS-PID 431
GHC+SL P + K A+ L + +A +DA + +++ YGVRG+PT+K F G PID
Sbjct: 59 GHCQSLTPTWEKVASTL---KGIATVAAIDADAHKSVSQDYGVRGFPTIKVFVPGKPPID 115
Query: 432 YSGGRQADDIISWLKKK 482
Y G R A I + K+
Sbjct: 116 YQGARDAKSISQFAIKQ 132
Score = 58.4 bits (135), Expect = 4e-09
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN--GSPI 428
GHCK LAPE+ KAA L + +KL V+ EQ + + V+G+PT+ F + SP+
Sbjct: 194 GHCKKLAPEWKKAANNL---KGKVKLGHVNCDAEQSIKSRFKVQGFPTILVFGSDKSSPV 250
Query: 429 DYSGGRQADDIISW----LKKKTGPPAV 500
Y G R A I S+ L+ GP V
Sbjct: 251 PYEGARSASAIESFALEQLESNAGPAEV 278
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +1
Query: 172 VLVLSKANFET-VITTTEYILVEFYAPW 252
VL L+ +NF++ V+ + +LVEF+APW
Sbjct: 30 VLQLTPSNFKSKVLNSNGVVLVEFFAPW 57
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/25 (40%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 181 LSKANFETVITTTEYI-LVEFYAPW 252
L+ +NF+ ++T ++ + +VEF+APW
Sbjct: 168 LNSSNFDELVTESKELWIVEFFAPW 192
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESP-----IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
C L P + KAA ++ E P + LAKVD TQE DL ++GYP+++ FR GS
Sbjct: 173 CNLLKPSWEKAAKQIKERYDPEMDGRVILAKVDCTQEGDLCRRNHIQGYPSIRIFRKGSD 232
Query: 426 I 428
+
Sbjct: 233 L 233
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 145 GDEVPTE--ENVLVLSKANFETVITTTEYILVEFYAPWWATANL 270
GDE E E+ + L+ NF+T ++V FYAPW NL
Sbjct: 132 GDETGEEIVEDSVPLTGRNFDTFTHQFPILVVNFYAPWCYWCNL 175
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 246 SMVGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
S G C+ +AP +A A KL + KVD + + +A + ++ PT F + G
Sbjct: 38 SWCGPCRFIAPFFADLAKKLPN----VLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKI 93
Query: 426 IDYSGGRQADDIISWLKK 479
+D G + D++ S + K
Sbjct: 94 LDKVVGAKKDELQSTIAK 111
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSG 440
C+ +AP + A K S KVD + Q +A+ +GV PT F + G +D
Sbjct: 43 CRMIAPIFNDLAKKFM---SSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLV 99
Query: 441 GRQADDIISWLKKKTG 488
G +D+ + + K TG
Sbjct: 100 GANKEDLQAKIVKHTG 115
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Frame = +3
Query: 270 LAPEYAKAATKLAEEESP-----IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI-- 428
L P + KA+ E +P + L VD T+E L +S ++GYP+++ FR GS +
Sbjct: 177 LKPSWVKASQITRERYNPGTDDRVLLGSVDCTEEPTLCKSNHIQGYPSIRIFRRGSGLRE 236
Query: 429 --------DYSGGRQADDIISWLKKKTGP 491
Y G R D ++ +++ P
Sbjct: 237 DHGNHEHESYYGDRDTDSLVKMVEELLKP 265
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Frame = +3
Query: 270 LAPEYAKAATKLAEEESP-----IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI-- 428
L P + KAA + + P + L VD T+E L + ++GYP+++ FR GS +
Sbjct: 176 LKPSWEKAANIIKQRYDPEADGRVLLGNVDCTEEPALCKRNHIQGYPSIRIFRKGSDLRE 235
Query: 429 --------DYSGGRQADDIISWLKKKTGP 491
Y G R D I+ ++ P
Sbjct: 236 DHGHHEHESYYGDRDTDSIVKMVEGLVAP 264
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 431
G C+ ++P Y+ AT + S + KVD + D+A S+ + PT F R+G +D
Sbjct: 305 GPCRYMSPLYSNLAT----QHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVD 359
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSG 440
C+ +AP +A+ A K + K+D + Q +A+ + V PT F + G+ ID
Sbjct: 42 CRFIAPVFAEMAKKFTN----VVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVV 97
Query: 441 GRQADDIISWLKKKTG 488
G D+I L K G
Sbjct: 98 GAAKDEINEKLMKHGG 113
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPID 431
G CK +AP+Y KA L+E+ + K+D + + LA+ G+R PT K ++ +
Sbjct: 100 GPCKVIAPKY-KA---LSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVK 155
Query: 432 YSGGRQADDIIS 467
G + DD+++
Sbjct: 156 EVTGAKYDDLVA 167
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPID 431
G CK +AP+Y + L+E+ + K+D Q+ + LA+ G+R PT K ++ +
Sbjct: 110 GPCKVIAPKYKE----LSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVK 165
Query: 432 YSGGRQADDIIS 467
G + +D+++
Sbjct: 166 EVTGAKYEDLLA 177
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID-Y 434
HCK L + K E + I++ +VD + + + YPT F NG + Y
Sbjct: 57 HCKKLGNLWEDLG-KAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKY 115
Query: 435 SGGRQADDIISWLKKKTGPPAVEVTL 512
G R + + +++ ++T A + L
Sbjct: 116 KGKRDVESLKAFVVEETEKAAEKAQL 141
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID-Y 434
HCK L + K E + I++ +VD + + + YPT F NG + Y
Sbjct: 57 HCKKLGNLWEDLG-KAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKY 115
Query: 435 SGGRQADDIISWLKKKTGPPAVEVTL 512
G R + + +++ ++T A + L
Sbjct: 116 KGKRDVESLKAFVVEETEKAAEKAQL 141
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 HCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID-Y 434
HCK L + K E + I++ +VD + + + YPT F NG + Y
Sbjct: 57 HCKKLGNLWEDLG-KAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFYNGEEVSKY 115
Query: 435 SGGRQADDIISWLKKKTGPPAVEVTL 512
G R + + +++ ++T A + L
Sbjct: 116 KGKRDVESLKAFVVEETEKAAEKAQL 141
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 428
G CK +AP + + L+E+ S + VD + D + S+ ++ PT F +NG I
Sbjct: 58 GPCKIVAPFFIE----LSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQI 111
>At1g34780.1 68414.m04329 protein disulfide isomerase-related
contains weak similarity to Pfam:P08003 protein
disulfide isomerase A4 precursor (Protein ERp-72, ERp72)
[Mus musculus]
Length = 310
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 375 YGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTLLNRLKNLSMPIL 548
YGV G+PTL + Y G R D ++++ TG ++ T L R ++S+P L
Sbjct: 131 YGVHGFPTLLLLNSTMRARYRGTRMLDSLVAFYSDVTGIETLDKTSLER--SVSVPHL 186
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAK---VDATQEQ-DLAESYGVRGYPTLKFFRNGS 422
G CK + ++K + ++E+P+ K VD EQ ++AE ++ P F++NG
Sbjct: 133 GSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGV 192
Query: 423 PIDYSGGRQADDIISWLKKKT 485
++ R + I + + K T
Sbjct: 193 LLESFATRDKERIDAAILKYT 213
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAK---VDATQEQ-DLAESYGVRGYPTLKFFRNGS 422
G CK + ++K + ++E+P+ K VD EQ ++AE ++ P F++NG
Sbjct: 120 GSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGV 179
Query: 423 PIDYSGGRQADDIISWLKKKT 485
++ R + I + + K T
Sbjct: 180 LLESFATRDKERIDAAILKYT 200
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSG 440
C+ +AP +A LA++ + KVD + +AE + V+ PT F + G +
Sbjct: 42 CRFIAPVFAD----LAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVV 97
Query: 441 GRQADDIISWLKK 479
G ++II+ L+K
Sbjct: 98 GAAKEEIIANLEK 110
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID- 431
G C+ + P + + L ++ I++ K+D + +A Y + PT F++G P D
Sbjct: 94 GPCQFMVPILNEVSETLKDK---IQVVKIDTEKYPSIANKYKIEALPTFILFKDGEPCDR 150
Query: 432 YSGGRQADDII 464
+ G A +I
Sbjct: 151 FEGALTAKQLI 161
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDY 434
G CK + P + A K A + K K++ + YGVR PT+ F NG D
Sbjct: 105 GPCKMIDPIVNELAQKYAGQ---FKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDT 161
Query: 435 SGGRQADDIIS 467
G + D ++
Sbjct: 162 IIGAVSKDTLA 172
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +3
Query: 246 SMVGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
S G C+ + P A +A++ + + K+D + D+A+ + V PT + G
Sbjct: 57 SWCGPCRMIEP----AIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKE 112
Query: 426 IDYSGGRQADDI 461
I+ G + D++
Sbjct: 113 IERIIGAKKDEL 124
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 336 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 488
+V+A + +++E+Y V P FF++G +D G + + + K G
Sbjct: 57 RVEAEEHPEISEAYSVAAVPYFVFFKDGKTVDTLEGADPSSLANKVGKVAG 107
>At4g08930.1 68417.m01470 thioredoxin-related contains weak
similarity to Swiss-Prot:Q39239 thioredoxin H-type 4
(TRX-H-4). [Mouse-ear cress]
Length = 295
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 375 YGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 488
YGV G+PT+ + + Y G R D ++++ TG
Sbjct: 124 YGVHGFPTIILMNSTMLVVYRGSRTLDSLVAFYTDVTG 161
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 431
G C+ + P + A A + K K++ + + A YG+R PT+ F+ G D
Sbjct: 117 GPCRMIHPIVDQLAKDFAGK---FKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKD 172
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 30.7 bits (66), Expect = 0.95
Identities = 22/57 (38%), Positives = 26/57 (45%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 425
G C +A E A E ES + KVD E + A VRG PTL FF + P
Sbjct: 107 GPCILMAQELEMLAV---EYESNAIIVKVDTDDEYEFARDMQVRGLPTL-FFISPDP 159
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 336 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 488
+V+A + +++E+Y V P FF++G +D G + + + K G
Sbjct: 57 RVEAEEHPEISEAYSVALVPYFVFFKDGKTVDTLEGADPSSLANKVGKVAG 107
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGS-PIDY 434
C+++ Y + A KLA + + D Q++ + + +PT+ F +N S PI Y
Sbjct: 388 CQAMEASYDELADKLAGSGIKVAKFRADGDQKEFAKQELQLGSFPTILVFPKNSSRPIKY 447
Query: 435 -SGGRQADDIISWL 473
S R + + S+L
Sbjct: 448 PSEKRDVESLTSFL 461
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP--IDY 434
C+++ Y + A KLA + + + D Q++ + + +PT+ F +P I Y
Sbjct: 377 CQAMEASYIELAEKLAGKGVKVAKFRADGEQKEFAKQELQLGSFPTILLFPKRAPRAIKY 436
Query: 435 -SGGRQADDIISWL 473
S R D ++S++
Sbjct: 437 PSEHRDVDSLMSFV 450
>At1g59990.1 68414.m06758 DEAD/DEAH box helicase, putative (RH22)
similar to RNA helicase GI:3776015 from [Arabidopsis
thaliana]; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00270: DEAD/DEAH box
helicase; matches EST OAO811-2
Length = 581
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 253 WATANLWHRNTPRQQQSW 306
W + N HRN+PR +Q W
Sbjct: 383 WVSGNFLHRNSPRLKQKW 400
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 261 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 428
CK ++P T+ I KVD + + + VR PT+K ++NGS +
Sbjct: 628 CKQISPFVDSLCTRYPS----IHFLKVDIDKCPSIGNAENVRVVPTVKIYKNGSRV 679
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID- 431
G C+ + P + + L + I + K+D + LA Y + PT F++G D
Sbjct: 89 GPCQLMVPILNEVSETLKDI---IAVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDR 145
Query: 432 YSGGRQADDII 464
+ G A+ ++
Sbjct: 146 FEGALPANQLV 156
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 339 VDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDI 461
VD + +++A V+ PT F ++G+ +D G D+I
Sbjct: 61 VDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEI 101
>At4g31070.1 68417.m04411 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 613
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +3
Query: 222 VHFS*ILCSMVGHC---KSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGY 392
VH + C + H +L YAK + A E +L + D + +YG+ G+
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGH 434
Query: 393 --PTLKFFRNGSPIDYSGGRQADDI 461
L+ F+ GG + DD+
Sbjct: 435 GSEALEIFKG----MIKGGHEVDDM 455
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 255 GHCKSLAPEYAKAATKLAEEES-PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPID 431
G CK + P LA+ + IK K++ + + YGVR PT+ F G D
Sbjct: 111 GPCKMIDP----LVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKD 166
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 339 VDATQEQDLAESYGVRGYPTLKFFRNGSPI 428
VD + LA++ +R PT K ++NG +
Sbjct: 642 VDVEESMALAKAESIRKVPTFKMYKNGDKV 671
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,245,992
Number of Sequences: 28952
Number of extensions: 277746
Number of successful extensions: 886
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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