Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1643
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   3.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   7.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.5  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.5  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   9.5  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +3

Query: 231 VFYFFIIFPSLQY*SYVLISNMSHLI*YYKFSYLAIVKI*QCNIEFVSLSA 383
           +FY F+ + ++   + V+    ++L+ Y K+S L ++KI      F+ LS+
Sbjct: 264 LFYEFLPYLAIVCMNLVVPQLFNYLVQYEKYSPLFVIKISLFRTVFLRLSS 314


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 281 HIRLVLKRREYNKKIKHVI 225
           H  ++LKR+EY +K K+ +
Sbjct: 870 HEEMLLKRQEYKEKTKNAL 888


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 379 RLEGLIGCMINQCDLCSR*VT 441
           RL G  GC +++C LC + VT
Sbjct: 492 RLSG--GCNLHRCKLCGKVVT 510


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 141 VESTCFSISICHCASYVSEALFLLG 67
           V  T FS+ + H  +  SEA+ LLG
Sbjct: 271 VSQTVFSLLVGHVITKTSEAVPLLG 295


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 192 IHGSVCVLEYIQCFGYGVESTCFSISICHC-ASYVS 88
           +H S  V+E +  FG  + + CF+ ++    AS VS
Sbjct: 484 LHNSFQVMELVSVFGPLIYAGCFAATLSSALASLVS 519


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,920
Number of Sequences: 2352
Number of extensions: 13374
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)