Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1642
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    42   1e-05
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          27   0.70 
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   1.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   3.7  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 42.3 bits (95), Expect = 1e-05
 Identities = 24/64 (37%), Positives = 34/64 (53%)
 Frame = +3

Query: 471 RTITETVYCRNTSSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGRTQRLPA 650
           R I + + C  T  C+ GGLE AL C  R+  +++  GF      + L+ GG  T RLPA
Sbjct: 136 RMIRKPLVCAITGYCVAGGLELALMCDLRVMEENAVLGFFNRRFGVPLIDGG--TVRLPA 193

Query: 651 LTSI 662
           L  +
Sbjct: 194 LIGL 197


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +1

Query: 586 LDYQKSCWDFCPAVDGHSDYLLSP 657
           L YQK C    P   GHS   LSP
Sbjct: 163 LQYQKICGSNIPQASGHSKNSLSP 186


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = +1

Query: 328 SGIEAAVIISGKPGCFIAGADIS-MIENCKTKEEVVS--LSKRGHEIFRRIEQ 477
           +G  + ++ + K G ++AGADI  MI + K+K   V+  + ++   I+  ++Q
Sbjct: 226 AGSGSLLVAAAKFGAYVAGADIDYMIVHGKSKPTRVNQKVREKDESIYANLQQ 278


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 551 ISHCCERLQNRIWTTRSHAGTFARRWT 631
           ++  C+   +R++ T+ H G  A  WT
Sbjct: 279 LTSVCDETMSRVFPTQDHTGRPAYWWT 305


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,153
Number of Sequences: 2352
Number of extensions: 14200
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)