Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1639X
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    24   3.0  
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           23   6.9  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           23   6.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.9  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   9.1  

>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 35  IAILLLGLVLANSGGARELTYPYGRTGNSPLDYQ*IDRETHK 160
           I +LL GLV   SG     +Y   +TG+ P   Q I     K
Sbjct: 6   IFVLLAGLVALGSGIKLPASYSQCKTGDEPCVVQAITNTFQK 47


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 520 GTVSEVLHACHVDSAYERQQPLTTRRALV 434
           GT+ + +    + +A E Q PL   RA+V
Sbjct: 410 GTLKQAVGQIELQNATEEQSPLQLLRAIV 438


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 520 GTVSEVLHACHVDSAYERQQPLTTRRALV 434
           GT+ + +    + +A E Q PL   RA+V
Sbjct: 410 GTLKQAVGQIELQNATEEQSPLQLLRAIV 438


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 253 LKSYDVQNVYKYEYFK 206
           LK YD   V K EYFK
Sbjct: 196 LKRYDNSKVLKREYFK 211


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 14  VEDFANEIAILLLGLVLANSGGARELTYPYGR 109
           VEDFA +IA L   +VL   G    L   Y R
Sbjct: 640 VEDFALDIACLFALIVLFRLGALLCLWLRYAR 671


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,543
Number of Sequences: 2352
Number of extensions: 9105
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)