Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1638
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   4.3  
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    24   4.3  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   5.7  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 254 ILKSYDVQNVYKYEYFK 204
           +LK YD   V K EYFK
Sbjct: 195 LLKRYDNSKVLKREYFK 211


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 461 AVAHMRCQRDRREELRIPYRIPL 529
           A +H RC ++   ELR+P  + L
Sbjct: 123 AYSHHRCWKETEPELRLPVAVCL 145


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 449 WSMVAVAHMRCQRDRREE 502
           WSM +   +RC R RR E
Sbjct: 26  WSMASNRTVRCPRTRRSE 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,414
Number of Sequences: 2352
Number of extensions: 9337
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)