Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1637
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.2  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   9.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   9.0  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   9.0  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/43 (20%), Positives = 21/43 (48%)
 Frame = -2

Query: 187 MYYDFVEHYYLQIVSRQHIIMSNYYIYVAISVPLLTKIKQHQI 59
           +YY  V  Y   I+   H I   +Y+ +   + + ++ ++ Q+
Sbjct: 270 LYYPHVPEYSSSIIMELHNIEGTHYVKIVYYLGIPSEARELQL 312


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/43 (20%), Positives = 21/43 (48%)
 Frame = -2

Query: 187 MYYDFVEHYYLQIVSRQHIIMSNYYIYVAISVPLLTKIKQHQI 59
           +YY  V  Y   I+   H I   +Y+ +   + + ++ ++ Q+
Sbjct: 285 LYYPHVPEYSSSIIMELHNIEGTHYVKIVYYLGIPSEARELQL 327


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 640 FSNESVPNMSIVLFKNVMTIQSIR 711
           F N  +PN+ I +F N   + SIR
Sbjct: 130 FHNIIMPNVYIRIFPNGSVLYSIR 153


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 640 FSNESVPNMSIVLFKNVMTIQSIR 711
           F N  +PN+ I +F N   + SIR
Sbjct: 130 FHNIIMPNVYIRIFPNGSVLYSIR 153


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 224 AKTIDDRFCMYNNVLRLC 171
           AK +++RF ++  V R+C
Sbjct: 313 AKNMENRFPLFTTVHRIC 330


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,317
Number of Sequences: 438
Number of extensions: 4255
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)