Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1635
         (769 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9BMN0 Cluster: JH-inducible protein; n=1; Galleria mel...    77   5e-13
UniRef50_UPI0000D555A2 Cluster: PREDICTED: similar to CG13315-PA...    46   8e-04
UniRef50_Q9VSU3 Cluster: CG13315-PA; n=3; Sophophora|Rep: CG1331...    46   0.001
UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin al...    37   0.63 
UniRef50_Q4Q0H9 Cluster: Mkiaa0324 protein-like protein; n=3; Le...    34   3.4  
UniRef50_Q5FGD1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_A1WZD9 Cluster: Major facilitator superfamily MFS_1; n=...    33   7.8  

>UniRef50_Q9BMN0 Cluster: JH-inducible protein; n=1; Galleria
           mellonella|Rep: JH-inducible protein - Galleria
           mellonella (Wax moth)
          Length = 78

 Score = 77.0 bits (181), Expect = 5e-13
 Identities = 40/65 (61%), Positives = 43/65 (66%)
 Frame = +3

Query: 33  MDKRKLIGSATRYIAGRHAVQTVYWRRSAXXXXXXXXXXXXXXXXXXXXPNKVDSAEMFA 212
           MDKR+LIGSATRYIAGRHAVQTVYWR+SA                    PN+VD AEMF 
Sbjct: 1   MDKRQLIGSATRYIAGRHAVQTVYWRKSA-AANKGLLKTKTTFFGKNEGPNRVDPAEMFT 59

Query: 213 RVRER 227
           RVRER
Sbjct: 60  RVRER 64


>UniRef50_UPI0000D555A2 Cluster: PREDICTED: similar to CG13315-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG13315-PA - Tribolium castaneum
          Length = 65

 Score = 46.4 bits (105), Expect = 8e-04
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = +3

Query: 33  MDKRKLIGSATRYIAGRHAVQTVYWR 110
           M  + L+G+ATRYIAGR+AVQTVYWR
Sbjct: 1   MQGKNLVGAATRYIAGRNAVQTVYWR 26


>UniRef50_Q9VSU3 Cluster: CG13315-PA; n=3; Sophophora|Rep:
           CG13315-PA - Drosophila melanogaster (Fruit fly)
          Length = 69

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 48  LIGSATRYIAGRHAVQTVYWRRSA 119
           LIG+ TRYIAGR+AVQTVYWR SA
Sbjct: 9   LIGATTRYIAGRNAVQTVYWRTSA 32


>UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin
           alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
           M-alpha-6); n=1; Apis mellifera|Rep: PREDICTED: similar
           to Tubulin alpha-6 chain (Alpha-tubulin 6)
           (Alpha-tubulin isotype M-alpha-6) - Apis mellifera
          Length = 542

 Score = 36.7 bits (81), Expect = 0.63
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +3

Query: 48  LIGSATRYIAGRHAVQTVYWRRSA 119
           LIG A  Y+AG+ AV+TVYWR ++
Sbjct: 473 LIGGAVSYVAGKQAVRTVYWRTAS 496


>UniRef50_Q4Q0H9 Cluster: Mkiaa0324 protein-like protein; n=3;
           Leishmania|Rep: Mkiaa0324 protein-like protein -
           Leishmania major
          Length = 500

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
 Frame = +1

Query: 10  TGRISRTKWTKES*LAALRDTSPAVTRSKRYTGADRRKTAR---AC*RPPKRPSSAKTRV 180
           TGR  +   +++  + A R       R  R   A + K AR   A  R PKRP+S K R 
Sbjct: 208 TGRSRKAAKSRKPPVTAARAKKAQAARPSRSAAAQKLKRARRMRAARRVPKRPASVKVRR 267

Query: 181 QTKLTRPRCSQGSV-KDTPKYSEPNNIKKAVIVQ 279
              L   R S  +V    PK    +  +KA  ++
Sbjct: 268 ARHLAAKRSSPKTVTASKPKARTTHAARKAAALK 301


>UniRef50_Q5FGD1 Cluster: Putative uncharacterized protein; n=1;
           Ehrlichia ruminantium str. Gardel|Rep: Putative
           uncharacterized protein - Ehrlichia ruminantium (strain
           Gardel)
          Length = 68

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -3

Query: 590 KCEPREFVSPNLTY*AT--YDSTFIVQRHDRFFKFN*KTM*VITMHTALYIRKKKNVA*K 417
           +C  + F+  NL +  T  Y+ TFI+++H+  FK + +    I   T L++R ++ +   
Sbjct: 2   QCHSKTFLIKNLIHKPTPQYNITFIIEKHNNVFKLDYRYSHKILYTTFLHVRHEQQLG-- 59

Query: 416 YSKLFLI 396
           Y+ +F I
Sbjct: 60  YNVIFFI 66


>UniRef50_A1WZD9 Cluster: Major facilitator superfamily MFS_1; n=2;
           Ectothiorhodospiraceae|Rep: Major facilitator
           superfamily MFS_1 - Halorhodospira halophila (strain DSM
           244 / SL1) (Ectothiorhodospirahalophila (strain DSM 244
           / SL1))
          Length = 468

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = -3

Query: 287 REN*TITAFLMLLGSEYLGVSFTDPCEHLGRVNFVWTLVFAEEGRFGGLQQALAV 123
           R +  + A L++ GS  LG++ TDP EHLG V      VFA    FG   Q +A+
Sbjct: 96  RRSWMLLAQLLVAGS-LLGMALTDPTEHLGLV-----AVFAVAAAFGSATQDVAI 144


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,084,565
Number of Sequences: 1657284
Number of extensions: 15557975
Number of successful extensions: 34782
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34762
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)