Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1634
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           27   0.77 
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           27   0.77 
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           26   1.0  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   2.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   3.1  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   7.2  

>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 550 PSCKTAVSVDPSDTTSSHIQYITT 479
           P+  T V +DP+ TT++H+   TT
Sbjct: 214 PTTTTTVWIDPTATTTTHVPTTTT 237


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 550 PSCKTAVSVDPSDTTSSHIQYITT 479
           P+  T V +DP+ TT++H+   TT
Sbjct: 215 PTTTTTVWIDPTATTTTHVPTTTT 238


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 550 PSCKTAVSVDPSDTTSSHIQYITT 479
           P+  T V +DP+ TT++H+   TT
Sbjct: 215 PTTTTTVWIDPTATTTTHVPPTTT 238


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 233 KIFDGCLISLKTFSR*V*VYTSYEPQHADRRSTE 334
           KI+  C  S+ TF   + V+T+Y    A R STE
Sbjct: 146 KIYCCCHFSMATFFWFMPVWTTYSAYFAVRNSTE 179


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 433 FVCKYNNIKKS*QYCVSLCIVCD--CLSCRLDLRKQ 534
           F+CKY+       +C +LC  CD     C+++  KQ
Sbjct: 732 FLCKYDT------HCFALCHCCDFYACDCKMECPKQ 761


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -3

Query: 438 YEWNILRGERLFGLS-DNY 385
           +EWN+L G  LF L  D+Y
Sbjct: 70  FEWNVLFGMLLFSLKLDDY 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,525
Number of Sequences: 2352
Number of extensions: 13741
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)