Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1632
         (795 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NG98 Cluster: ENSANGP00000030067; n=2; Eumetazoa|Rep:...    37   0.67 
UniRef50_Q9K5X6 Cluster: BH3961 protein; n=2; Bacillus haloduran...    34   4.7  
UniRef50_UPI00004988DA Cluster: BspA-related protein; n=1; Entam...    33   8.3  

>UniRef50_A0NG98 Cluster: ENSANGP00000030067; n=2; Eumetazoa|Rep:
           ENSANGP00000030067 - Anopheles gambiae str. PEST
          Length = 136

 Score = 36.7 bits (81), Expect = 0.67
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 411 YMYLHICIFIYLFIC-FTQEI*C-FNILAICLFNIKYI 518
           ++YL IC+F+YLFIC F     C F  L ICLF   +I
Sbjct: 43  FVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFI 80



 Score = 36.7 bits (81), Expect = 0.67
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 411 YMYLHICIFIYLFIC-FTQEI*C-FNILAICLFNIKYI 518
           ++YL IC+F+YLFIC F     C F  L ICLF   +I
Sbjct: 51  FVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFI 88



 Score = 36.7 bits (81), Expect = 0.67
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 411 YMYLHICIFIYLFIC-FTQEI*C-FNILAICLFNIKYI 518
           ++YL IC+F+YLFIC F     C F  L ICLF   +I
Sbjct: 59  FVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFI 96



 Score = 36.7 bits (81), Expect = 0.67
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 411 YMYLHICIFIYLFIC-FTQEI*C-FNILAICLFNIKYI 518
           ++YL IC+F+YLFIC F     C F  L ICLF   +I
Sbjct: 67  FVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFI 104



 Score = 36.7 bits (81), Expect = 0.67
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 411 YMYLHICIFIYLFIC-FTQEI*C-FNILAICLFNIKYI 518
           ++YL IC+F+YLFIC F     C F  L ICLF   +I
Sbjct: 75  FVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFI 112



 Score = 36.7 bits (81), Expect = 0.67
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 411 YMYLHICIFIYLFIC-FTQEI*C-FNILAICLFNIKYI 518
           ++YL IC+F+YLFIC F     C F  L ICLF   +I
Sbjct: 83  FVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFI 120



 Score = 36.7 bits (81), Expect = 0.67
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 411 YMYLHICIFIYLFIC-FTQEI*C-FNILAICLFNIKYI 518
           ++YL IC+F+YLFIC F     C F  L ICLF   +I
Sbjct: 91  FVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFI 128



 Score = 36.7 bits (81), Expect = 0.67
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +3

Query: 411 YMYLHICIFIYLFIC-FTQEI*C-FNILAICLFNIKYI 518
           ++YL IC+F+YLFIC F     C F  L ICLF   +I
Sbjct: 99  FVYLFICLFVYLFICLFVYLFICLFVYLFICLFVYLFI 136


>UniRef50_Q9K5X6 Cluster: BH3961 protein; n=2; Bacillus
           halodurans|Rep: BH3961 protein - Bacillus halodurans
          Length = 295

 Score = 33.9 bits (74), Expect = 4.7
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 547 EPKPSNVY*RGPFILRL-NPTKINGILQNNRESIILAY 657
           EP+  +VY RG F+  + NPTK+ G L N+  +  L Y
Sbjct: 151 EPRAGDVYERGDFLFEIVNPTKLTGDLNNDSIAFRLTY 188


>UniRef50_UPI00004988DA Cluster: BspA-related protein; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: BspA-related
           protein - Entamoeba histolytica HM-1:IMSS
          Length = 1105

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
 Frame = -3

Query: 421 RYIYLSFN*-FESNHLTYQTRHFHSLYYYFFQDYKNNNIAKKIRFFKRD-ISKGSGLKSK 248
           +++Y  F    +SNHL Y+ +++   YYY+ ++ KN      + + K+D I+ GS +  +
Sbjct: 59  QFLYYPFEEKIQSNHLLYRIKYYVP-YYYYLENKKNWIQCDNVMYTKKDFITFGSSIPKE 117

Query: 247 V 245
           V
Sbjct: 118 V 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,648,758
Number of Sequences: 1657284
Number of extensions: 11731560
Number of successful extensions: 25200
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24722
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)