Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1629
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 50 6e-06
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 50 6e-06
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 50 6e-06
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 50 6e-06
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 50 6e-06
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 50 6e-06
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 50 6e-06
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 41 0.005
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 50.4 bits (115), Expect = 6e-06
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 76 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 252
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 253 Q---SSTASRSI*KGRPSSPTTPIK 318
+ T ++ + P + T P K
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPAK 104
Score = 46.4 bits (105), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 QMLFS*IQTGR*RGEGQERAIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSV 374
Q +S ++ G+ + QE DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA-DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAPY 118
Query: 375 QVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA--KTASIISSRN 530
+LATDY NYA+ Y+C + H F WIL+RN L + +I++S N
Sbjct: 119 WILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 50.4 bits (115), Expect = 6e-06
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 76 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 252
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 253 Q---SSTASRSI*KGRPSSPTTPIK 318
+ T ++ + P + T P K
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPAK 104
Score = 46.4 bits (105), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 QMLFS*IQTGR*RGEGQERAIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSV 374
Q +S ++ G+ + QE DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA-DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAPY 118
Query: 375 QVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA--KTASIISSRN 530
+LATDY NYA+ Y+C + H F WIL+RN L + +I++S N
Sbjct: 119 WILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 50.4 bits (115), Expect = 6e-06
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 76 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 252
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 253 Q---SSTASRSI*KGRPSSPTTPIK 318
+ T ++ + P + T P K
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPAK 104
Score = 46.4 bits (105), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 QMLFS*IQTGR*RGEGQERAIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSV 374
Q +S ++ G+ + QE DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA-DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAPY 118
Query: 375 QVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA--KTASIISSRN 530
+LATDY NYA+ Y+C + H F WIL+RN L + +I++S N
Sbjct: 119 WILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 50.4 bits (115), Expect = 6e-06
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 76 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 252
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 253 Q---SSTASRSI*KGRPSSPTTPIK 318
+ T ++ + P + T P K
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPAK 104
Score = 46.4 bits (105), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 QMLFS*IQTGR*RGEGQERAIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSV 374
Q +S ++ G+ + QE DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA-DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAPY 118
Query: 375 QVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA--KTASIISSRN 530
+LATDY NYA+ Y+C + H F WIL+RN L + +I++S N
Sbjct: 119 WILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 50.4 bits (115), Expect = 6e-06
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 76 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 252
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 253 Q---SSTASRSI*KGRPSSPTTPIK 318
+ T ++ + P + T P K
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPAK 104
Score = 46.4 bits (105), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 QMLFS*IQTGR*RGEGQERAIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSV 374
Q +S ++ G+ + QE DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA-DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAPY 118
Query: 375 QVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA--KTASIISSRN 530
+LATDY NYA+ Y+C + H F WIL+RN L + +I++S N
Sbjct: 119 WILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 50.4 bits (115), Expect = 6e-06
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 76 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 252
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 253 Q---SSTASRSI*KGRPSSPTTPIK 318
+ T ++ + P + T P K
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPAK 104
Score = 46.4 bits (105), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 QMLFS*IQTGR*RGEGQERAIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSV 374
Q +S ++ G+ + QE DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA-DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAPY 118
Query: 375 QVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA--KTASIISSRN 530
+LATDY NYA+ Y+C + H F WIL+RN L + +I++S N
Sbjct: 119 WILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 50.4 bits (115), Expect = 6e-06
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 76 EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKNV 252
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLNQ 79
Query: 253 Q---SSTASRSI*KGRPSSPTTPIK 318
+ T ++ + P + T P K
Sbjct: 80 ELRADGTVNQIEGEATPVNLTEPAK 104
Score = 46.4 bits (105), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 QMLFS*IQTGR*RGEGQERAIIDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSV 374
Q +S ++ G+ + QE DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA-DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAPY 118
Query: 375 QVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA--KTASIISSRN 530
+LATDY NYA+ Y+C + H F WIL+RN L + +I++S N
Sbjct: 119 WILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 40.7 bits (91), Expect = 0.005
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 321 AKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDA 500
AKL V KF +LATDY NYA+ Y+C + H F WIL+RN L +
Sbjct: 12 AKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNLPPET 68
Query: 501 --KTASIISSRN 530
+I++S N
Sbjct: 69 VDSLKNILTSNN 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,146,667
Number of Sequences: 237096
Number of extensions: 1620852
Number of successful extensions: 3564
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3550
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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