Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1628
(742 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5P9D4 Cluster: Putative uncharacterized protein; n=2; ... 36 0.79
UniRef50_Q22L45 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_A0DBC2 Cluster: Chromosome undetermined scaffold_44, wh... 34 3.2
UniRef50_Q6YXP5 Cluster: Putative membrane protein ycf1; n=3; Em... 34 3.2
UniRef50_A0CF73 Cluster: Chromosome undetermined scaffold_174, w... 33 5.6
UniRef50_A2TX28 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q245C7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_A0DGE2 Cluster: Chromosome undetermined scaffold_5, who... 33 7.4
UniRef50_UPI00006CD5E1 Cluster: hypothetical protein TTHERM_0051... 33 9.7
UniRef50_UPI00006CB62E Cluster: hypothetical protein TTHERM_0044... 33 9.7
UniRef50_Q5BWT0 Cluster: SJCHGC09032 protein; n=1; Schistosoma j... 33 9.7
UniRef50_Q245W4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A7AMD0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_Q5P9D4 Cluster: Putative uncharacterized protein; n=2;
Anaplasma|Rep: Putative uncharacterized protein -
Anaplasma marginale (strain St. Maries)
Length = 293
Score = 36.3 bits (80), Expect = 0.79
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +1
Query: 238 VCQMPHFMKKINLFLEQVEQSYSMLMVKTPYNNVNMTMNLVRSKIEVISTLNDVNEIKIE 417
V +PH MK +NLF++ M +V Y + + + + E++ + D +++
Sbjct: 143 VMYVPHSMKAVNLFVKMQSSRVHMAIVLDEYGSTDGLVTMADIIEEIVGDIEDEHDVPSI 202
Query: 418 PLTARIENESKIEI 459
P I N+ KIE+
Sbjct: 203 PDIVNISND-KIEV 215
>UniRef50_Q22L45 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1574
Score = 34.3 bits (75), Expect = 3.2
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 274 LFLEQVEQSY--SMLMVKTPYNNVNMTMNLVRSKIEVISTLNDVNEIKIEPLTARIENE 444
LFL + Y S+ + +N N+T N + + I LND+ EIKI +I NE
Sbjct: 1228 LFLNNYIKKYQSSLKKINIEFNQNNITNNEIHILSKAIQNLNDLQEIKINLQNNKISNE 1286
>UniRef50_A0DBC2 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_44, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2045
Score = 34.3 bits (75), Expect = 3.2
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 244 QMPHFMKKINLFLEQVEQSYSML-MVKTPYNNVNMTMNLVRSKIEVISTLNDVNEIKIEP 420
Q+ + K+ + +Q+EQ S L ++ Y + +N + K + I +N NE+K++
Sbjct: 1420 QIEQYEKQSQNYTQQIEQLQSTLNQLQNEYQQLTSELNEEQLKNQKIIEINKENEVKVQL 1479
Query: 421 LTARIENESKIEIKLE 468
+ ++ S+ +KLE
Sbjct: 1480 IQQDYQHISQTLVKLE 1495
>UniRef50_Q6YXP5 Cluster: Putative membrane protein ycf1; n=3;
Embryophyta|Rep: Putative membrane protein ycf1 -
Physcomitrella patens (Moss)
Length = 1603
Score = 34.3 bits (75), Expect = 3.2
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 288 LLQKQIDLFHEMWHLTHTNRFCIFNFSLK*FSRN--IRCLHNRN 163
LL Q LFH++W + TN C F + LK ++ N I+ NRN
Sbjct: 1140 LLMSQAYLFHKIWQIEKTNNKCDFKYLLKNWTSNSVIKKKINRN 1183
>UniRef50_A0CF73 Cluster: Chromosome undetermined scaffold_174,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_174,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 864
Score = 33.5 bits (73), Expect = 5.6
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 259 MKKINLFLEQVEQSYSMLMVKTPYNN----VNMTMNLVRSKIEVIST-LNDVNEIKIEPL 423
MK + L E +++S M+K + N VN + R ++ +T + ++NEI+I+
Sbjct: 644 MKGLKLMAESIQESQQQ-MIKEDHQNQIKEVNQAVENTRQDVQQTNTNIKEMNEIQIQHK 702
Query: 424 TARIENESKIEIKLEDAHNI 483
+ EN++ IEI ++ I
Sbjct: 703 SILDENQTDIEILKKENETI 722
>UniRef50_A2TX28 Cluster: Putative uncharacterized protein; n=1;
Polaribacter dokdonensis MED152|Rep: Putative
uncharacterized protein - Polaribacter dokdonensis
MED152
Length = 259
Score = 33.1 bits (72), Expect = 7.4
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 253 HFMKKINLFLEQVE-QSYSMLMVKTPYNNVNMTMNLVRSKIEVIST-LNDVNEIKIEPLT 426
HF+++ NL E E Q Y + ++ P N + +T N +++KI VIS L +VNE L
Sbjct: 187 HFVEEENLLFEDKEAQKYILSELEKPNNRLALT-NAIKTKILVISDYLLNVNESL--NLV 243
Query: 427 ARIENESKIEIKL 465
++ NE EI+L
Sbjct: 244 DKMINEIDDEIEL 256
>UniRef50_Q245C7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1548
Score = 33.1 bits (72), Expect = 7.4
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 328 YNNVNMTMNLVRSKIEVISTLNDVNEIKIEPLTARIENESKIEIKLEDAHNISKADISTA 507
YNNV N + KI IS + NEI ++ ++ +++ ++++ + A I+
Sbjct: 792 YNNVEKENNFLYKKIVDISAKDVQNEITLKEQKYELKQNNQLLVRVKKRQQ-NSAKITEE 850
Query: 508 NYRVLMNLY 534
N R+ M LY
Sbjct: 851 NRRMFMKLY 859
>UniRef50_A0DGE2 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_5,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 649
Score = 33.1 bits (72), Expect = 7.4
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 265 KINLFLEQVEQSYSMLMVKTPYNNVNMTMNLVRSKIEVIS--TLNDVNEIKIEPLTARIE 438
+IN LEQ QS + K YNN+ ++ +R + + T +D+ +K E L R E
Sbjct: 403 QINRLLEQTSQSINQTTQKLDYNNLEEMISQIRQINQTFTGETQDDIKNLKTE-LNKRDE 461
Query: 439 NESKIEIKLEDAHN 480
++E + + N
Sbjct: 462 KIQQLEAQKQQYEN 475
>UniRef50_UPI00006CD5E1 Cluster: hypothetical protein
TTHERM_00519840; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00519840 - Tetrahymena
thermophila SB210
Length = 658
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 259 MKKINLFLEQVEQSYSMLMV---KTPYNNVNMTMNLVRSKIEVISTLNDVNEIK 411
+ +INLF E++E+ ++ K+ YN NL + +EV S + ++EIK
Sbjct: 93 LNQINLFYEELEKRLIQIVANAKKSAYNLAEQMQNLSTNAVEVYSQILKISEIK 146
>UniRef50_UPI00006CB62E Cluster: hypothetical protein
TTHERM_00444550; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00444550 - Tetrahymena
thermophila SB210
Length = 1105
Score = 32.7 bits (71), Expect = 9.7
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +1
Query: 262 KKINLFLEQVEQSYSMLMVKTPYNNVNMTMNLVRSKIEVISTLNDVNEIKIEPLTARIEN 441
+K+N +Q S S+ +VK N+ T S+ L ++NE +I P T RI+N
Sbjct: 179 QKLNEKQQQDLMSRSLYVVKNQPLNLLSTAQSDGSRSSG-QQLRNINEQQIIPATTRIQN 237
Query: 442 ESKIEI-KLEDAHNISKADISTANYRVLM 525
+ I I K ++ I+ D T L+
Sbjct: 238 QQSINISKFDEGIQINSQDQFTQKQNTLL 266
>UniRef50_Q5BWT0 Cluster: SJCHGC09032 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09032 protein - Schistosoma
japonicum (Blood fluke)
Length = 343
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -2
Query: 309 HGVALFHLLQKQIDLFHEMWHLTHTNRFCIFNFSLK*FSRNIRCLHNRNS 160
HG A+ HLL ++D +T++ R C+ +R+++CL N+NS
Sbjct: 296 HGPAILHLLNVRLDALLNSNKITNSLRCCVVK-----LNRSVKCLLNQNS 340
>UniRef50_Q245W4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 614
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 540 DHPEEIKVCEGIEDCFGAKLKTTYLSRTELEAERELAKRKANTQRNCTNVKMCGSYDND 716
D E+ + E E+ F +K +YL++ E+E E+E +K + R T+ K +YD+D
Sbjct: 160 DSKEKSDIDEFAEEDFNRIMKRSYLTQEEIEEEQE---KKKQSNRIYTDFKSDYNYDDD 215
>UniRef50_A7AMD0 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 1627
Score = 32.7 bits (71), Expect = 9.7
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = -2
Query: 276 QIDLFHEMWHLTHTNRFCIFNFSLK*FSRNI--RCLHNRNSINVLPSVK---QQKQTFAF 112
Q++ + E+ + T+R+ I +F ++ + I CL N PS+K Q T
Sbjct: 477 QVEFYREIAQVLDTSRYNIGSFYMERYLERILPMCLAIPNPDAWSPSIKSIMQSVDTLRL 536
Query: 111 GTRTSSSVKQ*VRSLKS 61
G+R+S SV +R LKS
Sbjct: 537 GSRSSGSVATLLRMLKS 553
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,399,119
Number of Sequences: 1657284
Number of extensions: 9966370
Number of successful extensions: 30517
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30502
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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