Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1627
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.     32   0.90 
AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related ...    32   0.90 
AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA...    32   0.90 
AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC...    29   6.4  
AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF...    29   6.4  

>AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.
          Length = 1678

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +2

Query: 11   DPLRRSGE---KLSGLCLRVNLLVEPFA-ASDGFDENSDRCLKYLKAPLVDR 154
            D  +R GE    ++ LC+   LL + +   +DG DE+SD CL+   AP  D+
Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449


>AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related
            protein LRP6 protein.
          Length = 1678

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +2

Query: 11   DPLRRSGE---KLSGLCLRVNLLVEPFA-ASDGFDENSDRCLKYLKAPLVDR 154
            D  +R GE    ++ LC+   LL + +   +DG DE+SD CL+   AP  D+
Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449


>AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA
            protein.
          Length = 1678

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +2

Query: 11   DPLRRSGE---KLSGLCLRVNLLVEPFA-ASDGFDENSDRCLKYLKAPLVDR 154
            D  +R GE    ++ LC+   LL + +   +DG DE+SD CL+   AP  D+
Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449


>AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC,
           isoform C protein.
          Length = 1509

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 68  LVEPFAASDGFDENSDRCLKYLKAPLVDREEENTINSHNQ 187
           L+E  AA D   E  DR  ++ K PL   E  +  +SH+Q
Sbjct: 58  LIEEAAAQDQSSEEQDRQHQHAKDPLAQTEMNHHPHSHHQ 97


>AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF,
           isoform F protein.
          Length = 1918

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 68  LVEPFAASDGFDENSDRCLKYLKAPLVDREEENTINSHNQ 187
           L+E  AA D   E  DR  ++ K PL   E  +  +SH+Q
Sbjct: 471 LIEEAAAQDQSSEEQDRQHQHAKDPLAQTEMNHHPHSHHQ 510


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,255,333
Number of Sequences: 53049
Number of extensions: 564557
Number of successful extensions: 1020
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)