BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1627 (721 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein. 32 0.90 AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related ... 32 0.90 AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA... 32 0.90 AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC... 29 6.4 AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF... 29 6.4 >AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein. Length = 1678 Score = 31.9 bits (69), Expect = 0.90 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +2 Query: 11 DPLRRSGE---KLSGLCLRVNLLVEPFA-ASDGFDENSDRCLKYLKAPLVDR 154 D +R GE ++ LC+ LL + + +DG DE+SD CL+ AP D+ Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449 >AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related protein LRP6 protein. Length = 1678 Score = 31.9 bits (69), Expect = 0.90 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +2 Query: 11 DPLRRSGE---KLSGLCLRVNLLVEPFA-ASDGFDENSDRCLKYLKAPLVDR 154 D +R GE ++ LC+ LL + + +DG DE+SD CL+ AP D+ Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449 >AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA protein. Length = 1678 Score = 31.9 bits (69), Expect = 0.90 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +2 Query: 11 DPLRRSGE---KLSGLCLRVNLLVEPFA-ASDGFDENSDRCLKYLKAPLVDR 154 D +R GE ++ LC+ LL + + +DG DE+SD CL+ AP D+ Sbjct: 1398 DCCKRPGEFQCPINKLCISAALLCDGWENCADGADESSDICLQRRMAPATDK 1449 >AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC, isoform C protein. Length = 1509 Score = 29.1 bits (62), Expect = 6.4 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 68 LVEPFAASDGFDENSDRCLKYLKAPLVDREEENTINSHNQ 187 L+E AA D E DR ++ K PL E + +SH+Q Sbjct: 58 LIEEAAAQDQSSEEQDRQHQHAKDPLAQTEMNHHPHSHHQ 97 >AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF, isoform F protein. Length = 1918 Score = 29.1 bits (62), Expect = 6.4 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 68 LVEPFAASDGFDENSDRCLKYLKAPLVDREEENTINSHNQ 187 L+E AA D E DR ++ K PL E + +SH+Q Sbjct: 471 LIEEAAAQDQSSEEQDRQHQHAKDPLAQTEMNHHPHSHHQ 510 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 29,255,333 Number of Sequences: 53049 Number of extensions: 564557 Number of successful extensions: 1020 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 988 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1020 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3211306956 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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