BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1625 (763 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485,115... 31 1.0 01_01_0558 + 4098383-4098510,4100462-4100572,4100765-4100853,410... 31 1.3 03_03_0164 - 14979364-14979479,14979613-14980102 30 1.7 10_08_0586 + 19005991-19006273,19006481-19006642,19006741-190067... 30 2.3 04_01_0253 - 3358090-3359052 30 2.3 10_02_0133 - 5661860-5662034,5662229-5662384,5663849-5663874 29 5.3 05_01_0211 + 1591733-1591891,1592761-1592813,1593024-1593240 29 5.3 12_01_0074 - 615794-615883,616186-616391,616524-616614 28 7.1 06_03_0340 + 19703574-19704329 28 7.1 01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 7.1 11_04_0382 - 17001848-17002237 28 9.3 >07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485, 1152244-1153646 Length = 922 Score = 31.1 bits (67), Expect = 1.0 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = -3 Query: 260 CPEHGQRVRVVAHLLLYHRVQVRAVRLEEVSEVSLLGQV 144 C HGQ+V +L H+V++ + LE + EVSLL QV Sbjct: 292 CKHHGQKVCGSGNL---HKVELTDISLEPIIEVSLLCQV 327 >01_01_0558 + 4098383-4098510,4100462-4100572,4100765-4100853, 4100974-4101107,4101337-4101435,4102619-4102994, 4103883-4104337,4104419-4107409 Length = 1460 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Frame = -1 Query: 337 PLVDALDARH----DQMAPLVDALDARHDLALNMGSVSASLHTSSCITVSRSAQFVLKKY 170 P ++ LD ++ DQ+ PL + N G +S I +S + VL++ Sbjct: 1115 PCLEMLDIQNCPSLDQLPPLPHSSTLSRISLKNAGIISLMELNDEEIVISGISDLVLERQ 1174 Query: 169 LKFPFLGR*SLKSLSVSG 116 L PF SLKS S+ G Sbjct: 1175 LFLPFHNLRSLKSFSIPG 1192 >03_03_0164 - 14979364-14979479,14979613-14980102 Length = 201 Score = 30.3 bits (65), Expect = 1.7 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = +1 Query: 247 PCSGQGHGARQERRLVAPSGHGARQERRLVAPSTHVKHARSNRN 378 P SGQ G E AP G G R RR P T RS+ N Sbjct: 115 PRSGQRGGEEGEVAAAAPGGGGRRWRRRRPPPPTAAAPLRSSPN 158 >10_08_0586 + 19005991-19006273,19006481-19006642,19006741-19006796, 19006899-19007061,19007753-19007859,19008879-19008945, 19009176-19009375 Length = 345 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = +2 Query: 134 LQGLPAQEGKLQILLQDELRGPGHGDTGGGVQ-----RRGHAAHVQGKVMARV 277 L +PAQ+ L+++L RG G G G G+ RRG H G R+ Sbjct: 45 LDEVPAQDDLLRVVLIVADRGGGGGGRGSGISRGVAIRRGRGGHRDGDARCRL 97 >04_01_0253 - 3358090-3359052 Length = 320 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +1 Query: 256 GQGHGARQERRLVAPSGHGARQERRLVAPSTHVKHARSNRNDS 384 G+G AR + P G AR+ERRL A + R S Sbjct: 208 GEGVAARPREKTARPDGARARRERRLEAAGAEKREGRRRERAS 250 >10_02_0133 - 5661860-5662034,5662229-5662384,5663849-5663874 Length = 118 Score = 28.7 bits (61), Expect = 5.3 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -3 Query: 167 EVSLLGQVVLEEFECERRGGHLEAVGHGLVQERHHHHG 54 E+S ++LEE + ER+ L G QE HHHHG Sbjct: 11 ELSTAAPLLLEEEDEERQ--ELMEDDEGDEQEEHHHHG 46 >05_01_0211 + 1591733-1591891,1592761-1592813,1593024-1593240 Length = 142 Score = 28.7 bits (61), Expect = 5.3 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = +1 Query: 250 CSGQGHGARQERRLVAPSGHGARQ--ERRLVA-PSTHVKHARSNRNDSINIT*CLVKI 414 C G HG +RR +G GA + RRL A P H ++N + +T C + + Sbjct: 18 CFGLAHGGAAQRRRRTAAGFGAARWSGRRLRALPPQHFLSPTIDKNQDLIVTVCALML 75 >12_01_0074 - 615794-615883,616186-616391,616524-616614 Length = 128 Score = 28.3 bits (60), Expect = 7.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 122 ERRGGHLEAVGHGLVQERHHHHGL 51 E GG LEA L+ +RHHHH L Sbjct: 2 EAAGGQLEAALL-LIMQRHHHHSL 24 >06_03_0340 + 19703574-19704329 Length = 251 Score = 28.3 bits (60), Expect = 7.1 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 250 CSGQGHGARQERRLVAPSGHGARQERRLVAPSTHVKHAR 366 CSG GHGA +++ V +G Q R + H HA+ Sbjct: 173 CSGSGHGAAEDKCCVCLAGMREAQALRDLPRCGHRFHAK 211 >01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491, 1171148-1171398,1171442-1171687,1172220-1172415, 1172796-1172876,1172966-1173169,1173671-1173880, 1173953-1174174,1174437-1174480,1174974-1175052, 1175066-1175227,1175337-1175564,1175786-1175815, 1175905-1176273,1176356-1176571,1177202-1177683, 1177930-1177975 Length = 1352 Score = 28.3 bits (60), Expect = 7.1 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = -3 Query: 194 RAVRLEEVSEVSLLGQVVLEEFECERRGGHLEAVGHGLVQERHHHH 57 R+ LEE S+ + G E+E R G GH RHHHH Sbjct: 1284 RSRSLEESSDDAAAG-----EYEKVRNGKRPHKTGHHRHHHRHHHH 1324 >11_04_0382 - 17001848-17002237 Length = 129 Score = 27.9 bits (59), Expect = 9.3 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 244 CPCSGQGHGARQERRLVAPSGHG 312 C G GHG+R ER LV +G G Sbjct: 49 CSGGGGGHGSRSERCLVCGAGAG 71 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,647,980 Number of Sequences: 37544 Number of extensions: 249837 Number of successful extensions: 1037 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 996 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1034 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2039640244 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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