Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1624
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       31   0.010
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.29 
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    25   0.67 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   2.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.6  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   4.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.2  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   8.2  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 17/67 (25%), Positives = 37/67 (55%)
 Frame = +3

Query: 255 NSKNNSDVPKTVTPKGKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRS 434
           + K   D+  T+TP      KPDD++    ++ E  L+++  F++++   E+SV++    
Sbjct: 119 SEKEEKDMETTLTPCASPNRKPDDNQDHL-RRLEMSLEKSGLFSSKTS--EHSVDELSGK 175

Query: 435 MDNEFKQ 455
            DN+ ++
Sbjct: 176 SDNDAEE 182


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 8/37 (21%), Positives = 24/37 (64%)
 Frame = +1

Query: 118 KAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEK 228
           K   DK++++ + T++++  +++ T  + +  +N+EK
Sbjct: 375 KRRKDKREITRKSTSSSTHTSSQQTSDSFLSKRNSEK 411


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 505 RKPNENRRSNKFIDEKQ---RTNNDANKV 582
           ++ ++NRRSNK I EK+   R NN  N++
Sbjct: 29  KRVSDNRRSNKPIMEKRRRARINNSLNEL 57


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 231 CLFIVFIFYDC 199
           CLF++F+F DC
Sbjct: 292 CLFLLFVFCDC 302


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 231 CLFIVFIFYDC 199
           CLF++F+F DC
Sbjct: 292 CLFLLFVFCDC 302


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 231 CLFIVFIFYDC 199
           CLF++F+F DC
Sbjct: 292 CLFLLFVFCDC 302


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/47 (19%), Positives = 22/47 (46%)
 Frame = +2

Query: 485 GTNQNTNENQTKIDDQTNSSTKNNEQTTMPTKSISTQEQTKTSKKGK 625
           GTN  TN+N  ++   T +   +        K+    ++++ +++ K
Sbjct: 113 GTNNGTNKNMRRLSTTTQNKNDDPSYWEKRRKNNEAAKRSRDARRAK 159


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 267 NSDVPKTVTPKGKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDK 401
           + D PK +   G+++   D+D ++ +KK +K +KE    + E +K
Sbjct: 241 DKDKPK-IEDVGEDE---DEDTKKEDKKKKKTIKEKYTEDEELNK 281


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 578 LLASLFVRCFSSMNLFDRLFSFG 510
           ++ S+F+ C+S   +FD L  FG
Sbjct: 255 VIVSVFILCWSPYIIFDLLQVFG 277


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +1

Query: 4   ETTQNKSDGDGQNSEEIKITPSENKSSTPEKANEAQDV 117
           +TT+++     +   E   T     + TPE  NE+  V
Sbjct: 405 QTTESEPTQASEQPTESSTTQKPQTTKTPESGNESDGV 442


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 455 RANKNGCKRKGT 490
           RAN NGC+ +GT
Sbjct: 211 RANPNGCQIRGT 222


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 455 RANKNGCKRKGT 490
           RAN NGC+ +GT
Sbjct: 218 RANPNGCQIRGT 229


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 464 KNGCKRKGTNQNTNENQTKIDDQTNS 541
           K   + K  N +TN + +++DDQ  S
Sbjct: 75  KRSKRSKRPNGDTNGDTSQVDDQNES 100


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/32 (21%), Positives = 17/32 (53%)
 Frame = +2

Query: 461 NKNGCKRKGTNQNTNENQTKIDDQTNSSTKNN 556
           + N  ++   N N N   ++   +T+ ++KN+
Sbjct: 384 SNNHWRKNNPNDNRNNTSSRAQGETSRNSKNS 415


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 618 FFDVFVCSCVEIDFVGIVVCSLFFVDEFV*SSIFVWFSL 502
           F+D  +C   + D   + + + F V++F     F+W  L
Sbjct: 467 FYDAMICVAYKFDAAMMALRTSFLVNDFG----FIWLVL 501


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -3

Query: 690 RRFNLSSSCIPNESVDVFLYIPLPFFDVFVCSCVEIDFVGIVVCSLFF 547
           RR N   S I     + F  +  P     V S   I F G++V  LFF
Sbjct: 99  RRVNYKDSNIGLVVANAFFLLWTPAVIFVVLSKNGIVFAGLIVFILFF 146


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 180 VRLRGVVSFFGTHL 139
           V L G   FFGTH+
Sbjct: 368 VSLSGTFGFFGTHI 381


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 375 EKFNTESDKPENSVNDSP 428
           EKF+ E  +PENS    P
Sbjct: 122 EKFDPERFRPENSQKRHP 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.308    0.122    0.328 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,416
Number of Sequences: 336
Number of extensions: 3283
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)