Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1624
(770 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.069
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 29 0.21
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 28 0.28
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 27 0.85
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 27 0.85
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 27 0.85
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 26 1.5
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 25 2.0
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 3.4
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 7.9
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 23 7.9
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 23 7.9
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.069
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 73 NKSSTPEKANEAQDVKAADDKKQMSAEKTNNT 168
NK++ P++A E D AADD MS ++ T
Sbjct: 15 NKAAAPQQAPEPMDADAADDDALMSEDEEGGT 46
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 28.7 bits (61), Expect = 0.21
Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 3/151 (1%)
Frame = +1
Query: 109 QDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDK-NNEKTN--VTAESKLIQKIIRTC 279
QD D +A T V K+K N TN + +L+Q +
Sbjct: 792 QDQHEVDSLNDEIRRLNQENKEAFTSRMSLEVTKNKLENLLTNNLFRRKDELVQALQEIS 851
Query: 280 LKQLRRKAKSKQNQTTTNVXXXXXXXXXXXXXXNLIPKAINQKTLLMIVLGLWIMNLNKS 459
++ +R+ + +N+ + +A+ Q+ L L WI ++
Sbjct: 852 VEDRKRQLTNCRNEVVATEKRIKKVLTDTEEVDRKLSEALKQQKTLQKELESWIQKEKEA 911
Query: 460 QQKRLQKKRNQPKYQRKPNENRRSNKFIDEK 552
Q+K + + K+ K N R+ EK
Sbjct: 912 QEKLEEDGKRMEKWATKENMLRQKIDECTEK 942
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 28.3 bits (60), Expect = 0.28
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +2
Query: 485 GTNQNTNENQTKIDDQTNSSTKNNEQTTMPTKSISTQEQTKTSKKGKGIYKNTSTDSFGI 664
G+N N N N + + SS NN TT ++T T K G T T +
Sbjct: 154 GSNNNNNSNSSSSCNNHVSSNTNNNGTTNGGGELTTGGGTNGCTKAGGGGGGTGTGGGLV 213
Query: 665 QEEDK-LNRLKKSVSAFV 715
+K N ++K + + +
Sbjct: 214 SSSEKNYNPVRKKLGSMM 231
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.6 bits (56), Expect = 0.85
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +1
Query: 91 EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270
E+ +++D + D S+ +NN + +++ + T+ NN N L K +
Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235
Query: 271 RTCLKQLRRKAKSKQNQT 324
T +QL R + +Q QT
Sbjct: 236 -TEHEQLERLQQQQQQQT 252
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 26.6 bits (56), Expect = 0.85
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +1
Query: 91 EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270
E+ +++D + D S+ +NN + +++ + T+ NN N L K +
Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235
Query: 271 RTCLKQLRRKAKSKQNQT 324
T +QL R + +Q QT
Sbjct: 236 -TEHEQLERLQQQQQQQT 252
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 26.6 bits (56), Expect = 0.85
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +1
Query: 91 EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270
E+ +++D + D S+ +NN + +++ + T+ NN N L K +
Sbjct: 132 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 187
Query: 271 RTCLKQLRRKAKSKQNQT 324
T +QL R + +Q QT
Sbjct: 188 -TEHEQLERLQQQQQQQT 204
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 25.8 bits (54), Expect = 1.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 469 RLQKKRNQPKYQRKPNENRRSNKFIDEKQRTNNDANKVYFDT 594
RL +KR +R P+ N RS T N+ + Y DT
Sbjct: 516 RLDRKRKTGTKKRNPSSNDRSPN--QNSDSTENNEDLAYLDT 555
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 25.4 bits (53), Expect = 2.0
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +1
Query: 91 EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270
E+ +++D + D S+ +NN + ++ + T+ NN N L K +
Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSGNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235
Query: 271 RTCLKQLRRKAKSKQNQT 324
T +QL R + +Q QT
Sbjct: 236 -TEHEQLERLQQQQQQQT 252
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 24.6 bits (51), Expect = 3.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 22 SDGDGQNSEEIKITPSENKSSTPEKANEAQD--VKAADDKKQMSAE 153
+D DG+ ++ PS ++ ++ NEA D + AA++ + AE
Sbjct: 1173 NDDDGRERADLAAGPSGMRNRAIDEENEATDGGLNAAEEAAVVEAE 1218
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.4 bits (48), Expect = 7.9
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 333 RQAEKKPEKDLKENEKFNTESDKPENSVNDS-PR 431
+Q+ KKPEKD K +++ + D + ND+ PR
Sbjct: 80 QQSGKKPEKDRKPSDE---DDDDEGDEANDARPR 110
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 23.4 bits (48), Expect = 7.9
Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = +3
Query: 264 NNSDVPKTVTPKGKEQTKPDDDKRQAEKKPEKDLKENEKF-NTESDKPENSVNDSPRSMD 440
+N +T P + + Q + +LK NTE+DK +N S D
Sbjct: 60 DNESSEETQPPNDAGRDRLQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTVKFSFD 119
Query: 441 NEFKQEPTKTVA 476
Q+P A
Sbjct: 120 EPVPQKPDNAAA 131
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.4 bits (48), Expect = 7.9
Identities = 7/18 (38%), Positives = 16/18 (88%)
Frame = +1
Query: 445 NLNKSQQKRLQKKRNQPK 498
++NK ++K+ +KK+N+P+
Sbjct: 97 SINKRKKKKSKKKQNKPR 114
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.308 0.122 0.328
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,481
Number of Sequences: 2352
Number of extensions: 12330
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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