BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1624 (770 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.069 AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 29 0.21 AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 28 0.28 AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 27 0.85 AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 27 0.85 AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 27 0.85 CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 26 1.5 AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 25 2.0 M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 3.4 DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 7.9 CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 23 7.9 AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 23 7.9 >AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. Length = 1376 Score = 30.3 bits (65), Expect = 0.069 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 73 NKSSTPEKANEAQDVKAADDKKQMSAEKTNNT 168 NK++ P++A E D AADD MS ++ T Sbjct: 15 NKAAAPQQAPEPMDADAADDDALMSEDEEGGT 46 >AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. Length = 1201 Score = 28.7 bits (61), Expect = 0.21 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 3/151 (1%) Frame = +1 Query: 109 QDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDK-NNEKTN--VTAESKLIQKIIRTC 279 QD D +A T V K+K N TN + +L+Q + Sbjct: 792 QDQHEVDSLNDEIRRLNQENKEAFTSRMSLEVTKNKLENLLTNNLFRRKDELVQALQEIS 851 Query: 280 LKQLRRKAKSKQNQTTTNVXXXXXXXXXXXXXXNLIPKAINQKTLLMIVLGLWIMNLNKS 459 ++ +R+ + +N+ + +A+ Q+ L L WI ++ Sbjct: 852 VEDRKRQLTNCRNEVVATEKRIKKVLTDTEEVDRKLSEALKQQKTLQKELESWIQKEKEA 911 Query: 460 QQKRLQKKRNQPKYQRKPNENRRSNKFIDEK 552 Q+K + + K+ K N R+ EK Sbjct: 912 QEKLEEDGKRMEKWATKENMLRQKIDECTEK 942 >AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoisomerase protein. Length = 1039 Score = 28.3 bits (60), Expect = 0.28 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Frame = +2 Query: 485 GTNQNTNENQTKIDDQTNSSTKNNEQTTMPTKSISTQEQTKTSKKGKGIYKNTSTDSFGI 664 G+N N N N + + SS NN TT ++T T K G T T + Sbjct: 154 GSNNNNNSNSSSSCNNHVSSNTNNNGTTNGGGELTTGGGTNGCTKAGGGGGGTGTGGGLV 213 Query: 665 QEEDK-LNRLKKSVSAFV 715 +K N ++K + + + Sbjct: 214 SSSEKNYNPVRKKLGSMM 231 >AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific transcription factor FRU-MA protein. Length = 960 Score = 26.6 bits (56), Expect = 0.85 Identities = 19/78 (24%), Positives = 36/78 (46%) Frame = +1 Query: 91 EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270 E+ +++D + D S+ +NN + +++ + T+ NN N L K + Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235 Query: 271 RTCLKQLRRKAKSKQNQT 324 T +QL R + +Q QT Sbjct: 236 -TEHEQLERLQQQQQQQT 252 >AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific transcription factor FRU-MB protein. Length = 759 Score = 26.6 bits (56), Expect = 0.85 Identities = 19/78 (24%), Positives = 36/78 (46%) Frame = +1 Query: 91 EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270 E+ +++D + D S+ +NN + +++ + T+ NN N L K + Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235 Query: 271 RTCLKQLRRKAKSKQNQT 324 T +QL R + +Q QT Sbjct: 236 -TEHEQLERLQQQQQQQT 252 >AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-specific zinc-fingerC isoform protein. Length = 593 Score = 26.6 bits (56), Expect = 0.85 Identities = 19/78 (24%), Positives = 36/78 (46%) Frame = +1 Query: 91 EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270 E+ +++D + D S+ +NN + +++ + T+ NN N L K + Sbjct: 132 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 187 Query: 271 RTCLKQLRRKAKSKQNQT 324 T +QL R + +Q QT Sbjct: 188 -TEHEQLERLQQQQQQQT 204 >CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. Length = 1664 Score = 25.8 bits (54), Expect = 1.5 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 469 RLQKKRNQPKYQRKPNENRRSNKFIDEKQRTNNDANKVYFDT 594 RL +KR +R P+ N RS T N+ + Y DT Sbjct: 516 RLDRKRKTGTKKRNPSSNDRSPN--QNSDSTENNEDLAYLDT 555 >AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-specific zinc-fingerC isoform protein. Length = 569 Score = 25.4 bits (53), Expect = 2.0 Identities = 19/78 (24%), Positives = 35/78 (44%) Frame = +1 Query: 91 EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270 E+ +++D + D S+ +NN + ++ + T+ NN N L K + Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSGNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235 Query: 271 RTCLKQLRRKAKSKQNQT 324 T +QL R + +Q QT Sbjct: 236 -TEHEQLERLQQQQQQQT 252 >M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles gambiae RT2 retroposon. ). Length = 1222 Score = 24.6 bits (51), Expect = 3.4 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +1 Query: 22 SDGDGQNSEEIKITPSENKSSTPEKANEAQD--VKAADDKKQMSAE 153 +D DG+ ++ PS ++ ++ NEA D + AA++ + AE Sbjct: 1173 NDDDGRERADLAAGPSGMRNRAIDEENEATDGGLNAAEEAAVVEAE 1218 >DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. Length = 847 Score = 23.4 bits (48), Expect = 7.9 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +3 Query: 333 RQAEKKPEKDLKENEKFNTESDKPENSVNDS-PR 431 +Q+ KKPEKD K +++ + D + ND+ PR Sbjct: 80 QQSGKKPEKDRKPSDE---DDDDEGDEANDARPR 110 >CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein protein. Length = 615 Score = 23.4 bits (48), Expect = 7.9 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 1/72 (1%) Frame = +3 Query: 264 NNSDVPKTVTPKGKEQTKPDDDKRQAEKKPEKDLKENEKF-NTESDKPENSVNDSPRSMD 440 +N +T P + + Q + +LK NTE+DK +N S D Sbjct: 60 DNESSEETQPPNDAGRDRLQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTVKFSFD 119 Query: 441 NEFKQEPTKTVA 476 Q+P A Sbjct: 120 EPVPQKPDNAAA 131 >AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein protein. Length = 344 Score = 23.4 bits (48), Expect = 7.9 Identities = 7/18 (38%), Positives = 16/18 (88%) Frame = +1 Query: 445 NLNKSQQKRLQKKRNQPK 498 ++NK ++K+ +KK+N+P+ Sbjct: 97 SINKRKKKKSKKKQNKPR 114 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.308 0.122 0.328 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 649,481 Number of Sequences: 2352 Number of extensions: 12330 Number of successful extensions: 41 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 41 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 80249979 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.7 bits)
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