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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1624
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    30   0.069
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.21 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    28   0.28 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.85 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.85 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.85 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.5  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   3.4  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   7.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   7.9  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   7.9  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 30.3 bits (65), Expect = 0.069
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 73  NKSSTPEKANEAQDVKAADDKKQMSAEKTNNT 168
           NK++ P++A E  D  AADD   MS ++   T
Sbjct: 15  NKAAAPQQAPEPMDADAADDDALMSEDEEGGT 46


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 3/151 (1%)
 Frame = +1

Query: 109  QDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDK-NNEKTN--VTAESKLIQKIIRTC 279
            QD    D              +A T      V K+K  N  TN     + +L+Q +    
Sbjct: 792  QDQHEVDSLNDEIRRLNQENKEAFTSRMSLEVTKNKLENLLTNNLFRRKDELVQALQEIS 851

Query: 280  LKQLRRKAKSKQNQTTTNVXXXXXXXXXXXXXXNLIPKAINQKTLLMIVLGLWIMNLNKS 459
            ++  +R+  + +N+                     + +A+ Q+  L   L  WI    ++
Sbjct: 852  VEDRKRQLTNCRNEVVATEKRIKKVLTDTEEVDRKLSEALKQQKTLQKELESWIQKEKEA 911

Query: 460  QQKRLQKKRNQPKYQRKPNENRRSNKFIDEK 552
            Q+K  +  +   K+  K N  R+      EK
Sbjct: 912  QEKLEEDGKRMEKWATKENMLRQKIDECTEK 942


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +2

Query: 485 GTNQNTNENQTKIDDQTNSSTKNNEQTTMPTKSISTQEQTKTSKKGKGIYKNTSTDSFGI 664
           G+N N N N +   +   SS  NN  TT     ++T   T    K  G    T T    +
Sbjct: 154 GSNNNNNSNSSSSCNNHVSSNTNNNGTTNGGGELTTGGGTNGCTKAGGGGGGTGTGGGLV 213

Query: 665 QEEDK-LNRLKKSVSAFV 715
              +K  N ++K + + +
Sbjct: 214 SSSEKNYNPVRKKLGSMM 231


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 19/78 (24%), Positives = 36/78 (46%)
 Frame = +1

Query: 91  EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270
           E+  +++D +  D     S+  +NN + +++ +   T+    NN   N      L  K +
Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235

Query: 271 RTCLKQLRRKAKSKQNQT 324
            T  +QL R  + +Q QT
Sbjct: 236 -TEHEQLERLQQQQQQQT 252


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 19/78 (24%), Positives = 36/78 (46%)
 Frame = +1

Query: 91  EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270
           E+  +++D +  D     S+  +NN + +++ +   T+    NN   N      L  K +
Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235

Query: 271 RTCLKQLRRKAKSKQNQT 324
            T  +QL R  + +Q QT
Sbjct: 236 -TEHEQLERLQQQQQQQT 252


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 19/78 (24%), Positives = 36/78 (46%)
 Frame = +1

Query: 91  EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270
           E+  +++D +  D     S+  +NN + +++ +   T+    NN   N      L  K +
Sbjct: 132 ERIRDSRDER--DSLPNASSNNSNNNNNSSSNNNNNTI--SSNNNNNNSLHHGPLRDKEL 187

Query: 271 RTCLKQLRRKAKSKQNQT 324
            T  +QL R  + +Q QT
Sbjct: 188 -TEHEQLERLQQQQQQQT 204


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 469 RLQKKRNQPKYQRKPNENRRSNKFIDEKQRTNNDANKVYFDT 594
           RL +KR     +R P+ N RS         T N+ +  Y DT
Sbjct: 516 RLDRKRKTGTKKRNPSSNDRSPN--QNSDSTENNEDLAYLDT 555


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 19/78 (24%), Positives = 35/78 (44%)
 Frame = +1

Query: 91  EKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTAESKLIQKII 270
           E+  +++D +  D     S+  +NN + ++  +   T+    NN   N      L  K +
Sbjct: 180 ERIRDSRDER--DSLPNASSNNSNNNNNSSGNNNNNTI--SSNNNNNNSLHHGPLRDKEL 235

Query: 271 RTCLKQLRRKAKSKQNQT 324
            T  +QL R  + +Q QT
Sbjct: 236 -TEHEQLERLQQQQQQQT 252


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 22   SDGDGQNSEEIKITPSENKSSTPEKANEAQD--VKAADDKKQMSAE 153
            +D DG+   ++   PS  ++   ++ NEA D  + AA++   + AE
Sbjct: 1173 NDDDGRERADLAAGPSGMRNRAIDEENEATDGGLNAAEEAAVVEAE 1218


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 333 RQAEKKPEKDLKENEKFNTESDKPENSVNDS-PR 431
           +Q+ KKPEKD K +++   + D   +  ND+ PR
Sbjct: 80  QQSGKKPEKDRKPSDE---DDDDEGDEANDARPR 110


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
 Frame = +3

Query: 264 NNSDVPKTVTPKGKEQTKPDDDKRQAEKKPEKDLKENEKF-NTESDKPENSVNDSPRSMD 440
           +N    +T  P    + +      Q  +    +LK      NTE+DK    +N    S D
Sbjct: 60  DNESSEETQPPNDAGRDRLQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTVKFSFD 119

Query: 441 NEFKQEPTKTVA 476
               Q+P    A
Sbjct: 120 EPVPQKPDNAAA 131


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 7/18 (38%), Positives = 16/18 (88%)
 Frame = +1

Query: 445 NLNKSQQKRLQKKRNQPK 498
           ++NK ++K+ +KK+N+P+
Sbjct: 97  SINKRKKKKSKKKQNKPR 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.308    0.122    0.328 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,481
Number of Sequences: 2352
Number of extensions: 12330
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)

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