Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1623X
         (428 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    39   0.038
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   0.62 
UniRef50_Q2GYR1 Cluster: Putative uncharacterized protein; n=1; ...    34   1.1  
UniRef50_Q2NID2 Cluster: Predicted glycosyltransferase; n=1; Met...    33   1.9  
UniRef50_A6EXX7 Cluster: Methyl-accepting chemotaxis protein; n=...    33   2.5  
UniRef50_A5AVT2 Cluster: Putative uncharacterized protein; n=3; ...    33   3.3  
UniRef50_A5BK51 Cluster: Putative uncharacterized protein; n=3; ...    32   5.8  
UniRef50_Q7Q3B7 Cluster: ENSANGP00000010381; n=1; Anopheles gamb...    32   5.8  
UniRef50_Q55AP8 Cluster: EGF-like domain-containing protein; n=2...    32   5.8  
UniRef50_Q60T21 Cluster: Putative uncharacterized protein CBG206...    31   7.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 39.1 bits (87), Expect = 0.038
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -1

Query: 428 RLVDELTAHLVLSGYWNP 375
           R VDELTAHLVLSGYW+P
Sbjct: 158 RWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 0.62
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -2

Query: 250 WWYPPAWTHKRSYHQ 206
           WWY PA THKRSYH+
Sbjct: 571 WWYLPARTHKRSYHR 585


>UniRef50_Q2GYR1 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 538

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = -2

Query: 241 PPAWTHKRSYHQ*SFG-----IINPNHNXEHPVYSHATRLRPATHIPQRCSPEQHI 89
           P    H+  +HQ + G     I +PNHN +HP + HAT + P    PQ   P +H+
Sbjct: 106 PRLMKHRHQHHQPNHGPQIMRIQHPNHNQQHPRH-HATHMHPPLLPPQ--LPPRHL 158


>UniRef50_Q2NID2 Cluster: Predicted glycosyltransferase; n=1;
           Methanosphaera stadtmanae DSM 3091|Rep: Predicted
           glycosyltransferase - Methanosphaera stadtmanae (strain
           DSM 3091)
          Length = 413

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +2

Query: 176 VIRVYNTKRLLVVGPLVSPSGWVPPPSYFCREAVMRFRLKDGAAVVTI 319
           +I++YNT +L+V  P + P G+VP  +  C   V+   +K+G    T+
Sbjct: 301 LIKLYNTAKLVVYAPYLEPFGYVPLEAMACGTPVV--GVKEGGVKETV 346


>UniRef50_A6EXX7 Cluster: Methyl-accepting chemotaxis protein; n=1;
           Marinobacter algicola DG893|Rep: Methyl-accepting
           chemotaxis protein - Marinobacter algicola DG893
          Length = 523

 Score = 33.1 bits (72), Expect = 2.5
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +3

Query: 9   DVRXEITAARRASSRCDVHSSVVRTNSMCCSGEHRCGMCVAGLSRVA 149
           +VR ++  AR + S   +  +V+R NS+   G   CG   + LS VA
Sbjct: 234 EVRLKVMVARISDSGGQIEDNVLRANSLLQGGSEACGQQQSALSSVA 280


>UniRef50_A5AVT2 Cluster: Putative uncharacterized protein; n=3;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 2093

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -2

Query: 280 HYCFTAEIGGWWYPPAWTHKRSYHQ*SFGIINPN--HNXEHPVYSHATRLRPATHIPQRC 107
           +Y    +  G +YPP+  H +      F  ++P   H+   PVY+  T  RP  H PQ  
Sbjct: 277 YYQTVGQTSGVYYPPS-PHVQYRSPVPFRPMSPTYLHSAPQPVYATQTTQRPPAHYPQPR 335

Query: 106 SP 101
           +P
Sbjct: 336 AP 337


>UniRef50_A5BK51 Cluster: Putative uncharacterized protein; n=3;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1839

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -2

Query: 280 HYCFTAEIGGWWYPPAWTHKRSYHQ*SFGIINPN--HNXEHPVYSHATRLRPATHIPQRC 107
           +Y    +  G +YPP+  H +      F  ++P   H+   PVY+  T  RP  H PQ  
Sbjct: 340 YYQTVGQTXGVYYPPS-PHVQYRSPVPFRPMSPTYLHSAPQPVYATQTTQRPPXHYPQPR 398

Query: 106 SP 101
           +P
Sbjct: 399 AP 400


>UniRef50_Q7Q3B7 Cluster: ENSANGP00000010381; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000010381 - Anopheles gambiae
           str. PEST
          Length = 498

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 22  RSLRLVEPVADAMYIPAWSELILCVVQASTVAVCVSPALAAS 147
           + +RL+EP+ D +Y+  W+  +L +V   T+++    A  A+
Sbjct: 176 KQIRLLEPIMDTLYVLHWTSCLLYIVPLLTLSLLGDNAFEAN 217


>UniRef50_Q55AP8 Cluster: EGF-like domain-containing protein; n=2;
           Dictyostelium discoideum|Rep: EGF-like domain-containing
           protein - Dictyostelium discoideum AX4
          Length = 1501

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 106 STVAVCVSPALAASRDCIQDVRXCDSGL*YQKITGGRTSCESK 234
           +TV +CV  +   S DC  D + C  GL     +GG  SC ++
Sbjct: 644 TTVGLCVCDSSHQSLDCSLDFKQCPKGLNSLICSGGGNSCNNQ 686


>UniRef50_Q60T21 Cluster: Putative uncharacterized protein CBG20662;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG20662 - Caenorhabditis
           briggsae
          Length = 783

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 212 VGPLVSPSGWVPPPSYFCREAVMRFRLKDGAAVVTILETLEVTSQGG 352
           V  +V+P GW P PS  C   V  + +        + ET+E+T + G
Sbjct: 62  VAKIVAPEGWTPRPSKSCFSDVKSYEINQ-----PVRETIEITEKPG 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,391,701
Number of Sequences: 1657284
Number of extensions: 8882323
Number of successful extensions: 22025
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22020
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)