Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1623X
         (428 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   2.2  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   2.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   3.8  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   3.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   8.7  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 7   LMFDXRSLRLVEPVADAMYIPA 72
           L+FD RSLR V P  +   +P+
Sbjct: 190 LVFDRRSLRCVVPPTEDCDVPS 211


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +2

Query: 323 ETLEVTSQGGWRICVISMGSSNHLTPGE 406
           E +E+  +GGW++       + H+  G+
Sbjct: 301 EIVELQKEGGWKVVWDDTQKNTHMYKGD 328


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 221 EVLPPVIFWYYKPESQXRTSCIQSRDAAKAGD 126
           ++  P  F +YKPE   R +      AA  GD
Sbjct: 491 KIFLPFRFLFYKPEDIFRPNTYNRFLAATGGD 522


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 245 VPTRLDSQEVLPPVIFWYYKP 183
           +PT L  QEV PP  +++ +P
Sbjct: 11  LPTVLPHQEVPPPFGYYHEEP 31


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 277 YCFTAEIGGW 248
           +C+  EIGGW
Sbjct: 134 WCWIVEIGGW 143


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 236 RLDSQEVLPPVIFWYY 189
           R D+  +  PV+FW +
Sbjct: 66  RTDTNRITQPVLFWIH 81


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 218 VLPPVIFWYYKP 183
           ++ P+I +YYKP
Sbjct: 126 IVKPIIAFYYKP 137


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +1

Query: 82  LILCVVQASTVAVCVSPALAASRDCIQDVRXC 177
           L+ C      +  C+     A+  CI+ +R C
Sbjct: 27  LLSCSFPKKKLVYCIIFGAIATLTCIEGLRDC 58


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +1

Query: 82  LILCVVQASTVAVCVSPALAASRDCIQDVRXC 177
           L+ C      +  C+     A+  CI+ +R C
Sbjct: 23  LLSCSFPKKKLVYCIIFGAIATLTCIEGLRDC 54


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/23 (30%), Positives = 9/23 (39%)
 Frame = -2

Query: 421 WTSSQLTWC*VVTGTHRNYANAP 353
           W +    WC    G  + Y N P
Sbjct: 481 WVTDGNNWCSPYIGWQKVYENKP 503


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,277
Number of Sequences: 336
Number of extensions: 2194
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)