Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1623X
         (428 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p pro...    31   0.65 
AE014297-1407|AAO41547.1|  514|Drosophila melanogaster CG31211-P...    31   0.65 
AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-P...    31   0.65 
AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-P...    31   0.65 
D50542-1|BAA09102.1|  486|Drosophila melanogaster GATA transcrip...    29   2.6  
AY071369-1|AAL48991.1|  486|Drosophila melanogaster RE40104p pro...    29   2.6  
AE014297-700|AAF54195.1|  486|Drosophila melanogaster CG9656-PA ...    29   2.6  
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr...    28   4.6  
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA...    28   4.6  

>AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p
           protein.
          Length = 874

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 226 HKRSYHQ*SFGIINPNHNXEHPVYSHATRLRPATHIPQRCSPEQHIE 86
           H++   Q +    +P+H   H  ++H   L P TH+P + + + H E
Sbjct: 234 HQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHTHLPPQHTQQTHAE 280


>AE014297-1407|AAO41547.1|  514|Drosophila melanogaster CG31211-PC,
           isoform C protein.
          Length = 514

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 226 HKRSYHQ*SFGIINPNHNXEHPVYSHATRLRPATHIPQRCSPEQHIE 86
           H++   Q +    +P+H   H  ++H   L P TH+P + + + H E
Sbjct: 234 HQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHTHLPPQHTQQTHAE 280


>AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-PA,
           isoform A protein.
          Length = 874

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 226 HKRSYHQ*SFGIINPNHNXEHPVYSHATRLRPATHIPQRCSPEQHIE 86
           H++   Q +    +P+H   H  ++H   L P TH+P + + + H E
Sbjct: 234 HQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHTHLPPQHTQQTHAE 280


>AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-PB,
           isoform B protein.
          Length = 893

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 226 HKRSYHQ*SFGIINPNHNXEHPVYSHATRLRPATHIPQRCSPEQHIE 86
           H++   Q +    +P+H   H  ++H   L P TH+P + + + H E
Sbjct: 234 HQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHTHLPPQHTQQTHAE 280


>D50542-1|BAA09102.1|  486|Drosophila melanogaster GATA
           transcription factor protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -2

Query: 187 NPNHNXEHPVYSHATRLRPATHI-PQRCSPEQHIEL 83
           N +H   +P Y   T   P+TH  PQ C P  H  L
Sbjct: 94  NGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPL 129


>AY071369-1|AAL48991.1|  486|Drosophila melanogaster RE40104p
           protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -2

Query: 187 NPNHNXEHPVYSHATRLRPATHI-PQRCSPEQHIEL 83
           N +H   +P Y   T   P+TH  PQ C P  H  L
Sbjct: 94  NGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPL 129


>AE014297-700|AAF54195.1|  486|Drosophila melanogaster CG9656-PA
           protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -2

Query: 187 NPNHNXEHPVYSHATRLRPATHI-PQRCSPEQHIEL 83
           N +H   +P Y   T   P+TH  PQ C P  H  L
Sbjct: 94  NGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPL 129


>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
            protein.
          Length = 1795

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -3

Query: 348  P*DVTSKVSSI-VTTAAPSFKRKRITASRQK*EG--GGTHPLGLTRGPTTSN 202
            P   TSK S++ +TT  PS   +R T + ++       T  +G TR PTT+N
Sbjct: 1023 PTTTTSKTSTVTITTPNPSPSTQRPTTTTRQPTSITASTTSIGTTRIPTTTN 1074


>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
            protein.
          Length = 1795

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -3

Query: 348  P*DVTSKVSSI-VTTAAPSFKRKRITASRQK*EG--GGTHPLGLTRGPTTSN 202
            P   TSK S++ +TT  PS   +R T + ++       T  +G TR PTT+N
Sbjct: 1023 PTTTTSKTSTVTITTPNPSPSTQRPTTTTRQPTSITASTTSIGTTRIPTTTN 1074


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,391,625
Number of Sequences: 53049
Number of extensions: 441334
Number of successful extensions: 1195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)