Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1623X
         (428 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-10|CAC48129.1|  106|Caenorhabditis elegans Hypothetical...    28   2.5  
U13071-1|AAL65794.1|  462|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z93388-13|CAB07666.1|  383|Caenorhabditis elegans Hypothetical p...    27   5.7  
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ...    27   5.7  
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    27   7.5  
Z50797-9|CAL36516.1|  640|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AL132876-5|CAC48119.1|  576|Caenorhabditis elegans Hypothetical ...    26   10.0 

>AL132876-10|CAC48129.1|  106|Caenorhabditis elegans Hypothetical
           protein Y105E8A.11 protein.
          Length = 106

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 51  RCDVHSSVVRTNSMCCSGEHRCGMCVAGLSRV 146
           R  + SS +R +S CC GEH+       +S++
Sbjct: 9   RSGLLSSAIRRHSACCGGEHKMSEAELKMSKL 40


>U13071-1|AAL65794.1|  462|Caenorhabditis elegans Hypothetical
           protein T22F7.5 protein.
          Length = 462

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 145 SRDCIQDVRXCDSGL*YQKITGGRTSCESKRVG 243
           +++C   +R C  G   Q   GG+T C + R+G
Sbjct: 83  AQECSVKLRNCPEGYSCQNSKGGKTICCTARIG 115


>Z93388-13|CAB07666.1|  383|Caenorhabditis elegans Hypothetical
           protein T10C6.10a protein.
          Length = 383

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -2

Query: 286 ETHYCFTAEI-GGWWYPPAWTHKRS 215
           ++H CF   I G   YP  W H+RS
Sbjct: 288 DSHGCFNPTILGSGSYPKKWNHRRS 312


>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
            protein Y46G5A.1a protein.
          Length = 1085

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 20/77 (25%), Positives = 31/77 (40%)
 Frame = -2

Query: 310  NGCPILQTETHYCFTAEIGGWWYPPAWTHKRSYHQ*SFGIINPNHNXEHPVYSHATRLRP 131
            NG P     T     ++ G    PP+ + KR + Q S       H+     Y H+   R 
Sbjct: 954  NGSPAAAAPTDAYNNSKNGA--LPPSGSSKRDFVQSSNTPTTTTHSSSSHRYQHSNSSRG 1011

Query: 130  ATHIPQRCSPEQHIELV 80
             T + QR   E+  ++V
Sbjct: 1012 GTPLAQRLRDERSGQVV 1028


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 259 IGGWWYPPAWTHKRSYHQ*SFGIINPNHNXEHPVYSHATR 140
           +G WWY  A   K  YH+ +   +   H   HP +  +T+
Sbjct: 877 LGEWWYSLAADQKAEYHKLATQ-VKEAHFKAHPDWKWSTK 915


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 259 IGGWWYPPAWTHKRSYHQ*SFGIINPNHNXEHPVYSHATR 140
           +G WWY  A   K  YH+ +   +   H   HP +  +T+
Sbjct: 877 LGEWWYSLAADQKAEYHKLATQ-VKEAHFKAHPDWKWSTK 915


>Z50797-9|CAL36516.1|  640|Caenorhabditis elegans Hypothetical
           protein T22H6.6b protein.
          Length = 640

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 259 IGGWWYPPAWTHKRSYHQ*SFGIINPNHNXEHPVYSHATR 140
           +G WWY  A   K  YH+ +   +   H   HP +  +T+
Sbjct: 112 LGEWWYSLAADQKAEYHKLATQ-VKEAHFKAHPDWKWSTK 150


>AL132876-5|CAC48119.1|  576|Caenorhabditis elegans Hypothetical
           protein Y105E8A.5 protein.
          Length = 576

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +2

Query: 164 MFXIVIRVYNTKRLLVVGPLVSPSGWVPPPSYFCREAVMRFRLKDGAAVVTI 319
           +F   IR+YN   LL       P  WV    Y   ++ +    KDG+  + I
Sbjct: 334 VFDKEIRMYNEHYLLDTVQYEKPLAWVKYGCYGREDSTLVVAFKDGSIAIQI 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,470,452
Number of Sequences: 27780
Number of extensions: 210063
Number of successful extensions: 521
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)