BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1623X (428 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 3.3 AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 3.3 EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 5.8 DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 5.8 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 5.8 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.7 AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 7.7 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.8 bits (44), Expect = 3.3 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 91 CVVQASTVAVCVSPALAASR 150 CV++AST A V A+ ASR Sbjct: 1106 CVLRASTPAPVVLEAVHASR 1125 >AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective protein-1 protein. Length = 128 Score = 21.8 bits (44), Expect = 3.3 Identities = 10/42 (23%), Positives = 17/42 (40%) Frame = +3 Query: 45 SSRCDVHSSVVRTNSMCCSGEHRCGMCVAGLSRVA*LYTGCS 170 SS C + + +C ++ G+C G+ GCS Sbjct: 53 SSACGIVQCAKGPDELCGGPQNYLGICAEGMQCSCNKCIGCS 94 >EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase protein. Length = 620 Score = 21.0 bits (42), Expect = 5.8 Identities = 10/32 (31%), Positives = 14/32 (43%) Frame = +3 Query: 15 RXEITAARRASSRCDVHSSVVRTNSMCCSGEH 110 R ++ A + D V T + C SGEH Sbjct: 275 RRKVLAGIVQTKGSDAELICVTTGTKCVSGEH 306 >DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related protein STG-1 protein. Length = 397 Score = 21.0 bits (42), Expect = 5.8 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +2 Query: 332 EVTSQGGWRICV 367 +VT G WR+CV Sbjct: 97 KVTYSGLWRVCV 108 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 21.0 bits (42), Expect = 5.8 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = -2 Query: 370 NYANAPPTLRC 338 NY PPTL C Sbjct: 209 NYTACPPTLAC 219 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 20.6 bits (41), Expect = 7.7 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = +2 Query: 200 RLLVVGPLVSPSGWVPPPSYFCREAV 277 RL +GP S ++PP +Y R ++ Sbjct: 374 RLRYIGPPTSFPRFIPPNAYRFRPSL 399 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 20.6 bits (41), Expect = 7.7 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +1 Query: 211 GRTSCESKRVGTTTLLFLP 267 GR++C S V +T FLP Sbjct: 295 GRSACHSPGVYPSTAGFLP 313 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 132,318 Number of Sequences: 438 Number of extensions: 2810 Number of successful extensions: 8 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 11121030 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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