Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1621
(838 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55035 Cluster: 26S proteasome non-ATPase regulatory su... 147 3e-34
UniRef50_O17453 Cluster: 26S proteasome non-ATPase regulatory su... 111 2e-23
UniRef50_O61742 Cluster: Proteasome regulatory particle, non-atp... 106 8e-22
UniRef50_P55034 Cluster: 26S proteasome non-ATPase regulatory su... 101 3e-20
UniRef50_A5DWY2 Cluster: 26S proteasome regulatory subunit RPN10... 91 4e-17
UniRef50_Q5CQJ0 Cluster: 26S proteasome regulatory subunit 5a wi... 84 4e-15
UniRef50_Q5KP07 Cluster: RPN10-like protein, putative; n=2; Filo... 83 6e-15
UniRef50_P38886 Cluster: 26S proteasome regulatory subunit RPN10... 83 6e-15
UniRef50_Q2UCW0 Cluster: RIB40 genomic DNA, SC012; n=5; Pezizomy... 78 3e-13
UniRef50_Q7RH03 Cluster: 26s proteasome regulatory subunit s5a (... 77 6e-13
UniRef50_Q553E0 Cluster: VWFA domain-containing protein; n=2; Di... 76 1e-12
UniRef50_A5KAC7 Cluster: 26S proteasome non-ATPase regulatory su... 75 2e-12
UniRef50_Q7XGY3 Cluster: 26S proteasome regulatory subunit S5A, ... 72 2e-11
UniRef50_UPI00006CFB2F Cluster: Ubiquitin interaction motif fami... 69 1e-10
UniRef50_UPI0000499B9D Cluster: proteasome regulatory subunit; n... 69 2e-10
UniRef50_UPI00005A2BB8 Cluster: PREDICTED: similar to 26S protea... 63 1e-08
UniRef50_Q4QIH4 Cluster: Proteasome regulatory non-ATP-ase subun... 61 4e-08
UniRef50_Q4U9U3 Cluster: Putative uncharacterized protein; n=3; ... 59 2e-07
UniRef50_A0BVM1 Cluster: Chromosome undetermined scaffold_130, w... 57 5e-07
UniRef50_A2EVI3 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A2EEG1 Cluster: Ubiquitin interaction motif family prot... 39 0.18
UniRef50_UPI0000F1FF43 Cluster: PREDICTED: similar to phosphatid... 36 1.3
UniRef50_A2EQF8 Cluster: 26S proteasome regulatory subunit S5-re... 34 3.8
UniRef50_Q23A27 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_Q02A45 Cluster: Von Willebrand factor, type A precursor... 33 6.7
UniRef50_Q0U378 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 6.7
UniRef50_A7CTN6 Cluster: Putative uncharacterized protein precur... 33 8.9
>UniRef50_P55035 Cluster: 26S proteasome non-ATPase regulatory
subunit 4; n=3; Diptera|Rep: 26S proteasome non-ATPase
regulatory subunit 4 - Drosophila melanogaster (Fruit
fly)
Length = 396
Score = 147 bits (356), Expect = 3e-34
Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN-VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKH 177
K RSNPENNVGL+TL+N VEVLATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKH
Sbjct: 40 KLRSNPENNVGLMTLSNTVEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKH 99
Query: 178 RQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTV 294
RQGKNHKMRIVVFVGSP+N +E +LV K ++ K V
Sbjct: 100 RQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNV 138
Score = 83.4 bits (197), Expect = 6e-15
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +3
Query: 171 KTPSGKESQDAHSSFCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFV 350
K GK + F P H K AKRLKKEKVN D+VSFG+ NN +LT F+
Sbjct: 98 KHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFI 157
Query: 351 NTLNGKDTSTGGSHLVSVPAGGCVVLSEALITS 449
N LNGKD + GSHLVSVP G VLS+AL++S
Sbjct: 158 NALNGKDGT--GSHLVSVPRGS--VLSDALLSS 186
Score = 47.6 bits (108), Expect = 4e-04
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 14/63 (22%)
Frame = +2
Query: 692 DAMELSEEEQIALAMQMSMQ--------QEA--PG*RE----LDVSEEYAEVMNDPAFLQ 829
D ++EEEQIA AMQMSMQ Q+A P E +DV E+Y+EV+ DPAFLQ
Sbjct: 298 DFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQ 357
Query: 830 SVL 838
SVL
Sbjct: 358 SVL 360
Score = 39.9 bits (89), Expect = 0.077
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 500 FRIGVDPNVDPELALALRVSM 562
F GVDPN DPELALALRVSM
Sbjct: 205 FEFGVDPNEDPELALALRVSM 225
>UniRef50_O17453 Cluster: 26S proteasome non-ATPase regulatory
subunit 4; n=7; Schistosoma|Rep: 26S proteasome
non-ATPase regulatory subunit 4 - Schistosoma mansoni
(Blood fluke)
Length = 420
Score = 111 bits (267), Expect = 2e-23
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLANVEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHR 180
K + NPEN +GLL+LAN EVL TLT+DV +I ++LH V+P G I + IRIAHLAL+HR
Sbjct: 40 KRQRNPENTIGLLSLANTEVLCTLTNDVSKIYNRLHLVEPKGRIIFCSSIRIAHLALRHR 99
Query: 181 QGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTV 294
Q ++ KMRIV F+GSP+ DEKEL K ++ K V
Sbjct: 100 QLRHQKMRIVCFIGSPILEDEKELTRLAKRLKKEKVNV 137
Score = 71.3 bits (167), Expect = 3e-11
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +3
Query: 213 FCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSH 392
F P K +LAKRLKKEKVN D+++FGE+ N L+ F++TLNGKD + GSH
Sbjct: 111 FIGSPILEDEKELTRLAKRLKKEKVNVDIINFGENETNEQKLSEFIDTLNGKDGT--GSH 168
Query: 393 LVSVPAGGCVVLSEALITS 449
L+SV G VL + L+TS
Sbjct: 169 LISVAPG--TVLHDTLMTS 185
>UniRef50_O61742 Cluster: Proteasome regulatory particle,
non-atpase-like protein 10; n=2; Caenorhabditis|Rep:
Proteasome regulatory particle, non-atpase-like protein
10 - Caenorhabditis elegans
Length = 346
Score = 106 bits (254), Expect = 8e-22
Identities = 51/97 (52%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN-VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKH 177
K R+NPEN VG+L++AN V+VL++L+++ GR+M K H ++P G N + GI+IAHLALKH
Sbjct: 40 KLRANPENAVGILSMANSVQVLSSLSTEQGRLMMKNHSIEPFGKCNFIAGIKIAHLALKH 99
Query: 178 RQGKNHKMRIVVFVGSPVNTDE-KELVN*LKG*RRRK 285
RQ +NHKMR+V+F+GSP+ E ELV K ++ K
Sbjct: 100 RQNRNHKMRVVLFIGSPLEEIEMNELVKIAKKMKKEK 136
Score = 62.1 bits (144), Expect = 2e-08
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 KLAKRLKKEKVNCDVVSFGE-DSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAGGCVVLS 431
K+AK++KKEKV CDV+ FGE +S+ + +TFV+TLNGK+ S GS L+ VP G L+
Sbjct: 127 KIAKKMKKEKVLCDVIMFGENESDGHEKFSTFVDTLNGKEGS--GSSLIVVPQGSS--LT 182
Query: 432 EALITS 449
+AL+ S
Sbjct: 183 DALLQS 188
>UniRef50_P55034 Cluster: 26S proteasome non-ATPase regulatory
subunit 4; n=11; Eukaryota|Rep: 26S proteasome
non-ATPase regulatory subunit 4 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 386
Score = 101 bits (241), Expect = 3e-20
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN--VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
KT+SNPEN VG+LT+A V VL T TSD+G+I++ +H + G+INL I+IA LALK
Sbjct: 40 KTQSNPENTVGILTMAGKGVRVLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALK 99
Query: 175 HRQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTVML 300
HRQ KN + RI+VF GSP+ ++K L + G R +K++V L
Sbjct: 100 HRQNKNQRQRIIVFAGSPIKYEKKALE--IVGKRLKKNSVSL 139
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +3
Query: 213 FCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGE-DSENNP-LLTTFVNTLNGKDTSTGG 386
F P ++ +K + KRLKK V+ D+V+FGE D E P L + +N D G
Sbjct: 113 FAGSPIKYEKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNND----G 168
Query: 387 SHLVSVPAGGCVVLSEALITS 449
SH+V VP+ G LS+ L+++
Sbjct: 169 SHIVHVPS-GANALSDVLLST 188
Score = 41.1 bits (92), Expect = 0.033
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 500 FRIGVDPNVDPELALALRVSM 562
F GVDPN+DPELALALRVSM
Sbjct: 214 FDFGVDPNIDPELALALRVSM 234
>UniRef50_A5DWY2 Cluster: 26S proteasome regulatory subunit RPN10;
n=12; Ascomycota|Rep: 26S proteasome regulatory subunit
RPN10 - Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 305
Score = 90.6 bits (215), Expect = 4e-17
Identities = 45/86 (52%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 KTRSNPENNVGLLTL--ANVEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
K SNPEN VG+L A +VL+TLT+D G+I+S +H + GD N GI++A LALK
Sbjct: 40 KVNSNPENTVGVLAYGGAGPQVLSTLTTDFGKILSGVHETKIEGDNNFSDGIQVAALALK 99
Query: 175 HRQGKNHKMRIVVFVGSPVNTDEKEL 252
HRQ K + RI++FVGSP+ EKEL
Sbjct: 100 HRQNKVQQQRIIIFVGSPIKELEKEL 125
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/83 (36%), Positives = 42/83 (50%)
Frame = +3
Query: 165 SFKTPSGKESQDAHSSFCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTT 344
+ K K Q F P + K KLAK++KK V D+++FGE+S N L
Sbjct: 97 ALKHRQNKVQQQRIIIFVGSPIKELEKELEKLAKKMKKNNVAIDIINFGEESINTSKLEK 156
Query: 345 FVNTLNGKDTSTGGSHLVSVPAG 413
F + +N +D SHLV+VP G
Sbjct: 157 FHSVINNQD----NSHLVTVPPG 175
>UniRef50_Q5CQJ0 Cluster: 26S proteasome regulatory subunit 5a with
a vWA domain and two ubiquitin interacting motifs; n=2;
Cryptosporidium|Rep: 26S proteasome regulatory subunit
5a with a vWA domain and two ubiquitin interacting
motifs - Cryptosporidium parvum Iowa II
Length = 383
Score = 84.2 bits (199), Expect = 4e-15
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN--VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
KT+ NPEN VG+L++A +E+ T TSD+ + M + ++ NG I+LL GI+IA LALK
Sbjct: 40 KTQQNPENLVGILSMAGERIELRVTPTSDLSKTMHAMDGIRLNGKIDLLRGIQIAQLALK 99
Query: 175 HRQGKNHKMRIVVFVGSPVNTD--EKEL 252
HR KN + RIV FVGSP+ D EK+L
Sbjct: 100 HRLNKNLRQRIVCFVGSPLEDDLTEKQL 127
Score = 39.1 bits (87), Expect = 0.14
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 243 KGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTS 377
K KL K LKK V+ D++SFGE N L VN N +TS
Sbjct: 125 KQLEKLGKVLKKNNVSIDIISFGEILVNRERLQALVNAANNDNTS 169
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 500 FRIGVDPNVDPELALALRVSM 562
F G+DPN DPEL +ALR+SM
Sbjct: 214 FEFGIDPNADPELYMALRMSM 234
>UniRef50_Q5KP07 Cluster: RPN10-like protein, putative; n=2;
Filobasidiella neoformans|Rep: RPN10-like protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 371
Score = 83.4 bits (197), Expect = 6e-15
Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLA--NVEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
KT +NPE+ VG++T+A + +L T T+D+GR+M L +V + L T I IA LALK
Sbjct: 40 KTDANPESAVGMMTMAGNSPSLLVTPTNDLGRLMHALSKVLVSNTAQLSTAISIAQLALK 99
Query: 175 HRQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTVML 300
HR+ KN + RIV+FVGSP+ + LV G R RK+ V +
Sbjct: 100 HRENKNQRQRIVIFVGSPLGESAESLVK--LGKRLRKNNVFV 139
Score = 35.5 bits (78), Expect = 1.7
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 255 KLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTG-GSHLVSVPAG 413
KL KRL+K V DVV+FG++ +N L G + G S+LVSVP+G
Sbjct: 127 KLGKRLRKNNVFVDVVTFGDEGRDND------EKLRGLVEAVGEESNLVSVPSG 174
>UniRef50_P38886 Cluster: 26S proteasome regulatory subunit RPN10;
n=12; Dikarya|Rep: 26S proteasome regulatory subunit
RPN10 - Saccharomyces cerevisiae (Baker's yeast)
Length = 268
Score = 83.4 bits (197), Expect = 6e-15
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLA--NVEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
K SNPEN VGL++ A N VL+T T++ G+I++ LH Q G +++ T ++IA L LK
Sbjct: 40 KRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLK 99
Query: 175 HRQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTVMLFRLERIQKTT 330
HRQ K RIV FV SP++ EL+ K ++ V + I++ T
Sbjct: 100 HRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQNT 151
Score = 44.0 bits (99), Expect = 0.005
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 255 KLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAG 413
+LAK LKK V D+++FGE +N LL F+ +N T SHL++V G
Sbjct: 127 RLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEET--SHLLTVTPG 177
Score = 34.7 bits (76), Expect = 2.9
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +2
Query: 509 GVDPNVDPELALALRVSM 562
GVDP++DPELA+ALR+SM
Sbjct: 219 GVDPSMDPELAMALRLSM 236
>UniRef50_Q2UCW0 Cluster: RIB40 genomic DNA, SC012; n=5;
Pezizomycotina|Rep: RIB40 genomic DNA, SC012 -
Aspergillus oryzae
Length = 240
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 RSNPENNVGLLTLANV--EVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHR 180
R +P++ VGL+++ EVL+T TSD G I++ LHR + +G +L + I++A LALKHR
Sbjct: 2 RVHPQSAVGLMSMGGKGPEVLSTFTSDFGAILAGLHRTKIHGTAHLSSSIQVAGLALKHR 61
Query: 181 QGKNHKMRIVVFVGSPVNTDEKELV 255
K+ + RI+VF SP+ DEK LV
Sbjct: 62 SEKSQRQRIIVFSCSPIEEDEKSLV 86
Score = 47.2 bits (107), Expect = 5e-04
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 165 SFKTPSGKESQDAHSSFCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGE-DSENNPLLT 341
+ K S K + F P + K KLAK++KK V+ DV++FG+ +S+ L
Sbjct: 57 ALKHRSEKSQRQRIIVFSCSPIEEDEKSLVKLAKKMKKINVSIDVIAFGDLESDQTKKLE 116
Query: 342 TFVNTLNGKDTSTGGSHLVSVPAGGCVVLSEALIT 446
FV + G D GSHL +P G ++ E +T
Sbjct: 117 AFVENVKGGD----GSHLAIIPPGPNLLSEELQMT 147
>UniRef50_Q7RH03 Cluster: 26s proteasome regulatory subunit s5a
(Multiubiquitin chain binding protein). [mouse-ear
cress-related; n=3; Plasmodium (Vinckeia)|Rep: 26s
proteasome regulatory subunit s5a (Multiubiquitin chain
binding protein). [mouse-ear cress-related - Plasmodium
yoelii yoelii
Length = 461
Score = 77.0 bits (181), Expect = 6e-13
Identities = 31/88 (35%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN--VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
KT + +N++G+L +A +++ +LT+D+G+++S +H ++ G +++ + IA LALK
Sbjct: 60 KTSMHYKNSIGVLVMAGDGIKIKVSLTNDIGQLLSCIHGIKIEGSCDIIRSLLIAQLALK 119
Query: 175 HRQGKNHKMRIVVFVGSPVNTDEKELVN 258
HR KN + +I++F+GSP+ +EK+L++
Sbjct: 120 HRIDKNLEQKIIIFIGSPIEANEKQLIS 147
>UniRef50_Q553E0 Cluster: VWFA domain-containing protein; n=2;
Dictyostelium discoideum|Rep: VWFA domain-containing
protein - Dictyostelium discoideum AX4
Length = 349
Score = 76.2 bits (179), Expect = 1e-12
Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLANV--EVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
KT+SNPE+ V ++++A EVL TLT ++ +I+S ++ NG I+ T ++IA LAL+
Sbjct: 40 KTQSNPESAVSIMSMAGKKPEVLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALR 99
Query: 175 HRQGKNHKMRIVVFVGSPVNTDEKELV 255
HRQ + RI+ FVGSP+ ++EL+
Sbjct: 100 HRQNNHQHPRIIAFVGSPLKETKEELI 126
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +3
Query: 210 SFCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGS 389
+F P + ++ +LAKRLKK V D+++FGE +EN+ L F+N +N D S
Sbjct: 112 AFVGSPLKETKEELIQLAKRLKKNGVAVDIINFGEVTENSDKLEAFINDVNNNDE----S 167
Query: 390 HLVSVPAGGCVVLSEALITS 449
HL++VP G +LS+ ++ S
Sbjct: 168 HLLTVPPGP-HILSDIILQS 186
>UniRef50_A5KAC7 Cluster: 26S proteasome non-ATPase regulatory
subunit 4, putative; n=4; Plasmodium|Rep: 26S proteasome
non-ATPase regulatory subunit 4, putative - Plasmodium
vivax
Length = 482
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/102 (35%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN--VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
KT + +NN+G++ +A +V +LT+D+G+++S +H ++ +G +++ + IA LALK
Sbjct: 41 KTSMHYKNNIGIVMMAGDKTKVKVSLTNDIGQLLSCIHEIKLDGTCDIVRSLLIAQLALK 100
Query: 175 HRQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTVML 300
HR KN +I++FVGSP+ +EK+L++ G + +K+ + L
Sbjct: 101 HRVDKNLGQKIMLFVGSPLKVNEKQLIS--TGKQLKKNNICL 140
>UniRef50_Q7XGY3 Cluster: 26S proteasome regulatory subunit S5A,
putative; n=6; Oryza sativa|Rep: 26S proteasome
regulatory subunit S5A, putative - Oryza sativa subsp.
japonica (Rice)
Length = 550
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN--VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
K SNPEN VG+L +A V VL TSD + ++ +H ++ +G+ NL + IA L LK
Sbjct: 42 KMTSNPENTVGVLAMAGDRVRVLLAPTSDPVKFLACMHGLEASGEANLTATLNIAELVLK 101
Query: 175 HRQGKNHKMRIVVFVGSPVNTDEKELV 255
+R K RIVVFVGSPV ++ E +
Sbjct: 102 NRPDKRLSQRIVVFVGSPVKDEKLETI 128
Score = 34.7 bits (76), Expect = 2.9
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 LAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGG-SHLVSVPAG 413
+ K+LKK V+ DVV FGE + P L + GG SH+V +P G
Sbjct: 128 IGKKLKKYNVSLDVVEFGESDDEKP------EKLEALVAAVGGSSHIVHIPPG 174
>UniRef50_UPI00006CFB2F Cluster: Ubiquitin interaction motif family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ubiquitin interaction motif family protein - Tetrahymena
thermophila SB210
Length = 392
Score = 68.9 bits (161), Expect = 1e-10
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN--VEVLATLTSDVGRIMSKLHRVQPNGD-INLLTGIRIAHLAL 171
K + N EN VG+LT+ VEVL T ++D I+ L V+ G+ + L ++IA L L
Sbjct: 40 KQQMNMENAVGILTMGGPQVEVLITPSADPDAILGCLFGVKLRGEKAHFLNALQIAQLGL 99
Query: 172 KHRQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTVMLFRL 309
KHR+ KN + RI+VFV SP+ DEK L K ++ +V + L
Sbjct: 100 KHRKNKNMRQRIIVFVASPIVEDEKTLERVAKQLKKNNVSVDIVNL 145
>UniRef50_UPI0000499B9D Cluster: proteasome regulatory subunit; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 302
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLANVE--VLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALK 174
+ R NPEN+VG + + +L TLT D G+I+S LH + G + + +A LAL
Sbjct: 39 RLRKNPENHVGFIAAGSESKRILVTLTGDFGKILSGLHEAKIGGSSDFKQALLVAKLALA 98
Query: 175 HRQGKNHKMRIVVFVGSP--VNTDEKE-LVN*LK 267
+R K + RI++FVGSP +N+DE + +VN LK
Sbjct: 99 NRVDKIYTQRIILFVGSPLNINSDEAQTMVNLLK 132
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 270 LKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAGGCVVL 428
LKK + D+VSFGE +N P++ F + + G D + LV+VPAG ++L
Sbjct: 131 LKKSNIALDIVSFGEVVDNAPVIELFPSQM-GDDCT-----LVTVPAGPHILL 177
>UniRef50_UPI00005A2BB8 Cluster: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 4 (26S
proteasome regulatory subunit S5A) (Rpn10)
(Multiubiquitin chain binding protein) (Antisecretory
factor-1) (AF) (ASF); n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 26S proteasome non-ATPase
regulatory subunit 4 (26S proteasome regulatory subunit
S5A) (Rpn10) (Multiubiquitin chain binding protein)
(Antisecretory factor-1) (AF) (ASF) - Canis familiaris
Length = 205
Score = 62.9 bits (146), Expect = 1e-08
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +3
Query: 225 PCQH*RKGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSV 404
P + K KLAKR KKEKV D++S G++ N LT FVNTL G D + GS LV+V
Sbjct: 10 PVEDNEKDLVKLAKRFKKEKVYVDIISLGKEEVNTEKLTAFVNTLKGNDGT--GSPLVAV 67
Query: 405 PAGGCVVLSEALITS 449
P G L++ALI+S
Sbjct: 68 PPGPS--LADALISS 80
Score = 33.9 bits (74), Expect = 5.1
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 500 FRIGVDPNVDPELALALRV 556
F GVDP+ DP+LALALRV
Sbjct: 98 FEFGVDPSADPQLALALRV 116
>UniRef50_Q4QIH4 Cluster: Proteasome regulatory non-ATP-ase subunit,
putative; n=7; Trypanosomatidae|Rep: Proteasome
regulatory non-ATP-ase subunit, putative - Leishmania
major
Length = 346
Score = 60.9 bits (141), Expect = 4e-08
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN--VEVLATLTSDVGRIMSKLHRVQPNGD-INLLTGIRIAHLAL 171
K ++N EN +G LT V TLT++V IM+ + + NG N +G++IA LAL
Sbjct: 39 KLQANAENTLGFLTTGGNACTVYETLTNNVDAIMTSIGSIPVNGKRCNFSSGLQIASLAL 98
Query: 172 KHRQGKNHKMRIVVFVGSPVNTDEKEL 252
HR + RIV FVGSP+ EL
Sbjct: 99 SHRTNSRAEKRIVAFVGSPIGETAAEL 125
Score = 36.7 bits (81), Expect = 0.72
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 509 GVDPNVDPELALALRVSM 562
GVDPN+DPELA+ALR+SM
Sbjct: 207 GVDPNMDPELAMALRLSM 224
Score = 35.1 bits (77), Expect = 2.2
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 258 LAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTS 377
LAK+L+K+ V DVV+FG +S N LL FV ++ K+ S
Sbjct: 128 LAKKLRKDDVAVDVVAFGVES-NVELLQAFVKKVSKKENS 166
>UniRef50_Q4U9U3 Cluster: Putative uncharacterized protein; n=3;
Piroplasmida|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 332
Score = 58.8 bits (136), Expect = 2e-07
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 19 ENNVGLLTLANV--EVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKN 192
EN+VG++ LA ++L ++D+G ++ L V P+ + + GI+ A LALKHR K+
Sbjct: 46 ENSVGIVCLARKGSQLLTAPSNDLGTFLTDLQTVVPHSQSDFIRGIQTAQLALKHRLNKS 105
Query: 193 HKMRIVVFVGSPVNTDEKELV 255
+ RI+ FV SP+ K V
Sbjct: 106 QQQRIICFVASPIVEPVKHFV 126
Score = 35.1 bits (77), Expect = 2.2
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 255 KLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAGGCVVLSE 434
KL K LKK V D++ +SE L T + +N DTS +L P G +LS+
Sbjct: 127 KLGKLLKKNNVILDIIDISNNSETEEKLKTLHSAVNNNDTS---HYLCCKPCSG-TLLSD 182
Query: 435 ALITS 449
+ S
Sbjct: 183 MIFNS 187
>UniRef50_A0BVM1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_130,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 365
Score = 57.2 bits (132), Expect = 5e-07
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = +1
Query: 10 SNPENNVGLLTLAN--VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQ 183
SN E+ +GL+ V +L T T+D I + H+ + G++ I+ A LALKHR
Sbjct: 43 SNMESGMGLILGGGKQVRLLMTPTNDRDLIQGQFHKTRLEGNLKFSVAIQQAQLALKHRI 102
Query: 184 GKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTVML 300
K RIV FV SP+ + LVN K R +K+ + +
Sbjct: 103 NKQQHQRIVAFVASPIEEEVDTLVNLAK--RLKKNNIAI 139
Score = 33.9 bits (74), Expect = 5.1
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 258 LAKRLKKEKVNCDVVSFGEDSENN--PLLTTFVNTLNGKDT 374
LAKRLKK + D+++FGE +E++ L T F N G+ +
Sbjct: 128 LAKRLKKNNIAIDLINFGEQNEDHLKKLKTFFDNVQKGQSS 168
>UniRef50_A2EVI3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 253
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 10 SNPENNVGLLTLANVE--VLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQ 183
SNP++ +G++T+ + E + +LTS I+ L ++P G + L ++ + LK+
Sbjct: 45 SNPKSQIGIVTMGSKEFGLRTSLTSSHTTILKTLQNIKPGGSLYFLKALKTIMIMLKYCN 104
Query: 184 GKNHKMRIVVFVGSPVNTDEKELVN 258
+ R++ F+G ++KE N
Sbjct: 105 TDVEEKRVLAFIGGDHGINDKEKAN 129
>UniRef50_A2EEG1 Cluster: Ubiquitin interaction motif family
protein; n=1; Trichomonas vaginalis G3|Rep: Ubiquitin
interaction motif family protein - Trichomonas vaginalis
G3
Length = 406
Score = 38.7 bits (86), Expect = 0.18
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 7 RSNPENNVGLLTLA--NVEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHR 180
+++ +N + T+ N + +L D+ ++ L + G+I IR LAL+HR
Sbjct: 44 KNSAKNQFAVATIGSGNFGIQLSLCKDMIKVSHALDAITIGGEIRFENAIRCGFLALRHR 103
Query: 181 QGKNHKMRIVVFVGS 225
+ RIV+FVGS
Sbjct: 104 DQEVSIKRIVIFVGS 118
>UniRef50_UPI0000F1FF43 Cluster: PREDICTED: similar to
phosphatidylinositol-4-phosphate 5-kinase, type 1 beta;
n=1; Danio rerio|Rep: PREDICTED: similar to
phosphatidylinositol-4-phosphate 5-kinase, type 1 beta -
Danio rerio
Length = 292
Score = 35.9 bits (79), Expect = 1.3
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 15/64 (23%)
Frame = +2
Query: 692 DAMELSEEEQIALAMQMSMQ-QEAPG*RELDV--------------SEEYAEVMNDPAFL 826
D ++E+EQIA A+QMSMQ E G +DV EE +VM DP FL
Sbjct: 191 DFSRMTEDEQIAYALQMSMQGGEFGGSEAMDVDTAAAAAESEAPKEDEEDYDVMQDPEFL 250
Query: 827 QSVL 838
QSVL
Sbjct: 251 QSVL 254
>UniRef50_A2EQF8 Cluster: 26S proteasome regulatory subunit
S5-related protein; n=1; Trichomonas vaginalis G3|Rep:
26S proteasome regulatory subunit S5-related protein -
Trichomonas vaginalis G3
Length = 255
Score = 34.3 bits (75), Expect = 3.8
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +1
Query: 7 RSNPENNVGLLTLANVE--VLATLTSDVGRIMSKLHRVQPNGD-INLLTGIRIAHLALKH 177
+SN + VG++T++ E + ++ T+ I + + ++ + I++L G++ A LALK+
Sbjct: 44 QSNQNSQVGIITMSRPEFGIRSSPTTKPNNIANSIPNIKRGKEPIDILLGVKSAILALKN 103
Query: 178 RQGKNHKMRIVVFVGSP-VNTDE 243
+ RI++FV S + TDE
Sbjct: 104 CIPIPSEKRILIFVSSDCLMTDE 126
>UniRef50_Q23A27 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 919
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 259 SLRVPFRQC*QGNRQKLLCAS--CDSFPDGVLKLNV 158
+L+V FRQC G QK +S CD PDG LNV
Sbjct: 656 NLKVDFRQCITGEVQKQFFSSIICDQCPDGKYSLNV 691
>UniRef50_Q02A45 Cluster: Von Willebrand factor, type A precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Von Willebrand
factor, type A precursor - Solibacter usitatus (strain
Ellin6076)
Length = 311
Score = 33.5 bits (73), Expect = 6.7
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +1
Query: 10 SNPENNVGLLTL-ANVEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQG 186
SNPE+ L+ ++ ++ LTSD G I L + +G LL I +A +KH +
Sbjct: 119 SNPEDEFFLVEFDSSPRLVVPLTSDTGTIEDHLTFSRSHGSTALLDAIFLALHEMKHSK- 177
Query: 187 KNHKMRIVVFVGSPVNT--DEKELVN*LK 267
KN K +++ G ++ EKE+ + +K
Sbjct: 178 KNKKALLIISDGGDNHSRYSEKEVSSVVK 206
>UniRef50_Q0U378 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 458
Score = 33.5 bits (73), Expect = 6.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 473 CSITTYQRTCYQSLRKHNTASSWHRHKVTSPS 378
C+I T+Q TC +LR+ + RHK+T+ S
Sbjct: 15 CNIVTFQFTCQHTLRRRRSRCGGTRHKITANS 46
>UniRef50_A7CTN6 Cluster: Putative uncharacterized protein
precursor; n=1; Opitutaceae bacterium TAV2|Rep: Putative
uncharacterized protein precursor - Opitutaceae
bacterium TAV2
Length = 477
Score = 33.1 bits (72), Expect = 8.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 273 KKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAG 413
K+ ++ D + G SENN + T L+ +D + G + LV VP G
Sbjct: 39 KESRITMDPIPPGPYSENNTIAITLRYHLSPRDAAAGDTRLVLVPLG 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,451,778
Number of Sequences: 1657284
Number of extensions: 13854957
Number of successful extensions: 36138
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 34794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36115
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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