Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1621
(838 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease r... 147 2e-35
AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p pro... 147 2e-35
AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA... 147 2e-35
AE014297-858|AAF54325.2| 643|Drosophila melanogaster CG11984-PC... 29 7.9
AE014297-857|AAF54323.2| 643|Drosophila melanogaster CG11984-PB... 29 7.9
AE014297-856|AAF54324.2| 643|Drosophila melanogaster CG11984-PA... 29 7.9
>S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease
regulatory complexnon-ATPase subunit protein.
Length = 396
Score = 147 bits (356), Expect = 2e-35
Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN-VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKH 177
K RSNPENNVGL+TL+N VEVLATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKH
Sbjct: 40 KLRSNPENNVGLMTLSNTVEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKH 99
Query: 178 RQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTV 294
RQGKNHKMRIVVFVGSP+N +E +LV K ++ K V
Sbjct: 100 RQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNV 138
Score = 83.4 bits (197), Expect = 3e-16
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +3
Query: 171 KTPSGKESQDAHSSFCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFV 350
K GK + F P H K AKRLKKEKVN D+VSFG+ NN +LT F+
Sbjct: 98 KHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFI 157
Query: 351 NTLNGKDTSTGGSHLVSVPAGGCVVLSEALITS 449
N LNGKD + GSHLVSVP G VLS+AL++S
Sbjct: 158 NALNGKDGT--GSHLVSVPRGS--VLSDALLSS 186
Score = 47.6 bits (108), Expect = 2e-05
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 14/63 (22%)
Frame = +2
Query: 692 DAMELSEEEQIALAMQMSMQ--------QEA--PG*RE----LDVSEEYAEVMNDPAFLQ 829
D ++EEEQIA AMQMSMQ Q+A P E +DV E+Y+EV+ DPAFLQ
Sbjct: 298 DFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQ 357
Query: 830 SVL 838
SVL
Sbjct: 358 SVL 360
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 500 FRIGVDPNVDPELALALRVSM 562
F GVDPN DPELALALRVSM
Sbjct: 205 FEFGVDPNEDPELALALRVSM 225
>AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p
protein.
Length = 433
Score = 147 bits (356), Expect = 2e-35
Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN-VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKH 177
K RSNPENNVGL+TL+N VEVLATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKH
Sbjct: 77 KLRSNPENNVGLMTLSNTVEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKH 136
Query: 178 RQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTV 294
RQGKNHKMRIVVFVGSP+N +E +LV K ++ K V
Sbjct: 137 RQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNV 175
Score = 83.4 bits (197), Expect = 3e-16
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +3
Query: 171 KTPSGKESQDAHSSFCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFV 350
K GK + F P H K AKRLKKEKVN D+VSFG+ NN +LT F+
Sbjct: 135 KHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFI 194
Query: 351 NTLNGKDTSTGGSHLVSVPAGGCVVLSEALITS 449
N LNGKD + GSHLVSVP G VLS+AL++S
Sbjct: 195 NALNGKDGT--GSHLVSVPRGS--VLSDALLSS 223
Score = 47.6 bits (108), Expect = 2e-05
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 14/63 (22%)
Frame = +2
Query: 692 DAMELSEEEQIALAMQMSMQ--------QEA--PG*RE----LDVSEEYAEVMNDPAFLQ 829
D ++EEEQIA AMQMSMQ Q+A P E +DV E+Y+EV+ DPAFLQ
Sbjct: 335 DFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQ 394
Query: 830 SVL 838
SVL
Sbjct: 395 SVL 397
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 500 FRIGVDPNVDPELALALRVSM 562
F GVDPN DPELALALRVSM
Sbjct: 242 FEFGVDPNEDPELALALRVSM 262
>AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA
protein.
Length = 396
Score = 147 bits (356), Expect = 2e-35
Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Frame = +1
Query: 1 KTRSNPENNVGLLTLAN-VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKH 177
K RSNPENNVGL+TL+N VEVLATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKH
Sbjct: 40 KLRSNPENNVGLMTLSNTVEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKH 99
Query: 178 RQGKNHKMRIVVFVGSPVNTDEKELVN*LKG*RRRKSTV 294
RQGKNHKMRIVVFVGSP+N +E +LV K ++ K V
Sbjct: 100 RQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNV 138
Score = 83.4 bits (197), Expect = 3e-16
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +3
Query: 171 KTPSGKESQDAHSSFCRFPCQH*RKGTRKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFV 350
K GK + F P H K AKRLKKEKVN D+VSFG+ NN +LT F+
Sbjct: 98 KHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFI 157
Query: 351 NTLNGKDTSTGGSHLVSVPAGGCVVLSEALITS 449
N LNGKD + GSHLVSVP G VLS+AL++S
Sbjct: 158 NALNGKDGT--GSHLVSVPRGS--VLSDALLSS 186
Score = 47.6 bits (108), Expect = 2e-05
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 14/63 (22%)
Frame = +2
Query: 692 DAMELSEEEQIALAMQMSMQ--------QEA--PG*RE----LDVSEEYAEVMNDPAFLQ 829
D ++EEEQIA AMQMSMQ Q+A P E +DV E+Y+EV+ DPAFLQ
Sbjct: 298 DFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQ 357
Query: 830 SVL 838
SVL
Sbjct: 358 SVL 360
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 500 FRIGVDPNVDPELALALRVSM 562
F GVDPN DPELALALRVSM
Sbjct: 205 FEFGVDPNEDPELALALRVSM 225
>AE014297-858|AAF54325.2| 643|Drosophila melanogaster CG11984-PC,
isoform C protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 118 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 213
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
>AE014297-857|AAF54323.2| 643|Drosophila melanogaster CG11984-PB,
isoform B protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 118 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 213
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
>AE014297-856|AAF54324.2| 643|Drosophila melanogaster CG11984-PA,
isoform A protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 118 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 213
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,080,229
Number of Sequences: 53049
Number of extensions: 684590
Number of successful extensions: 1747
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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