BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1620 (683 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_04_0471 - 18121023-18121213,18121954-18122080,18122221-181222... 33 0.16 05_05_0323 - 24098962-24099866,24099941-24100442 30 2.0 10_08_0898 + 21424379-21424792,21424974-21425723 29 2.6 05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 29 2.6 08_02_1364 - 26415278-26415319,26415399-26415518,26415739-264158... 29 3.4 12_02_0137 + 14153603-14153629,14154136-14154586,14155066-141552... 28 6.0 09_02_0626 + 11352690-11353078,11353106-11354006 28 6.0 08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578... 28 6.0 03_05_0346 + 23335753-23335854,23336268-23336473,23336530-233367... 28 6.0 06_03_1460 - 30312640-30313116,30313457-30313708,30313808-303139... 28 7.9 04_03_0372 + 15068405-15070000 28 7.9 >11_04_0471 - 18121023-18121213,18121954-18122080,18122221-18122253, 18122969-18123009,18123415-18123484,18123626-18123744, 18123876-18123942,18124735-18124809,18125023-18125050, 18125130-18125179,18125679-18125741,18125829-18125870, 18126000-18126078,18127233-18127368,18128013-18128517, 18129238-18129372 Length = 586 Score = 33.5 bits (73), Expect = 0.16 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +3 Query: 240 QAIARNQWIDIQIARLADSVSMEINLVRSFERRLDRPAESIR 365 Q+ AR + ++ Q+A L D +SME+ L++ E L R + IR Sbjct: 309 QSEARTRELEKQVANLGDGLSMEVKLMKRREEMLVRKEQEIR 350 >05_05_0323 - 24098962-24099866,24099941-24100442 Length = 468 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = -1 Query: 464 ILNASAEAAADAGVRVHYHGGIVDSAHEHRSLEPDAFSRSIQTSLEAAY 318 +L +A AAA+ GVR+ +V S H R+ + F R++ T +EA + Sbjct: 53 LLGGAAAAAAEGGVRLEAIPNVVPSEH-GRAGDMLGFVRAVYTRMEAPF 100 >10_08_0898 + 21424379-21424792,21424974-21425723 Length = 387 Score = 29.5 bits (63), Expect = 2.6 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = -1 Query: 470 HDILNASAEAAADAGVRVHYHGGIVDSAHEHRSLEPDAFSRSIQTSL 330 HD ASA AAA AG H+H + E P A S QTS+ Sbjct: 83 HDFFPASAAAAA-AGDHGHHHHHHIGGMGEPSGATPSATSSDHQTSM 128 >05_06_0276 + 26878732-26879574,26879920-26880387,26880800-26881021, 26881153-26881278,26881309-26881573,26881719-26881936 Length = 713 Score = 29.5 bits (63), Expect = 2.6 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +1 Query: 244 PLPATNGSTFRSPASRIPSPWRST*YAASRDVWIDRLKASGSRLRCSWAESTIP 405 P+ +T+ RSP R SP RS + R DR+K + SW+ S P Sbjct: 49 PVKSTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDRVKEQVRSPKQSWSRSPSP 102 >08_02_1364 - 26415278-26415319,26415399-26415518,26415739-26415825, 26416273-26416443,26416535-26416738 Length = 207 Score = 29.1 bits (62), Expect = 3.4 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -1 Query: 461 LNASAEAAADAGVRVHYHGGIVDSAHEHRSLE--PDAFSRSIQTSLEAAY*VDLHGDGIR 288 + ASA AAA A + H H ++ A S+E A R+ +T L+AA + D + Sbjct: 1 MEASASAAAAAALWGHKHLPLLARASSKESVEYILQALWRTRRTGLDAADRAVVR-DMLH 59 Query: 287 EAGDLNVDPLV 255 A D ++DPL+ Sbjct: 60 LASDADLDPLL 70 >12_02_0137 + 14153603-14153629,14154136-14154586,14155066-14155260, 14155366-14155628,14155964-14156104,14156188-14156283, 14156672-14156749,14157134-14157194,14157324-14157511, 14158441-14158569 Length = 542 Score = 28.3 bits (60), Expect = 6.0 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +1 Query: 22 SAFLAINAPPPSRSMKMSLKIRAATPVTDGIIMYCAESSR 141 SA +A+ +PPP L++ AA V G+++ E R Sbjct: 131 SAAVALASPPPGWVQGEDLRLNAAAAVASGVVLGLHEDRR 170 >09_02_0626 + 11352690-11353078,11353106-11354006 Length = 429 Score = 28.3 bits (60), Expect = 6.0 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -1 Query: 440 AADAGVRVHYHGGIVD--SAHEHRSLEPDAFSRSIQTSLEA 324 A D RV GI+D +AHE R+ E DA R+ +LEA Sbjct: 33 AKDLAERVRDARGILDVAAAHERRASEADASLRAWTAALEA 73 >08_02_0823 + 21557111-21557292,21557391-21557473,21557722-21557810, 21557985-21558058,21558264-21558314,21558406-21558482, 21560206-21560900 Length = 416 Score = 28.3 bits (60), Expect = 6.0 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 1/93 (1%) Frame = -1 Query: 602 HSNRNLRYRIGRTPTPEYRRGRTCCTLECSTINR*VYVDGVAIQHDILNASAEAAADAGV 423 H N RIGR +Y T T E + + Y D AI+H LNA + + Sbjct: 162 HHNGKWEARIGRVFGNKYLYLGTYATQEEAAV---AY-DIAAIEHRGLNAVTNFDINLYI 217 Query: 422 RVHYHGGI-VDSAHEHRSLEPDAFSRSIQTSLE 327 R YHG SA ++E D F+ +I +L+ Sbjct: 218 R-WYHGSCRSSSAAAATTIEDDDFAEAIAAALQ 249 >03_05_0346 + 23335753-23335854,23336268-23336473,23336530-23336705, 23336832-23337064,23337546-23337963,23338045-23338262, 23338905-23339168 Length = 538 Score = 28.3 bits (60), Expect = 6.0 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +3 Query: 264 IDIQIARLADSV-SMEINLVRSFERRLDRPAESIRFETPMFVGGVDDSTV 410 +D QIA + V S NL ++ E +LD + IR E P++V + S V Sbjct: 183 VDPQIAPMPGYVLSRGTNLSQAHEEKLDMLVQEIRPEIPLYVTTMKHSNV 232 >06_03_1460 - 30312640-30313116,30313457-30313708,30313808-30313938, 30314037-30314322 Length = 381 Score = 27.9 bits (59), Expect = 7.9 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = -1 Query: 368 EPDAFSRSIQTSLEAAY*VDLHGDGIREAGDLNVDPLVAGNGLSLVSTTG 219 E +AF S+ ++ AA +L+G G R+ G +NV P+ + + + TG Sbjct: 206 EVEAFYTSLISNYSAAI-TELYGMGARKFGIINVGPVGCVPSVRVANATG 254 >04_03_0372 + 15068405-15070000 Length = 531 Score = 27.9 bits (59), Expect = 7.9 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = -1 Query: 179 PFRTVSEVKPPYPRDDSAQYMMMPSVTGVAA--LIFSDIFMERDGGGA 42 P+R + ++PP+PR+ +P G A + +F+ DGGGA Sbjct: 153 PYR-YTVLRPPHPRESVQLLPPLPPPPGGGAGKHVVERVFLPEDGGGA 199 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,697,275 Number of Sequences: 37544 Number of extensions: 474367 Number of successful extensions: 1704 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1641 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1703 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1733104716 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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