Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1616
         (832 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.70 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.6  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   2.1  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   2.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.1  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         25   3.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   6.5  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +3

Query: 627 IRMEGAIGSPG-GFPTYPGAPDPQPTYTEPP 716
           +R  G +G P  G PT P  P P   Y +PP
Sbjct: 192 MRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = +3

Query: 639 GAIGSPG--GFPTYPGAPDPQPTYTEP--PFSQTAGNTGN 746
           G++G PG  G   YPG P P+    EP  P     G  GN
Sbjct: 471 GSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQKGN 510



 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 639 GAIGSPGGFPTYPGAPDPQ 695
           G  G+PGG    PGAP P+
Sbjct: 398 GPAGAPGGGEGRPGAPGPK 416


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
            protease protein.
          Length = 1322

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 164  SCDRQGGMLAVQRDCNGLHIIQGLAY*L*WEDHCVY 271
            SCD   G   V  +  GLH + G+     W  HC Y
Sbjct: 1260 SCDGDSGGPLVCPNSEGLHTLTGIVS---WGKHCGY 1292


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
            protein.
          Length = 1322

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 164  SCDRQGGMLAVQRDCNGLHIIQGLAY*L*WEDHCVY 271
            SCD   G   V  +  GLH + G+     W  HC Y
Sbjct: 1260 SCDGDSGGPLVCPNSEGLHTLTGIVS---WGKHCGY 1292


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 677  RGSRPAAYLHRTSLLTDSWKHRKHG 751
            R SR   + HR      SW+ RKHG
Sbjct: 961  RASRYVRWAHRVIPDVGSWQSRKHG 985


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -1

Query: 619 RTPHQRPCGTVGKRRKRRPPKQIW--RRSRM 533
           R    RP  T   RR  RPP   W  RRSR+
Sbjct: 11  RASPSRPILTTRGRRWPRPPTSCWPSRRSRL 41


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
 Frame = +3

Query: 654 PGGFPTYPG-----APDPQPTYTEPPFSQTAGNTG 743
           P GFP  P      AP P P    PP     G  G
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLG 604


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 683 SRPAAYLHRTSLLTDSWKHRKHG 751
           SR   + HR      SW+ RKHG
Sbjct: 888 SRHTRWAHRVLPNIGSWQSRKHG 910


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 924,187
Number of Sequences: 2352
Number of extensions: 20757
Number of successful extensions: 46
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)