BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1616 (832 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 27 0.70 AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 26 1.6 AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 2.1 AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 25 2.1 AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 25 2.1 AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein. 25 3.7 DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 6.5 AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 24 6.5 >AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule binding protein protein. Length = 838 Score = 27.1 bits (57), Expect = 0.70 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +3 Query: 627 IRMEGAIGSPG-GFPTYPGAPDPQPTYTEPP 716 +R G +G P G PT P P P Y +PP Sbjct: 192 MRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222 >AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1 chain precursor protein. Length = 801 Score = 25.8 bits (54), Expect = 1.6 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 4/40 (10%) Frame = +3 Query: 639 GAIGSPG--GFPTYPGAPDPQPTYTEP--PFSQTAGNTGN 746 G++G PG G YPG P P+ EP P G GN Sbjct: 471 GSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQKGN 510 Score = 25.4 bits (53), Expect = 2.1 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 639 GAIGSPGGFPTYPGAPDPQ 695 G G+PGG PGAP P+ Sbjct: 398 GPAGAPGGGEGRPGAPGPK 416 >AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine protease protein. Length = 1322 Score = 25.4 bits (53), Expect = 2.1 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +2 Query: 164 SCDRQGGMLAVQRDCNGLHIIQGLAY*L*WEDHCVY 271 SCD G V + GLH + G+ W HC Y Sbjct: 1260 SCDGDSGGPLVCPNSEGLHTLTGIVS---WGKHCGY 1292 >AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D protein. Length = 1322 Score = 25.4 bits (53), Expect = 2.1 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +2 Query: 164 SCDRQGGMLAVQRDCNGLHIIQGLAY*L*WEDHCVY 271 SCD G V + GLH + G+ W HC Y Sbjct: 1260 SCDGDSGGPLVCPNSEGLHTLTGIVS---WGKHCGY 1292 >AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase protein. Length = 1201 Score = 25.4 bits (53), Expect = 2.1 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 Query: 677 RGSRPAAYLHRTSLLTDSWKHRKHG 751 R SR + HR SW+ RKHG Sbjct: 961 RASRYVRWAHRVIPDVGSWQSRKHG 985 >AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein. Length = 93 Score = 24.6 bits (51), Expect = 3.7 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%) Frame = -1 Query: 619 RTPHQRPCGTVGKRRKRRPPKQIW--RRSRM 533 R RP T RR RPP W RRSR+ Sbjct: 11 RASPSRPILTTRGRRWPRPPTSCWPSRRSRL 41 >DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. Length = 889 Score = 23.8 bits (49), Expect = 6.5 Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 5/35 (14%) Frame = +3 Query: 654 PGGFPTYPG-----APDPQPTYTEPPFSQTAGNTG 743 P GFP P AP P P PP G G Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLG 604 >AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase protein. Length = 1099 Score = 23.8 bits (49), Expect = 6.5 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = +2 Query: 683 SRPAAYLHRTSLLTDSWKHRKHG 751 SR + HR SW+ RKHG Sbjct: 888 SRHTRWAHRVLPNIGSWQSRKHG 910 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 924,187 Number of Sequences: 2352 Number of extensions: 20757 Number of successful extensions: 46 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 45 length of database: 563,979 effective HSP length: 64 effective length of database: 413,451 effective search space used: 87651612 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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