Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1616
(832 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071753-1|AAL49375.1| 241|Drosophila melanogaster RH60941p pro... 111 1e-24
AE013599-1776|AAF58329.1| 241|Drosophila melanogaster CG10808-P... 111 1e-24
AE013599-2123|AAS64847.1| 524|Drosophila melanogaster CG33464-P... 33 0.36
AY058486-1|AAL13715.1| 416|Drosophila melanogaster GM13876p pro... 31 1.5
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein. 31 1.5
AE014296-1806|AAF50165.3| 416|Drosophila melanogaster CG32056-P... 31 1.5
AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein... 31 2.6
AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT prot... 31 2.6
AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA... 31 2.6
AY069765-1|AAL39910.1| 177|Drosophila melanogaster RE01453p pro... 30 3.4
AE014298-1491|AAF47955.1| 177|Drosophila melanogaster CG15211-P... 30 3.4
>AY071753-1|AAL49375.1| 241|Drosophila melanogaster RH60941p
protein.
Length = 241
Score = 111 bits (266), Expect = 1e-24
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +2
Query: 254 EDHCVYNDDTNACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFW 433
+++C+YN D AC YG + V F+AS+ F+ GE+LFE+MSSVK+RK YV+AD+GFSA W
Sbjct: 64 KEYCLYNGDGMACKYGNMVGVFGFLASMGFMGGEFLFERMSSVKSRKRYVMADMGFSALW 123
Query: 434 AFLYFVGFCYLSNAWGKTEKPPIG 505
F+YFV F YL + W + PP+G
Sbjct: 124 TFMYFVAFLYLWSQWSSSAPPPLG 147
Score = 64.9 bits (151), Expect = 1e-10
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +3
Query: 135 FDPQAFIQRPHVIVRAVCWLFSVIVMGCISSKGWRTDSDGR 257
FDP F +P V++RA+CWLFSV+V GCISS+GW T+ DG+
Sbjct: 25 FDPLTFAMKPQVVIRALCWLFSVVVFGCISSEGW-TEKDGK 64
Score = 47.2 bits (107), Expect = 3e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 508 ANNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 633
A +M+ AI FC FSI +W CA A++RF +GA F A+E
Sbjct: 150 AGSMKTAIWFCLFSIVSWALCALMAYKRFLIGAGDEFTSAFE 191
>AE013599-1776|AAF58329.1| 241|Drosophila melanogaster CG10808-PA
protein.
Length = 241
Score = 111 bits (266), Expect = 1e-24
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +2
Query: 254 EDHCVYNDDTNACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFW 433
+++C+YN D AC YG + V F+AS+ F+ GE+LFE+MSSVK+RK YV+AD+GFSA W
Sbjct: 64 KEYCLYNGDGMACKYGNMVGVFGFLASMGFMGGEFLFERMSSVKSRKRYVMADMGFSALW 123
Query: 434 AFLYFVGFCYLSNAWGKTEKPPIG 505
F+YFV F YL + W + PP+G
Sbjct: 124 TFMYFVAFLYLWSQWSSSAPPPLG 147
Score = 64.9 bits (151), Expect = 1e-10
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +3
Query: 135 FDPQAFIQRPHVIVRAVCWLFSVIVMGCISSKGWRTDSDGR 257
FDP F +P V++RA+CWLFSV+V GCISS+GW T+ DG+
Sbjct: 25 FDPLTFAMKPQVVIRALCWLFSVVVFGCISSEGW-TEKDGK 64
Score = 47.2 bits (107), Expect = 3e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 508 ANNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 633
A +M+ AI FC FSI +W CA A++RF +GA F A+E
Sbjct: 150 AGSMKTAIWFCLFSIVSWALCALMAYKRFLIGAGDEFTSAFE 191
>AE013599-2123|AAS64847.1| 524|Drosophila melanogaster CG33464-PA
protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.36
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 531 NSALHVVRVPIGGFSVLPQALDK*QNPTKYKKAQNAEKP 415
N A+ ++ P+G S++ Q DK Q+P K + Q +KP
Sbjct: 138 NDAIKIISTPLGKVSIVYQQTDKDQSPDKDAQQQQQKKP 176
>AY058486-1|AAL13715.1| 416|Drosophila melanogaster GM13876p
protein.
Length = 416
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 645 IGSPGGFPTYPGAPDPQPTYTEPPFSQ 725
+G PGG P Y G P QP Y P Q
Sbjct: 91 MGGPGGQPPYAGGPGGQPPYVGGPGGQ 117
>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
Length = 2715
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 633 MEGAIGSPGGFPTYPGAPDPQPTY 704
++G G PGG P YPGA PQP Y
Sbjct: 1154 IDGYPGYPGGSP-YPGASGPQPDY 1176
>AE014296-1806|AAF50165.3| 416|Drosophila melanogaster CG32056-PA,
isoform A protein.
Length = 416
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 645 IGSPGGFPTYPGAPDPQPTYTEPPFSQ 725
+G PGG P Y G P QP Y P Q
Sbjct: 91 MGGPGGQPPYAGGPGGQPPYVGGPGGQ 117
>AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein
protein.
Length = 1384
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -3
Query: 209 YNHAEQPTYRPDDHMRPLNKSLRVKRASSFSTPIRTGSIHFSTPQLDN 66
++ AE+P + + +P +K +V++ TP+ G+I Q+D+
Sbjct: 978 FDFAEEPMFEDQGYKKPKSKPKKVQKRQMVRTPLDVGTIRALIGQVDS 1025
>AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT protein.
Length = 1384
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -3
Query: 209 YNHAEQPTYRPDDHMRPLNKSLRVKRASSFSTPIRTGSIHFSTPQLDN 66
++ AE+P + + +P +K +V++ TP+ G+I Q+D+
Sbjct: 978 FDFAEEPMFEDQGYKKPKSKPKKVQKRQMVRTPLDVGTIRALIGQVDS 1025
>AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA
protein.
Length = 1384
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -3
Query: 209 YNHAEQPTYRPDDHMRPLNKSLRVKRASSFSTPIRTGSIHFSTPQLDN 66
++ AE+P + + +P +K +V++ TP+ G+I Q+D+
Sbjct: 978 FDFAEEPMFEDQGYKKPKSKPKKVQKRQMVRTPLDVGTIRALIGQVDS 1025
>AY069765-1|AAL39910.1| 177|Drosophila melanogaster RE01453p
protein.
Length = 177
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = +2
Query: 284 NACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFLYFVGFCY 463
+A ++ + + VI+FI ++ ++ Y ++ +++ ++L +A LYF+GF
Sbjct: 72 SATSFFMFVIVISFIINI-LLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIV 130
Query: 464 LSNAWGKTEKPPIGTRT 514
W G+ T
Sbjct: 131 QLARWSDATGKGSGSNT 147
>AE014298-1491|AAF47955.1| 177|Drosophila melanogaster CG15211-PA
protein.
Length = 177
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = +2
Query: 284 NACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFLYFVGFCY 463
+A ++ + + VI+FI ++ ++ Y ++ +++ ++L +A LYF+GF
Sbjct: 72 SATSFFMFVIVISFIINI-LLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIV 130
Query: 464 LSNAWGKTEKPPIGTRT 514
W G+ T
Sbjct: 131 QLARWSDATGKGSGSNT 147
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,797,931
Number of Sequences: 53049
Number of extensions: 941614
Number of successful extensions: 3792
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3776
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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