BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1616 (832 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40417-10|AAA81418.2| 247|Caenorhabditis elegans Synaptogyrin f... 50 2e-06 AF079373-1|AAC27798.1| 247|Caenorhabditis elegans synaptogyrin ... 50 2e-06 U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 31 0.77 U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 30 1.8 U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 30 2.3 U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 30 2.3 U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 30 2.3 AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 30 2.3 AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 30 2.3 Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 29 3.1 Z83217-6|CAD59136.1| 128|Caenorhabditis elegans Hypothetical pr... 28 9.4 AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 28 9.4 AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 28 9.4 AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 28 9.4 AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 28 9.4 AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical ... 28 9.4 >U40417-10|AAA81418.2| 247|Caenorhabditis elegans Synaptogyrin family protein 1 protein. Length = 247 Score = 50.0 bits (114), Expect = 2e-06 Identities = 21/65 (32%), Positives = 37/65 (56%) Frame = +2 Query: 263 CVYNDDTNACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFL 442 C+Y ++ C++ + A ++ IV + +Q+SSV TR+ VLADL SA + + Sbjct: 60 CLYGRSSSTCSFATAVGFFAVCGAIVLIVLDAKMDQISSVPTRRRAVLADLVVSAIFTAI 119 Query: 443 YFVGF 457 + +GF Sbjct: 120 FLIGF 124 Score = 33.9 bits (74), Expect = 0.14 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 511 NNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 633 NN + I S AW AFFA++R+ G A P Y+ Sbjct: 147 NNAKFGILSALLSFLAWGGAAFFAWRRYEEGNQATHEPNYD 187 >AF079373-1|AAC27798.1| 247|Caenorhabditis elegans synaptogyrin homolog protein. Length = 247 Score = 50.0 bits (114), Expect = 2e-06 Identities = 21/65 (32%), Positives = 37/65 (56%) Frame = +2 Query: 263 CVYNDDTNACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFL 442 C+Y ++ C++ + A ++ IV + +Q+SSV TR+ VLADL SA + + Sbjct: 60 CLYGRSSSTCSFATAVGFFAVCGAIVLIVLDAKMDQISSVPTRRRAVLADLVVSAIFTAI 119 Query: 443 YFVGF 457 + +GF Sbjct: 120 FLIGF 124 Score = 33.9 bits (74), Expect = 0.14 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 511 NNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 633 NN + I S AW AFFA++R+ G A P Y+ Sbjct: 147 NNAKFGILSALLSFLAWGGAAFFAWRRYEEGNQATHEPNYD 187 >U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine-rich tetratricorepeat protein protein 1 protein. Length = 337 Score = 31.5 bits (68), Expect = 0.77 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +3 Query: 648 GSPGGFPTYPGAPDPQPTYTEPPFSQTA 731 G PGG P PG P+ Q EP Q A Sbjct: 243 GGPGGMPAMPGMPNMQNLMNEPGLMQAA 270 >U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein 172, isoform a protein. Length = 341 Score = 30.3 bits (65), Expect = 1.8 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +3 Query: 648 GSPGGFPTYPGAPDPQPTY 704 GS GG+ TYP AP PTY Sbjct: 111 GSSGGYGTYPPAPTVPPTY 129 >U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein 58 protein. Length = 305 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Frame = +3 Query: 639 GAIGSPG--GFPTYPGAPDPQPTYTEPPFSQTAGNTGNMDYTALRI 770 G G PG G P YPG P +P F GN GN RI Sbjct: 185 GLDGIPGRHGTPGYPGEPGLPGPVGDPGFDGKPGNPGNNGVRVRRI 230 >U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like protein 1, isoformb protein. Length = 937 Score = 29.9 bits (64), Expect = 2.3 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Frame = +3 Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755 P P G+ G + G +PGGF T G P +PP S+T+ GN++ Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624 Query: 756 TALRI 770 RI Sbjct: 625 KPERI 629 >U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like protein 1, isoforma protein. Length = 1009 Score = 29.9 bits (64), Expect = 2.3 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Frame = +3 Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755 P P G+ G + G +PGGF T G P +PP S+T+ GN++ Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624 Query: 756 TALRI 770 RI Sbjct: 625 KPERI 629 >AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor protein. Length = 1009 Score = 29.9 bits (64), Expect = 2.3 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Frame = +3 Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755 P P G+ G + G +PGGF T G P +PP S+T+ GN++ Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624 Query: 756 TALRI 770 RI Sbjct: 625 KPERI 629 >AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-loop-helix leucinezipper WBSCR14-like protein protein. Length = 913 Score = 29.9 bits (64), Expect = 2.3 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Frame = +3 Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755 P P G+ G + G +PGGF T G P +PP S+T+ GN++ Sbjct: 469 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 528 Query: 756 TALRI 770 RI Sbjct: 529 KPERI 533 >Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical protein T06D8.9 protein. Length = 316 Score = 29.5 bits (63), Expect = 3.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +3 Query: 639 GAIGSPGGFPTYPGAPDPQPTYTEPP 716 G G PGG YP AP P Y++PP Sbjct: 196 GGGGGPGG---YPSAPPPYDDYSKPP 218 >Z83217-6|CAD59136.1| 128|Caenorhabditis elegans Hypothetical protein C10C6.7a protein. Length = 128 Score = 27.9 bits (59), Expect = 9.4 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +2 Query: 518 CRALLHSASSPYLLGWPALSSLSNGSAWALMRRSLRHTNG 637 C L ++ YL+ AL ++ G W L R S H NG Sbjct: 55 CFGTLRPQTAAYLICIAALHEITFGITWKLRRSSHIHPNG 94 >AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical protein Y37A1B.2d protein. Length = 564 Score = 27.9 bits (59), Expect = 9.4 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717 A+ P +W SE A PP+ G Q PTP++P Sbjct: 82 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115 >AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical protein Y37A1B.2c protein. Length = 566 Score = 27.9 bits (59), Expect = 9.4 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717 A+ P +W SE A PP+ G Q PTP++P Sbjct: 82 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115 >AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical protein Y37A1B.2b protein. Length = 592 Score = 27.9 bits (59), Expect = 9.4 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717 A+ P +W SE A PP+ G Q PTP++P Sbjct: 108 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 141 >AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical protein Y37A1B.2a protein. Length = 164 Score = 27.9 bits (59), Expect = 9.4 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717 A+ P +W SE A PP+ G Q PTP++P Sbjct: 82 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115 >AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical protein Y119C1B.12 protein. Length = 166 Score = 27.9 bits (59), Expect = 9.4 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +1 Query: 421 FCILGLLVFRWILLFVQCLGQ 483 +CILGL+VF +LL V C+ + Sbjct: 143 YCILGLIVFAILLLVVCCVAR 163 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,890,214 Number of Sequences: 27780 Number of extensions: 459069 Number of successful extensions: 1589 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1455 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1583 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2061488408 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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