Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1616
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40417-10|AAA81418.2| 247|Caenorhabditis elegans Synaptogyrin f... 50 2e-06
AF079373-1|AAC27798.1| 247|Caenorhabditis elegans synaptogyrin ... 50 2e-06
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 31 0.77
U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 30 1.8
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 30 2.3
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 30 2.3
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 30 2.3
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 30 2.3
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 30 2.3
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z83217-6|CAD59136.1| 128|Caenorhabditis elegans Hypothetical pr... 28 9.4
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 28 9.4
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 28 9.4
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 28 9.4
AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 28 9.4
AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical ... 28 9.4
>U40417-10|AAA81418.2| 247|Caenorhabditis elegans Synaptogyrin
family protein 1 protein.
Length = 247
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +2
Query: 263 CVYNDDTNACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFL 442
C+Y ++ C++ + A ++ IV + +Q+SSV TR+ VLADL SA + +
Sbjct: 60 CLYGRSSSTCSFATAVGFFAVCGAIVLIVLDAKMDQISSVPTRRRAVLADLVVSAIFTAI 119
Query: 443 YFVGF 457
+ +GF
Sbjct: 120 FLIGF 124
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 511 NNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 633
NN + I S AW AFFA++R+ G A P Y+
Sbjct: 147 NNAKFGILSALLSFLAWGGAAFFAWRRYEEGNQATHEPNYD 187
>AF079373-1|AAC27798.1| 247|Caenorhabditis elegans synaptogyrin
homolog protein.
Length = 247
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +2
Query: 263 CVYNDDTNACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFL 442
C+Y ++ C++ + A ++ IV + +Q+SSV TR+ VLADL SA + +
Sbjct: 60 CLYGRSSSTCSFATAVGFFAVCGAIVLIVLDAKMDQISSVPTRRRAVLADLVVSAIFTAI 119
Query: 443 YFVGF 457
+ +GF
Sbjct: 120 FLIGF 124
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 511 NNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 633
NN + I S AW AFFA++R+ G A P Y+
Sbjct: 147 NNAKFGILSALLSFLAWGGAAFFAWRRYEEGNQATHEPNYD 187
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 648 GSPGGFPTYPGAPDPQPTYTEPPFSQTA 731
G PGG P PG P+ Q EP Q A
Sbjct: 243 GGPGGMPAMPGMPNMQNLMNEPGLMQAA 270
>U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein
172, isoform a protein.
Length = 341
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 648 GSPGGFPTYPGAPDPQPTY 704
GS GG+ TYP AP PTY
Sbjct: 111 GSSGGYGTYPPAPTVPPTY 129
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 639 GAIGSPG--GFPTYPGAPDPQPTYTEPPFSQTAGNTGNMDYTALRI 770
G G PG G P YPG P +P F GN GN RI
Sbjct: 185 GLDGIPGRHGTPGYPGEPGLPGPVGDPGFDGKPGNPGNNGVRVRRI 230
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755
P P G+ G + G +PGGF T G P +PP S+T+ GN++
Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624
Query: 756 TALRI 770
RI
Sbjct: 625 KPERI 629
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755
P P G+ G + G +PGGF T G P +PP S+T+ GN++
Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624
Query: 756 TALRI 770
RI
Sbjct: 625 KPERI 629
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755
P P G+ G + G +PGGF T G P +PP S+T+ GN++
Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624
Query: 756 TALRI 770
RI
Sbjct: 625 KPERI 629
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755
P P G+ G + G +PGGF T G P +PP S+T+ GN++
Sbjct: 469 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 528
Query: 756 TALRI 770
RI
Sbjct: 529 KPERI 533
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 639 GAIGSPGGFPTYPGAPDPQPTYTEPP 716
G G PGG YP AP P Y++PP
Sbjct: 196 GGGGGPGG---YPSAPPPYDDYSKPP 218
>Z83217-6|CAD59136.1| 128|Caenorhabditis elegans Hypothetical
protein C10C6.7a protein.
Length = 128
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 518 CRALLHSASSPYLLGWPALSSLSNGSAWALMRRSLRHTNG 637
C L ++ YL+ AL ++ G W L R S H NG
Sbjct: 55 CFGTLRPQTAAYLICIAALHEITFGITWKLRRSSHIHPNG 94
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717
A+ P +W SE A PP+ G Q PTP++P
Sbjct: 82 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717
A+ P +W SE A PP+ G Q PTP++P
Sbjct: 82 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717
A+ P +W SE A PP+ G Q PTP++P
Sbjct: 108 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 141
>AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical
protein Y37A1B.2a protein.
Length = 164
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717
A+ P +W SE A PP+ G Q PTP++P
Sbjct: 82 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115
>AC006712-4|ABD63214.1| 166|Caenorhabditis elegans Hypothetical
protein Y119C1B.12 protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 421 FCILGLLVFRWILLFVQCLGQ 483
+CILGL+VF +LL V C+ +
Sbjct: 143 YCILGLIVFAILLLVVCCVAR 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,890,214
Number of Sequences: 27780
Number of extensions: 459069
Number of successful extensions: 1589
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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