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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1616
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40417-10|AAA81418.2|  247|Caenorhabditis elegans Synaptogyrin f...    50   2e-06
AF079373-1|AAC27798.1|  247|Caenorhabditis elegans synaptogyrin ...    50   2e-06
U41533-7|AAA83170.1|  337|Caenorhabditis elegans Small glutamine...    31   0.77 
U40060-1|AAA81141.1|  341|Caenorhabditis elegans Collagen protei...    30   1.8  
U80444-2|AAB37788.1|  305|Caenorhabditis elegans Collagen protei...    30   2.3  
U10401-4|AAN65289.1|  937|Caenorhabditis elegans Myc and mondo-l...    30   2.3  
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l...    30   2.3  
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto...    30   2.3  
AF213473-1|AAL50027.1|  913|Caenorhabditis elegans basic helix-l...    30   2.3  
Z49130-7|CAA88972.2|  316|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z83217-6|CAD59136.1|  128|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AL023835-4|CAD56254.1|  564|Caenorhabditis elegans Hypothetical ...    28   9.4  
AL023835-3|CAD56253.1|  566|Caenorhabditis elegans Hypothetical ...    28   9.4  
AL023835-2|CAA19487.2|  592|Caenorhabditis elegans Hypothetical ...    28   9.4  
AL023835-1|CAA19486.1|  164|Caenorhabditis elegans Hypothetical ...    28   9.4  
AC006712-4|ABD63214.1|  166|Caenorhabditis elegans Hypothetical ...    28   9.4  

>U40417-10|AAA81418.2|  247|Caenorhabditis elegans Synaptogyrin
           family protein 1 protein.
          Length = 247

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 21/65 (32%), Positives = 37/65 (56%)
 Frame = +2

Query: 263 CVYNDDTNACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFL 442
           C+Y   ++ C++   +   A   ++  IV +   +Q+SSV TR+  VLADL  SA +  +
Sbjct: 60  CLYGRSSSTCSFATAVGFFAVCGAIVLIVLDAKMDQISSVPTRRRAVLADLVVSAIFTAI 119

Query: 443 YFVGF 457
           + +GF
Sbjct: 120 FLIGF 124



 Score = 33.9 bits (74), Expect = 0.14
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 511 NNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 633
           NN +  I     S  AW   AFFA++R+  G  A   P Y+
Sbjct: 147 NNAKFGILSALLSFLAWGGAAFFAWRRYEEGNQATHEPNYD 187


>AF079373-1|AAC27798.1|  247|Caenorhabditis elegans synaptogyrin
           homolog protein.
          Length = 247

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 21/65 (32%), Positives = 37/65 (56%)
 Frame = +2

Query: 263 CVYNDDTNACNYGVGISVIAFIASVAFIVGEYLFEQMSSVKTRKHYVLADLGFSAFWAFL 442
           C+Y   ++ C++   +   A   ++  IV +   +Q+SSV TR+  VLADL  SA +  +
Sbjct: 60  CLYGRSSSTCSFATAVGFFAVCGAIVLIVLDAKMDQISSVPTRRRAVLADLVVSAIFTAI 119

Query: 443 YFVGF 457
           + +GF
Sbjct: 120 FLIGF 124



 Score = 33.9 bits (74), Expect = 0.14
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 511 NNMQGAIAFCFFSIFAWVACAFFAFQRFRMGADAAFAPAYE 633
           NN +  I     S  AW   AFFA++R+  G  A   P Y+
Sbjct: 147 NNAKFGILSALLSFLAWGGAAFFAWRRYEEGNQATHEPNYD 187


>U41533-7|AAA83170.1|  337|Caenorhabditis elegans Small
           glutamine-rich tetratricorepeat protein protein 1
           protein.
          Length = 337

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 648 GSPGGFPTYPGAPDPQPTYTEPPFSQTA 731
           G PGG P  PG P+ Q    EP   Q A
Sbjct: 243 GGPGGMPAMPGMPNMQNLMNEPGLMQAA 270


>U40060-1|AAA81141.1|  341|Caenorhabditis elegans Collagen protein
           172, isoform a protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 648 GSPGGFPTYPGAPDPQPTY 704
           GS GG+ TYP AP   PTY
Sbjct: 111 GSSGGYGTYPPAPTVPPTY 129


>U80444-2|AAB37788.1|  305|Caenorhabditis elegans Collagen protein
           58 protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
 Frame = +3

Query: 639 GAIGSPG--GFPTYPGAPDPQPTYTEPPFSQTAGNTGNMDYTALRI 770
           G  G PG  G P YPG P       +P F    GN GN      RI
Sbjct: 185 GLDGIPGRHGTPGYPGEPGLPGPVGDPGFDGKPGNPGNNGVRVRRI 230


>U10401-4|AAN65289.1|  937|Caenorhabditis elegans Myc and mondo-like
           protein 1, isoformb protein.
          Length = 937

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755
           P  P G+  G      + G   +PGGF    T  G P       +PP S+T+   GN++ 
Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624

Query: 756 TALRI 770
              RI
Sbjct: 625 KPERI 629


>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
           protein 1, isoforma protein.
          Length = 1009

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755
           P  P G+  G      + G   +PGGF    T  G P       +PP S+T+   GN++ 
Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624

Query: 756 TALRI 770
              RI
Sbjct: 625 KPERI 629


>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
           protein.
          Length = 1009

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755
           P  P G+  G      + G   +PGGF    T  G P       +PP S+T+   GN++ 
Sbjct: 565 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 624

Query: 756 TALRI 770
              RI
Sbjct: 625 KPERI 629


>AF213473-1|AAL50027.1|  913|Caenorhabditis elegans basic
           helix-loop-helix leucinezipper WBSCR14-like protein
           protein.
          Length = 913

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 585 PTVPHGR*CGVRSGIRMEGAIGSPGGFP---TYPGAPDPQPTYTEPPFSQTAGNTGNMDY 755
           P  P G+  G      + G   +PGGF    T  G P       +PP S+T+   GN++ 
Sbjct: 469 PQTPLGQLIGSADNGFLFGGNNTPGGFKMSGTTSGVPTLSQRLEQPPISRTSTIFGNVEN 528

Query: 756 TALRI 770
              RI
Sbjct: 529 KPERI 533


>Z49130-7|CAA88972.2|  316|Caenorhabditis elegans Hypothetical
           protein T06D8.9 protein.
          Length = 316

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 639 GAIGSPGGFPTYPGAPDPQPTYTEPP 716
           G  G PGG   YP AP P   Y++PP
Sbjct: 196 GGGGGPGG---YPSAPPPYDDYSKPP 218


>Z83217-6|CAD59136.1|  128|Caenorhabditis elegans Hypothetical
           protein C10C6.7a protein.
          Length = 128

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 518 CRALLHSASSPYLLGWPALSSLSNGSAWALMRRSLRHTNG 637
           C   L   ++ YL+   AL  ++ G  W L R S  H NG
Sbjct: 55  CFGTLRPQTAAYLICIAALHEITFGITWKLRRSSHIHPNG 94


>AL023835-4|CAD56254.1|  564|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2d protein.
          Length = 564

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717
           A+  P  +W   SE   A PP+ G Q    PTP++P
Sbjct: 82  ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115


>AL023835-3|CAD56253.1|  566|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2c protein.
          Length = 566

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717
           A+  P  +W   SE   A PP+ G Q    PTP++P
Sbjct: 82  ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115


>AL023835-2|CAA19487.2|  592|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2b protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717
           A+  P  +W   SE   A PP+ G Q    PTP++P
Sbjct: 108 ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 141


>AL023835-1|CAA19486.1|  164|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2a protein.
          Length = 164

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 610 AAFAPAYEWRARSEALEAFPPTQGLQTRSLPTPNLP 717
           A+  P  +W   SE   A PP+ G Q    PTP++P
Sbjct: 82  ASSRPFDDWGGASEV--AAPPSYGAQHHHQPTPSVP 115


>AC006712-4|ABD63214.1|  166|Caenorhabditis elegans Hypothetical
           protein Y119C1B.12 protein.
          Length = 166

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 421 FCILGLLVFRWILLFVQCLGQ 483
           +CILGL+VF  +LL V C+ +
Sbjct: 143 YCILGLIVFAILLLVVCCVAR 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,890,214
Number of Sequences: 27780
Number of extensions: 459069
Number of successful extensions: 1589
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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