Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1615X
         (401 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-P...    28   4.1  
BT030437-1|ABO52857.1|  566|Drosophila melanogaster IP18510p pro...    27   9.4  
AE014297-633|AAF53999.2| 1148|Drosophila melanogaster CG34127-PA...    27   9.4  
AE014134-2110|AAF53130.1|  126|Drosophila melanogaster CG14944-P...    27   9.4  

>AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-PA
           protein.
          Length = 804

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 207 VIQIHQN*RLRTRGPPSIGFDL 142
           ++QI  N +  TR PPSIG DL
Sbjct: 353 IVQIRDNIQAETRRPPSIGGDL 374


>BT030437-1|ABO52857.1|  566|Drosophila melanogaster IP18510p
           protein.
          Length = 566

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 151 TNRRRASRPKSLILMNLDNFCRSHGQVPATHLSNVALSTFDGS 279
           +N  R+SRP S    +  N+  +H Q+PA  LS+  ++T +G+
Sbjct: 123 SNSNRSSRPTSNNSNSNSNYSPNHDQLPA-QLSSRIINTRNGA 164


>AE014297-633|AAF53999.2| 1148|Drosophila melanogaster CG34127-PA
           protein.
          Length = 1148

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 151 TNRRRASRPKSLILMNLDNFCRSHGQVPATHLSNVALSTFDGS 279
           +N  R+SRP S    +  N+  +H Q+PA  LS+  ++T +G+
Sbjct: 123 SNSNRSSRPTSNNSNSNSNYSPNHDQLPA-QLSSRIINTRNGA 164


>AE014134-2110|AAF53130.1|  126|Drosophila melanogaster CG14944-PA
           protein.
          Length = 126

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 381 RLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES 265
           RL P      +S+AP P S+P  P  V  ++ A  T ++
Sbjct: 12  RLAPGTATPVMSRAPVPGSSPAVPAAVPAVLTARLTSDN 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,380,207
Number of Sequences: 53049
Number of extensions: 357586
Number of successful extensions: 1036
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)