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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1615X
         (401 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g07020.1 68415.m00803 protein kinase family protein contains ...    30   0.50 
At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mu...    29   1.2  
At3g17920.1 68416.m02282 leucine-rich repeat family protein cont...    29   1.5  
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica...    29   1.5  
At1g19670.1 68414.m02452 coronatine-responsive protein / coronat...    29   1.5  
At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3 d...    27   4.7  
At1g72560.1 68414.m08391 tRNA export mediator exportin-t, putati...    27   4.7  
At5g49310.1 68418.m06102 importin alpha-1 subunit, putative simi...    26   8.2  
At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) / ovule...    26   8.2  
At3g08510.1 68416.m00988 phosphoinositide-specific phospholipase...    26   8.2  
At1g32340.1 68414.m03985 zinc finger (C3HC4-type RING finger) fa...    26   8.2  

>At2g07020.1 68415.m00803 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 700

 Score = 30.3 bits (65), Expect = 0.50
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 199 DSSKLTTSDARPSVDWF*SNKSTHPITGQSSD 104
           DS     S  RPS+DWF  N+S +  +  SS+
Sbjct: 223 DSDLSFVSSDRPSMDWFEDNRSNYATSSSSSE 254


>At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate
           mutase family protein similar to X4 protein GI:21386798,
           Y4 protein GI:21386800 from  [Silene dioica]; contains
           Pfam profiles PF00300: phosphoglycerate mutase family,
           PF01535: PPR repeat
          Length = 1053

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +1

Query: 157 RRRASRPKSLILMNLDNFCRSHGQVPATHLSNVALSTFDGSFCDYH 294
           +R   +P S+I  +L   CR H  V    +S   L   D S C Y+
Sbjct: 842 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYY 887


>At3g17920.1 68416.m02282 leucine-rich repeat family protein
           contains leucine rich repeat (LRR) domains, Pfam:PF00560
          Length = 962

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 381 RLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAE 280
           RLLPSL VV+   +P+ +  P S LP + + V E
Sbjct: 84  RLLPSLKVVSSLPSPARDPTPLSLLPFSKLKVLE 117


>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
           to gi_3883128_gb_AAC77827
          Length = 133

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 372 PSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES 265
           PS    A + APSP +NP    P T   V++   ES
Sbjct: 39  PSQSPRATAPAPSPSANPPPSAPTTAPPVSQPPTES 74


>At1g19670.1 68414.m02452 coronatine-responsive protein /
           coronatine-induced protein 1 (CORI1) identical to
           coronatine-induced protein 1 (CORI1) GI:30912637 from
           [Arabidopsis thaliana]
          Length = 324

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = -2

Query: 316 FPVTRDNHGSR-RNYHRKLIRQHLKDASPVL-DHAICKSYPDSSKLTTSDARPSVDWF*S 143
           +PV    HG   RNY    +  H+     +L    +CK  P   ++   DA   ++W   
Sbjct: 56  YPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQVEVDDAGSVINWASE 115

Query: 142 NKSTHPITGQSSDCMY 95
           N   H  T  +++  Y
Sbjct: 116 NLKAHLPTSVNANGKY 131


>At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3
           domain-containing protein similar to SP|Q03387
           Eukaryotic initiation factor (iso)4F subunit P82-34
           (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam
           profiles PF02854: MIF4G domain, PF02847: MA3 domain
          Length = 747

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 316 FPVTRDNHGSRRNYHRKLIRQHLKDASPVLDHAI--CK 209
           FPV R+N G R  + R+ I QH +++  V D  +  CK
Sbjct: 46  FPVKRENSGERVRFSREEILQH-RESVQVSDEILRRCK 82


>At1g72560.1 68414.m08391 tRNA export mediator exportin-t, putative
           (PAUSED) contains Pfam profile: PF04150 exportin-t,
           identical to PAUSED gi:30909318
          Length = 988

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 13/54 (24%), Positives = 29/54 (53%)
 Frame = -3

Query: 228 LTMRSAKVIQIHQN*RLRTRGPPSIGFDLIKALIPSLVRVLIACISSRITTVIQ 67
           LT  + +V++ H+  RL +    ++  DL+  ++PS+  V+  C      +++Q
Sbjct: 304 LTGYAVEVLECHK--RLNSEDTKAVSMDLLNEVLPSVFYVMQKCEVDSTFSIVQ 355


>At5g49310.1 68418.m06102 importin alpha-1 subunit, putative similar
           to importin alpha-1 subunit (Karyopherin alpha-1
           subunit, KAP alpha) [Arabidopsis thaliana]
           SWISS-PROT:Q96321
          Length = 519

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 171 RGPPSIGFDLIKALIPSLVRVL 106
           RG PS  FDL+K ++P L R++
Sbjct: 228 RGKPSPPFDLVKHVLPVLKRLV 249


>At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) /
           ovule-specific homeobox protein A20 nearly identical to
           meristem L1 layer homeobox protein A20 (AtML1)
           [Arabidopsis thaliana] GI:1881536, protodermal factor2
           (PDF2) [Arabidopsis thaliana] GI:14276060
          Length = 762

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -2

Query: 364 GCGSRFSGSLSGIEP*FPVTRDNHGSRRNYHRKLIRQHLKDASPVLDHAICKSYPDSSKL 185
           G    ++G+L  +   F V      +R NY  +  +QH      V+D ++    P  S +
Sbjct: 360 GVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRP--SPI 417

Query: 184 TTSDARPS 161
           T S  RPS
Sbjct: 418 TRSRRRPS 425


>At3g08510.1 68416.m00988 phosphoinositide-specific phospholipase C
           (PLC2) identical to phosphoinositide specific
           phospholipase C(AtPLC2) GI:857374 [Arabidopsis thaliana]
          Length = 581

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -2

Query: 268 KLIRQHLKDASPVLDHAICKSYPDSSKLTTSDARPSVDW 152
           K   ++ K       H + + YP  +++T+S+  P V W
Sbjct: 354 KAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPLVGW 392


>At1g32340.1 68414.m03985 zinc finger (C3HC4-type RING finger)
           family protein contains a Zinc finger, C3HC4 type (RING
           finger) signature, PROSITE:PS00518
          Length = 688

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -2

Query: 304 RDNHG-SRRNYHRKLIRQHLKDASPVLDHAICKSYPDSSKLTTSD 173
           R  HG S RN+ R+ IR+     +PV DH   KS       T++D
Sbjct: 2   RGTHGGSGRNHDRRYIRRDAGIVNPVNDHP--KSEHQKEDTTSTD 44


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,887,621
Number of Sequences: 28952
Number of extensions: 171520
Number of successful extensions: 453
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 585758608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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