Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1613
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 138 1e-33
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 87 3e-18
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 84 2e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 73 3e-14
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 72 1e-13
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 71 2e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 71 2e-13
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 66 5e-12
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 55 1e-08
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 48 1e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 47 3e-06
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 46 5e-06
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 44 2e-05
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 40 3e-04
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 40 5e-04
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 39 7e-04
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 35 0.011
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.060
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 32 0.10
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 28 1.7
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 27 2.3
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 3.0
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 26 5.2
SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces ... 26 5.2
SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.9
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 138 bits (333), Expect = 1e-33
Identities = 67/109 (61%), Positives = 83/109 (76%)
Frame = +1
Query: 442 VGALLVYDIAKHLSYENVERWLPSCAIHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 621
VGAL+VYDI K S++NV RWL HAD NI+IMLVGNK+DL HLR++ TEEA+AFA
Sbjct: 84 VGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAA 143
Query: 622 ANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPT 768
N LSFIETSA+D++NVE AFQ +LTEI+RIVS R + +G + PT
Sbjct: 144 ENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG--VHPT 190
Score = 115 bits (277), Expect = 7e-27
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQIWDTAGQERYRAITSAYY
Sbjct: 21 VGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYY 80
Query: 434 RGA 442
RGA
Sbjct: 81 RGA 83
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 201 REDEYDYLFKVVLIGDSG 254
+EDEYDYLFK VLIGDSG
Sbjct: 3 QEDEYDYLFKTVLIGDSG 20
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 86.6 bits (205), Expect = 3e-18
Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GKS LL RF+ + F +TIG++F R+IE+DGK IK QIWDTAGQER+R IT+AYY
Sbjct: 20 VGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY 79
Query: 434 RGAWARCWF---TTSPSTCRTRTW 496
RGA T S RTW
Sbjct: 80 RGAMGILLLYDVTDKKSFDNVRTW 103
Score = 71.7 bits (168), Expect = 1e-13
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +1
Query: 442 VGALLVYDIAKHLSYENVERWLPSCAIHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 621
+G LL+YD+ S++NV W + HA +N+ +L+GNK D R + E+ +A A+
Sbjct: 83 MGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALAD 142
Query: 622 ANGLSFIETSALDSTNVEPAFQNILTEI 705
G+ F+E SA + NV+ AF + EI
Sbjct: 143 ELGVKFLEASAKTNVNVDEAFFTLAREI 170
Score = 28.7 bits (61), Expect = 0.98
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 213 YDYLFKVVLIGDSG 254
YDYL K++LIGDSG
Sbjct: 6 YDYLIKLLLIGDSG 19
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 83.8 bits (198), Expect = 2e-17
Identities = 38/63 (60%), Positives = 48/63 (76%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GKS LL RF + + STIGV+F R+ E++GKT+K QIWDTAGQER+R ITS+YY
Sbjct: 19 VGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYY 78
Query: 434 RGA 442
RGA
Sbjct: 79 RGA 81
Score = 71.7 bits (168), Expect = 1e-13
Identities = 35/87 (40%), Positives = 54/87 (62%)
Frame = +1
Query: 445 GALLVYDIAKHLSYENVERWLPSCAIHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 624
G ++VYD+ S+ NV++WL +A + + +LVGNKSD+ + + AK FA++
Sbjct: 83 GIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADS 142
Query: 625 NGLSFIETSALDSTNVEPAFQNILTEI 705
+ F+ETSA DSTNVE AF + +I
Sbjct: 143 LNIPFLETSAKDSTNVEQAFLTMSRQI 169
Score = 33.1 bits (72), Expect = 0.045
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 210 EYDYLFKVVLIGDSG 254
EYDYLFK++LIGDSG
Sbjct: 4 EYDYLFKLLLIGDSG 18
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 73.3 bits (172), Expect = 3e-14
Identities = 29/63 (46%), Positives = 47/63 (74%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GK+ L+++F +F+ E K+TIG +F T+ + VD K + Q+WDTAGQER++++ A+Y
Sbjct: 19 VGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFY 78
Query: 434 RGA 442
RGA
Sbjct: 79 RGA 81
Score = 30.7 bits (66), Expect = 0.24
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +1
Query: 451 LLVYDIAKHLSYENVERWLPSCAIHADQN---ILIMLVGNKSDL-RHLRSIPTEEAKAFA 618
++VY++ S+++VE W Q+ ++VGN+ D R++ A +
Sbjct: 85 VIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRALDYC 144
Query: 619 EA-NGLSFI--ETSALDSTNVEPAFQNI 693
++ +G + I E SA ++TNV F+ +
Sbjct: 145 KSKHGSNMIHFEASAKENTNVTDLFETV 172
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 71.7 bits (168), Expect = 1e-13
Identities = 27/63 (42%), Positives = 48/63 (76%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GK+S+++++ +F+ + K+TIG +F T+ + VD K + Q+WDTAGQER++++ A+Y
Sbjct: 19 VGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFY 78
Query: 434 RGA 442
RGA
Sbjct: 79 RGA 81
Score = 48.8 bits (111), Expect = 9e-07
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +1
Query: 451 LLVYDIAKHLSYENVERWLPSCAIHAD----QNILIMLVGNKSDLRHL-RSIPTEEAKAF 615
+LVYD+ S+E ++ W I A + +L+GNK D+ R + +A AF
Sbjct: 85 VLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSKALAF 144
Query: 616 AEANG-LSFIETSALDSTNVEPAFQNI 693
+A G + + ETSA ++ NV+ AF+ +
Sbjct: 145 CQARGEIPYFETSAKEAINVQEAFETV 171
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 70.5 bits (165), Expect = 2e-13
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQERYRAITSAY 430
+GKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWDTAGQERY+++ Y
Sbjct: 25 VGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMY 84
Query: 431 YRGA 442
YR A
Sbjct: 85 YRNA 88
Score = 56.4 bits (130), Expect = 4e-09
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 448 ALLVYDIAKHLSYENVERWLPSCAIHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFAEA 624
A++VYDI + S E + W+ A + I+I L GNK DL + R++ +A+A+A
Sbjct: 91 AIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAE 150
Query: 625 NGLSFIETSALDSTNVEPAFQNILTEI 705
L F ETSA + NV F I ++
Sbjct: 151 ANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 70.5 bits (165), Expect = 2e-13
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTIKAQIWDTAGQERYRAITS 424
GKS LL RF +N+++ + T+G++FA+R I V K IK QIWDTAGQE++R++
Sbjct: 21 GKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVAR 80
Query: 425 AYYRGA 442
YYRGA
Sbjct: 81 NYYRGA 86
Score = 64.9 bits (151), Expect = 1e-11
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 445 GALLVYDIAKHLSYENVERWLPSCAIHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 624
GA+LVYD+ S+E + WL A I ++L G+KSDL++ R + TEEA F
Sbjct: 88 GAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEFCSE 147
Query: 625 NGLSFI-ETSALDSTNVEPAFQNILTEI 705
+S ETS+ +NVE F ++++ I
Sbjct: 148 KHISSAHETSSYTGSNVEECFLSVVSTI 175
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 204 EDEYDYLFKVVLIGDSGWVKA 266
++ YDYL K+VL G SG K+
Sbjct: 3 KESYDYLVKIVLAGPSGTGKS 23
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 66.1 bits (154), Expect = 5e-12
Identities = 24/61 (39%), Positives = 49/61 (80%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQER+R++ +Y
Sbjct: 22 VGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 81
Query: 434 R 436
R
Sbjct: 82 R 82
Score = 62.5 bits (145), Expect = 6e-11
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +1
Query: 448 ALLVYDIAKHLSYENVERWLPSCAIHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 627
A++VYDI H S+ N E+W+ +++I+LVGNK+DL R + EE + A+
Sbjct: 87 AIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKEL 146
Query: 628 GLSFIETSALDSTNVEPAFQNI 693
+ +ETSA NV+ F+ I
Sbjct: 147 KIMHMETSAKAGHNVKLLFRKI 168
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 54.8 bits (126), Expect = 1e-08
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +1
Query: 412 RHHVGVLPRRVGALLVYDIAKHLSYENVERWLPSCAIHADQN-ILIMLVGNKSDLRHLRS 588
+H +G+ G +LVY I S+E V+ H + I++VGNKSDL R+
Sbjct: 73 KHSIGIH----GYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRA 128
Query: 589 IPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGD 753
+ EE KA A ++ E SA + NV AF+ I++EI ++Q P GD
Sbjct: 129 VTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI-----EKQANPSPPGD 178
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GKSSL ++ N F TI F+ ++I+ G+ +I DTAGQ+ Y + S +
Sbjct: 17 VGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDEYSILNSKHS 75
Query: 434 RG 439
G
Sbjct: 76 IG 77
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 48.0 bits (109), Expect = 1e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 436
GK+SLLS FT F E T+ + + VDGK+++ +WDTAGQE Y + Y
Sbjct: 20 GKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEEYERLRPMSYA 78
Query: 437 GA 442
A
Sbjct: 79 KA 80
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/59 (44%), Positives = 34/59 (57%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
GK+SLL+ FT+ F + TI E I VDG +I+ +WDTAGQE Y + S Y
Sbjct: 25 GKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSY 82
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 46.4 bits (105), Expect = 5e-06
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 445 GALLVYDIAKHLSYENVERWLPSCAIHADQNIL-IMLVGNKSDLRHLRSIPTEEAKAFAE 621
G LLVY+I S++ + + D++ ++LV NK DL R + E + A+
Sbjct: 82 GFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAK 141
Query: 622 ANGLSFIETSALDSTNVEPAFQNILTEIYR 711
+ ++ETSA NVE AF +++ I R
Sbjct: 142 SMHCLYVETSAKLRLNVEEAFYSLVRTIRR 171
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GKS+L + ++ F E TI + + E+DG+ + DTAGQE Y A+ Y
Sbjct: 19 VGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQEEYSAMREQYM 77
Query: 434 R 436
R
Sbjct: 78 R 78
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 409
+GK+SL+ + + F+ ES T+GV F ++I + I IWD GQ +
Sbjct: 21 IGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREF 72
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
GK++ + R EF + +T+GVE + I +WDTAGQE+ + YY
Sbjct: 21 GKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYY 79
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +1
Query: 451 LLVYDIAKHLSYENVERWLPSCAIHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANG 630
++++D+ ++Y+NV W + +NI I+L GNK D++ R + +A F
Sbjct: 86 IIMFDVTSRITYKNVPHWWRD-LVRVCENIPIVLCGNKVDVKE-RKVKA-KAITFHRKKN 142
Query: 631 LSFIETSALDSTNVEPAF 684
L + + SA + N E F
Sbjct: 143 LQYYDISAKSNYNFEKPF 160
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
GK+ LL F++ F T+ + +EVDG+ I+ +WDTAGQE Y + Y
Sbjct: 18 GKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTAGQEDYDRLRPLSY 75
Score = 29.1 bits (62), Expect = 0.74
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 451 LLVYDIAKHLSYENV-ERWLPSCAIHADQNILIMLVGNKSDLRH 579
L+ + + S +NV E+W+ S +H N+ I+LVG K DLR+
Sbjct: 82 LICFSVDAPESLDNVQEKWI-SEVLHFCSNLPILLVGCKVDLRN 124
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 39.1 bits (87), Expect = 7e-04
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
GK+ LL F++ F T+ + +EVDG+ ++ +WDTAGQE Y + Y
Sbjct: 18 GKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTAGQEDYDRLRPLSY 75
Score = 27.9 bits (59), Expect = 1.7
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Frame = +1
Query: 451 LLVYDIAKHLSYENV-ERWLPSCAIHADQNILIMLVGNKSDLR------------HLRSI 591
L+ + + S +NV E+W+ S +H ++ I+LV K+DLR + +
Sbjct: 82 LICFAVDSPDSLDNVQEKWI-SEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPV 140
Query: 592 PTEEAKAFAEANG-LSFIETSALDSTNVEPAFQN 690
TEE +A A+ G ++E SA + V F++
Sbjct: 141 TTEEGQAVAQKIGAYKYLECSAKTNEGVREVFES 174
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 35.1 bits (77), Expect = 0.011
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 436
GK+++L + N E T G F R++EV+G ++ IWD GQ+ R Y+
Sbjct: 28 GKTTILKCLLNEDVN-EVSPTFG--FQIRTLEVEG--LRFTIWDIGGQKTLRNFWKNYFE 82
Query: 437 GAWARCWFTTS 469
A W S
Sbjct: 83 STEAIIWVVDS 93
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 32.7 bits (71), Expect = 0.060
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 436
GK+++L + N+ ++ + T+G T V K IK +WD GQ++ R + Y+
Sbjct: 33 GKTTILYKLKLNQ-SVVTIPTVGFNVET----VTYKNIKFNVWDVGGQDKIRPLWRHYFT 87
Query: 437 G 439
G
Sbjct: 88 G 88
Score = 29.9 bits (64), Expect = 0.42
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 613 FAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRD 738
F GL F+ SA DS + A Q E++RI+S R+MRD
Sbjct: 86 FTGTKGLIFVVDSA-DSNRISEARQ----ELHRIISDREMRD 122
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATR-SIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
GK+ LL F+ F T+ + T + + K I+ +WDTAGQE Y + Y
Sbjct: 26 GKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSY 85
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 257 GKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYR 436
GK+++L + E + + TIG T V+ + I +WD GQ++ R + Y++
Sbjct: 29 GKTTILYKLKLGEI-VTTIPTIGFNVET----VEYRNISFTVWDVGGQDKIRPLWRHYFQ 83
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 218 LFVQSCTHWRFWLGKSSLLSRFTRNE--FNLESKSTIGVEFATRSIEVDGK 364
+FV+ TH W G+ S+ +RF E N + VE A + DGK
Sbjct: 274 IFVERKTHREDWTGEKSVKARFPLKEKYVNAFLRGDYTVEEAFAKMRKDGK 324
>SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1079
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 762 PDDVTLGRVAHLPLRHDPVD 703
P + LGRVA L + H PVD
Sbjct: 987 PQIIELGRVASLEMNHKPVD 1006
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 296 IHF**NATEDCFYPTRISNEYNFEQIIIF 210
IHF + C Y I N YNF ++ I+
Sbjct: 75 IHFRNHRNITCIYDLDIINPYNFNEVYIY 103
>SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 549 HDEDVLVGVDRAARQPSLHVLVRQVLGD 466
HD+++LVG QP HV+ +L D
Sbjct: 107 HDQEMLVGPRTKEGQPGYHVVTPFILDD 134
>SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 122
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 492 VLVRQVLGDVVNQQRAHAPR 433
VLVR+V G ++RAH PR
Sbjct: 65 VLVREVAGSFRQRKRAHMPR 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,915,546
Number of Sequences: 5004
Number of extensions: 57889
Number of successful extensions: 201
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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